UBERON:0001962
From FANTOM5_SSTAR
Name: | gut-associated lymphoid tissue | ||
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Namespace: | FANTOM | ||
Definition: | "Mucosa-associated lymphoid tissue in digestive tract. includes Peyer's patches, appendix, and solitary lymph nodules[GO]." [Wikipedia:Gut-associated_lymphoid_tissue] | ||
Xrefs: |
| ||
Synonyms: |
"GALT" RELATED [] "gut associated lymphoid tissue" EXACT [] | ||
Alt_id: | UBERON:FMA_62820-MA_0000136 | ||
Subset: | uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0001961(mucosa-associated lymphoid tissue) |
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part_of: | UBERON:0001555(digestive tract) |
Children
is a: | UBERON:0001735 (tonsillar ring),UBERON:0002372 (tonsil) |
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derives from: | FF:0011473 (mouse Follicle Associated Epithelium sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 10261-104C9
- 10262-104D1 (Follicle Associated Epithelium, pool2)
- 10263-104D2 (Follicle Associated Epithelium, pool3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001962 (gut-associated lymphoid tissue), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr12:115974938..115974945,-#_c13650ef59809a46b1740a1319424483 | -, p@chr12:115974938..115974945 |
1.87e-86 | FFCP PHASE1:Mm9::chr6:69701328..69701342,-#_c13650ef59809a46b1740a1319424483 | p1@ENSMUST00000114212 |
1.87e-86 | FFCP PHASE1:Mm9::chr8:23117055..23117056,-#_c13650ef59809a46b1740a1319424483 | p@chr8:23117055..23117056, - |
1.87e-86 | FFCP PHASE1:Mm9::chr6:69785263..69785268,-#_c13650ef59809a46b1740a1319424483 | p@chr6:69785263..69785268, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:116051009..116051016,-#_c13650ef59809a46b1740a1319424483 | p@chr12:116051009..116051016, - |
1.87e-86 | FFCP PHASE1:Mm9::chr19:38060099..38060102,+#_c13650ef59809a46b1740a1319424483 | p@chr19:38060099..38060102, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14201203..14201212,+#_c13650ef59809a46b1740a1319424483 | p@chr2:14201203..14201212, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:115979100..115979103,-#_c13650ef59809a46b1740a1319424483 | p@chr12:115979100..115979103, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:59564142..59564144,+#_c13650ef59809a46b1740a1319424483 | p@chr17:59564142..59564144, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:69086930..69086933,+#_c13650ef59809a46b1740a1319424483 | p@chr9:69086930..69086933, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:115974938..115974945,-#_c13650ef59809a46b1740a1319424483 | p@chr12:115974938..115974945, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:115979100..115979103,-#_c13650ef59809a46b1740a1319424483 | p@chr12:115979100..115979103, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:14201203..14201212,+#_c13650ef59809a46b1740a1319424483 | p@chr2:14201203..14201212, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:116051009..116051016,-#_c13650ef59809a46b1740a1319424483 | p@chr12:116051009..116051016, - |
1.87e-86 | FFCP PHASE2:Mm9::chr6:69701328..69701342,-#_c13650ef59809a46b1740a1319424483 | p1@ENSMUST00000114212 |
1.87e-86 | FFCP PHASE2:Mm9::chr8:23117055..23117056,-#_c13650ef59809a46b1740a1319424483 | p@chr8:23117055..23117056, - |
1.87e-86 | FFCP PHASE2:Mm9::chr6:69785263..69785268,-#_c13650ef59809a46b1740a1319424483 | p@chr6:69785263..69785268, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:59564142..59564144,+#_c13650ef59809a46b1740a1319424483 | p@chr17:59564142..59564144, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:69086930..69086933,+#_c13650ef59809a46b1740a1319424483 | +, p@chr9:69086930..69086933 |
1.87e-86 | FFCP PHASE2:Mm9::chr19:38060099..38060102,+#_c13650ef59809a46b1740a1319424483 | p@chr19:38060099..38060102, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:31038353..31038362,+#_c13650ef59809a46b1740a1319424483 | p@chr19:31038353..31038362, + |
1.87e-86 | FFCP PHASE2:Mm9::chr19:31038353..31038362,+#_c13650ef59809a46b1740a1319424483 | p@chr19:31038353..31038362, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:63059909..63059910,+#_c13650ef59809a46b1740a1319424483 | p@chr2:63059909..63059910, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:63059909..63059910,+#_c13650ef59809a46b1740a1319424483 | p@chr2:63059909..63059910, + |
1.68e-58 | FFCP PHASE2:Mm9::chr6:143591339..143591345,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr6:143591339..143591345, + |
1.68e-58 | FFCP PHASE2:Mm9::chr12:115366227..115366256,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr12:115366227..115366256, - |
1.68e-58 | FFCP PHASE2:Mm9::chr11:42881914..42881920,+#_05c5f8da60ffa7f44123d4a80c842124 | +, p@chr11:42881914..42881920 |
1.68e-58 | FFCP PHASE1:Mm9::chr16:15705318..15705342,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr16:15705318..15705342, + |
1.68e-58 | FFCP PHASE1:Mm9::chr2:45535559..45535562,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr2:45535559..45535562, + |
1.68e-58 | FFCP PHASE2:Mm9::chr6:28646564..28646565,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr6:28646564..28646565, - |
1.68e-58 | FFCP PHASE1:Mm9::chr6:143591339..143591345,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr6:143591339..143591345, + |
1.68e-58 | FFCP PHASE1:Mm9::chr19:32143349..32143352,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr19:32143349..32143352, - |
1.68e-58 | FFCP PHASE1:Mm9::chr1:40599829..40599836,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr1:40599829..40599836, + |
1.68e-58 | FFCP PHASE2:Mm9::chr16:15705318..15705342,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr16:15705318..15705342, + |
1.68e-58 | FFCP PHASE2:Mm9::chr8:25523566..25523573,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr8:25523566..25523573, + |
1.68e-58 | FFCP PHASE1:Mm9::chr6:28646564..28646565,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr6:28646564..28646565, - |
1.68e-58 | FFCP PHASE2:Mm9::chr1:40599829..40599836,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr1:40599829..40599836, + |
1.68e-58 | FFCP PHASE1:Mm9::chr12:115366227..115366256,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr12:115366227..115366256, - |
1.68e-58 | FFCP PHASE1:Mm9::chr8:25523566..25523573,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr8:25523566..25523573, + |
1.68e-58 | FFCP PHASE1:Mm9::chr11:42881914..42881920,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr11:42881914..42881920, + |
1.68e-58 | FFCP PHASE2:Mm9::chr2:45535559..45535562,+#_05c5f8da60ffa7f44123d4a80c842124 | p@chr2:45535559..45535562, + |
1.68e-58 | FFCP PHASE2:Mm9::chr19:32143349..32143352,-#_05c5f8da60ffa7f44123d4a80c842124 | p@chr19:32143349..32143352, - |
3.28e-58 | FFCP PHASE2:Mm9::chr2:21228521..21228523,+#_48ca9507b75c028b8615f9f63970b641 | p@chr2:21228521..21228523, + |
3.28e-58 | FFCP PHASE1:Mm9::chr2:21228521..21228523,+#_48ca9507b75c028b8615f9f63970b641 | p@chr2:21228521..21228523, + |
6.41e-58 | FFCP PHASE2:Mm9::chr14:11955268..11955270,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr14:11955268..11955270, + |
6.41e-58 | FFCP PHASE1:Mm9::chr14:11955268..11955270,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr14:11955268..11955270, + |
6.41e-58 | FFCP PHASE2:Mm9::chr19:44484947..44484956,-#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr19:44484947..44484956, - |
6.41e-58 | FFCP PHASE1:Mm9::chr19:44484947..44484956,-#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr19:44484947..44484956, - |
6.41e-58 | FFCP PHASE2:Mm9::chr7:151964837..151964841,-#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr7:151964837..151964841, - |
6.41e-58 | FFCP PHASE1:Mm9::chr7:151964837..151964841,-#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr7:151964837..151964841, - |
6.41e-58 | FFCP PHASE1:Mm9::chr12:114598121..114598167,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr12:114598121..114598167, + |
6.41e-58 | FFCP PHASE1:Mm9::chr6:115894954..115894961,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p1@H1foo |
6.41e-58 | FFCP PHASE2:Mm9::chr12:114598121..114598167,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr12:114598121..114598167, + |
6.41e-58 | FFCP PHASE2:Mm9::chr6:115894954..115894961,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p1@H1foo |
6.41e-58 | FFCP PHASE2:Mm9::chr8:107279610..107279613,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr8:107279610..107279613, + |
6.41e-58 | FFCP PHASE1:Mm9::chr8:107279610..107279613,+#_ce0b4ae4a2dc895e4f84885797d57ea8 | p@chr8:107279610..107279613, + |
1.66e-44 | FFCP PHASE2:Mm9::chr12:114545296..114545316,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p2@uc007pgn.1 |
1.66e-44 | FFCP PHASE2:Mm9::chr19:32144164..32144171,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr19:32144164..32144171, - |
1.66e-44 | FFCP PHASE2:Mm9::chr12:115694343..115694368,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p1@uc007pgz.1 |
1.66e-44 | FFCP PHASE2:Mm9::chr12:117248348..117248352,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p1@uc011yvj.1 |
1.66e-44 | FFCP PHASE1:Mm9::chr12:117248348..117248352,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p1@uc011yvj.1 |
1.66e-44 | FFCP PHASE1:Mm9::chr12:115694343..115694368,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p1@uc007pgz.1 |
1.66e-44 | FFCP PHASE1:Mm9::chr12:114545296..114545316,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p2@uc007pgn.1 |
1.66e-44 | FFCP PHASE1:Mm9::chr19:32144164..32144171,-#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr19:32144164..32144171, - |
1.66e-44 | FFCP PHASE2:Mm9::chr6:92256099..92256107,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr6:92256099..92256107, + |
1.66e-44 | FFCP PHASE2:Mm9::chrX:84015807..84015814,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chrX:84015807..84015814, + |
1.66e-44 | FFCP PHASE1:Mm9::chrX:84015807..84015814,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chrX:84015807..84015814, + |
1.66e-44 | FFCP PHASE2:Mm9::chr2:172818218..172818220,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr2:172818218..172818220, + |
1.66e-44 | FFCP PHASE1:Mm9::chr6:92256099..92256107,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr6:92256099..92256107, + |
1.66e-44 | FFCP PHASE1:Mm9::chr2:172818218..172818220,+#_fa2e87e05135f7d9b37c3ddb8cb57657 | p@chr2:172818218..172818220, + |
2.75e-44 | FFCP PHASE2:Mm9::chr14:120118559..120118564,+#_d81fbc1b486d68a8e6373c179aa7bb3b | p@chr14:120118559..120118564, + |
2.75e-44 | FFCP PHASE1:Mm9::chr14:120118559..120118564,+#_d81fbc1b486d68a8e6373c179aa7bb3b | p@chr14:120118559..120118564, + |
4.52e-44 | FFCP PHASE2:Mm9::chr5:41641845..41641846,+#_33449f409642c7a55f4cdb7d33d18cd5 | p@chr5:41641845..41641846, + |
4.52e-44 | FFCP PHASE1:Mm9::chr5:41641845..41641846,+#_33449f409642c7a55f4cdb7d33d18cd5 | p@chr5:41641845..41641846, + |
4.55e-44 | FFCP PHASE1:Mm9::chr13:101017287..101017298,-#_54c69a5664f80c5e0fb7627c7be159f3 | p1@Naip5 |
4.55e-44 | FFCP PHASE2:Mm9::chr12:114546123..114546134,-#_54c69a5664f80c5e0fb7627c7be159f3 | p@chr12:114546123..114546134, - |
4.55e-44 | FFCP PHASE1:Mm9::chr12:114498371..114498382,+#_54c69a5664f80c5e0fb7627c7be159f3 | p@chr12:114498371..114498382, + |
4.55e-44 | FFCP PHASE2:Mm9::chr13:101017287..101017298,-#_54c69a5664f80c5e0fb7627c7be159f3 | p1@Naip5 |
4.55e-44 | FFCP PHASE1:Mm9::chr12:114546123..114546134,-#_54c69a5664f80c5e0fb7627c7be159f3 | p@chr12:114546123..114546134, - |
4.55e-44 | FFCP PHASE2:Mm9::chr12:114498371..114498382,+#_54c69a5664f80c5e0fb7627c7be159f3 | p@chr12:114498371..114498382, + |
7.52e-44 | FFCP PHASE2:Mm9::chr12:114498387..114498408,+#_2e2c54a7c863afc94ca01b1a93377067 | p@chr12:114498387..114498408, + |
7.52e-44 | FFCP PHASE2:Mm9::chr7:18931147..18931163,-#_2e2c54a7c863afc94ca01b1a93377067 | p@chr7:18931147..18931163, - |
7.52e-44 | FFCP PHASE1:Mm9::chr12:116073906..116073921,-#_2e2c54a7c863afc94ca01b1a93377067 | p@chr12:116073906..116073921, - |
7.52e-44 | FFCP PHASE1:Mm9::chr12:114498387..114498408,+#_2e2c54a7c863afc94ca01b1a93377067 | p@chr12:114498387..114498408, + |
7.52e-44 | FFCP PHASE1:Mm9::chr7:18931147..18931163,-#_2e2c54a7c863afc94ca01b1a93377067 | p@chr7:18931147..18931163, - |
7.52e-44 | FFCP PHASE2:Mm9::chr12:116073906..116073921,-#_2e2c54a7c863afc94ca01b1a93377067 | p@chr12:116073906..116073921, - |
1.24e-43 | FFCP PHASE1:Mm9::chr6:92399181..92399191,+#_8e0d80dc6fc50c6494d1b11a38c8ad43 | p@chr6:92399181..92399191, + |
1.24e-43 | FFCP PHASE2:Mm9::chr6:92399181..92399191,+#_8e0d80dc6fc50c6494d1b11a38c8ad43 | p@chr6:92399181..92399191, + |
4.23e-36 | FFCP PHASE1:Mm9::chr8:24347491..24347492,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr8:24347491..24347492, + |
4.23e-36 | FFCP PHASE1:Mm9::chr14:120893824..120893825,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr14:120893824..120893825, + |
4.23e-36 | FFCP PHASE2:Mm9::chr13:100355619..100355622,-#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr13:100355619..100355622, - |
4.23e-36 | FFCP PHASE2:Mm9::chr14:120893824..120893825,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr14:120893824..120893825, + |
4.23e-36 | FFCP PHASE2:Mm9::chr3:146041906..146041910,-#_51b7846ff1e73c511e0ad0c3577ca6c7 | p1@Gm10636 |
4.23e-36 | FFCP PHASE2:Mm9::chr17:88262759..88262764,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr17:88262759..88262764, + |
4.23e-36 | FFCP PHASE2:Mm9::chr8:24347491..24347492,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr8:24347491..24347492, + |
4.23e-36 | FFCP PHASE1:Mm9::chr13:100355619..100355622,-#_51b7846ff1e73c511e0ad0c3577ca6c7 | p@chr13:100355619..100355622, - |
4.23e-36 | FFCP PHASE1:Mm9::chr3:146041906..146041910,-#_51b7846ff1e73c511e0ad0c3577ca6c7 | p1@Gm10636 |
4.23e-36 | FFCP PHASE1:Mm9::chr17:88262759..88262764,+#_51b7846ff1e73c511e0ad0c3577ca6c7 | +, p@chr17:88262759..88262764 |
9.52e-36 | FFCP PHASE1:Mm9::chr3:34057648..34057650,+#_7d3aa55c7a5dc47e3d12af677db9c283 | p@chr3:34057648..34057650, + |
9.52e-36 | FFCP PHASE2:Mm9::chr3:34057648..34057650,+#_7d3aa55c7a5dc47e3d12af677db9c283 | p@chr3:34057648..34057650, + |