UBERON:0002082

Name:	cardiac ventricle
Namespace:	FANTOM
Definition:	"Cardiac chamber which consists of a wall that surrounds the cavity of a ventricle." [FMA:7100]
Xrefs:	Expandlinks: AAO:0010249 BTO:0000862 EFO:0000317 EHDAA2:0004164 EHDAA:1912 EMAPA:17331 EV:0100020 FMA:7100 GAID:568 galen:Ventricle MA:0000091 MAT:0000497 MESH:A.07.541.560 ncithesaurus:Cardiac_Ventricle OpenCyc:Mx4rvVjj1pwpEbGdrcN5Y29ycA SCTID:277699000 TAO:0000009 VHOG:0000435 XAO:0003193 ZFA:0000009
Synonyms:	"heart ventricle" EXACT [] "lower chamber of heart" EXACT [] "ventricle" BROAD [] "ventricle of heart" EXACT []
Alt_id:	UBERON:FMA_7100-MA_0000091-ZFA_0000009
Subset:	uberon_slim vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

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Parents

is_a:	UBERON:0004151(cardiac chamber)
develops_from:	UBERON:0010226(future cardiac ventricle)

Children

is a:	UBERON:0002084 (heart left ventricle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

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Human (Homo sapiens)

• 10078-102A6 (left ventricle, adult, donor1)

Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002082 (cardiac ventricle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

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P-value	FFCP	Short description

P-value	FFCP	Short description
9.37e-99	FFCP PHASE2:Hg19::chr3:37061825..37061832,+	p@chr3:37061825..37061832, +
9.37e-99	FFCP PHASE1:Hg19::chr3:37061825..37061832,+	p@chr3:37061825..37061832, +
2.55e-98	FFCP PHASE2:Hg19::chr8:124033810..124033819,-	p@chr8:124033810..124033819, -
2.55e-98	FFCP PHASE1:Hg19::chr16:46766402..46766412,-	p@chr16:46766402..46766412, -
2.55e-98	FFCP PHASE1:Hg19::chr4:53417811..53417814,-	p@chr4:53417811..53417814, -
2.55e-98	FFCP PHASE2:Hg19::chr16:46766402..46766412,-	p@chr16:46766402..46766412, -
2.55e-98	FFCP PHASE2:Hg19::chr10:35032687..35032696,-	p@chr10:35032687..35032696, -
2.55e-98	FFCP PHASE1:Hg19::chr8:124033810..124033819,-	p@chr8:124033810..124033819, -
2.55e-98	FFCP PHASE2:Hg19::chr4:53417811..53417814,-	p@chr4:53417811..53417814, -
2.55e-98	FFCP PHASE1:Hg19::chr10:35032687..35032696,-	p@chr10:35032687..35032696, -
1.23e-66	FFCP PHASE1:Hg19::chr5:79030927..79030935,+	p49@CMYA5
1.23e-66	FFCP PHASE1:Hg19::chr3:46902281..46902288,-	p@chr3:46902281..46902288, -
1.23e-66	FFCP PHASE1:Hg19::chr5:79026919..79026926,+	p@chr5:79026919..79026926, +
1.23e-66	FFCP PHASE2:Hg19::chr3:46902281..46902288,-	p@chr3:46902281..46902288, -
1.23e-66	FFCP PHASE2:Hg19::chr5:79026919..79026926,+	p@chr5:79026919..79026926, +
1.23e-66	FFCP PHASE2:Hg19::chr5:79030927..79030935,+	p49@CMYA5
2.39e-66	FFCP PHASE2:Hg19::chr1:202431836..202431849,+	p18@PPP1R12B
2.39e-66	FFCP PHASE2:Hg19::chr1:164881611..164881641,-	p@chr1:164881611..164881641, -
2.39e-66	FFCP PHASE1:Hg19::chr16:46737348..46737351,-	p@chr16:46737348..46737351, -
2.39e-66	FFCP PHASE2:Hg19::chr7:35294320..35294351,+	p@chr7:35294320..35294351, +
2.39e-66	FFCP PHASE1:Hg19::chr18:6255319..6255336,-	p@chr18:6255319..6255336, -
2.39e-66	FFCP PHASE1:Hg19::chr12:660023..660044,+	p@chr12:660023..660044, +
2.39e-66	FFCP PHASE1:Hg19::chr1:202431911..202431922,+	p12@PPP1R12B
2.39e-66	FFCP PHASE1:Hg19::chr1:202431836..202431849,+	p18@PPP1R12B
2.39e-66	FFCP PHASE1:Hg19::chr22:18403223..18403228,-	p@chr22:18403223..18403228, -
2.39e-66	FFCP PHASE2:Hg19::chr16:46737348..46737351,-	p@chr16:46737348..46737351, -
2.39e-66	FFCP PHASE2:Hg19::chr12:660023..660044,+	p@chr12:660023..660044, +
2.39e-66	FFCP PHASE2:Hg19::chr1:202431911..202431922,+	p12@PPP1R12B
2.39e-66	FFCP PHASE1:Hg19::chr1:164881611..164881641,-	p@chr1:164881611..164881641, -
2.39e-66	FFCP PHASE1:Hg19::chr7:35294320..35294351,+	p@chr7:35294320..35294351, +
2.39e-66	FFCP PHASE2:Hg19::chr18:6255319..6255336,-	p@chr18:6255319..6255336, -
2.39e-66	FFCP PHASE2:Hg19::chr22:18403223..18403228,-	p@chr22:18403223..18403228, -
4.66e-66	FFCP PHASE2:Hg19::chr20:20069786..20069797,-	p@chr20:20069786..20069797, -
4.66e-66	FFCP PHASE1:Hg19::chr10:29812740..29812749,-	p@chr10:29812740..29812749, -
4.66e-66	FFCP PHASE2:Hg19::chr7:31933122..31933152,-	p@chr7:31933122..31933152, -
4.66e-66	FFCP PHASE2:Hg19::chr2:101878835..101878850,+	p16@C2orf29
4.66e-66	FFCP PHASE1:Hg19::chr4:26165179..26165190,+	p47@RBPJ
4.66e-66	FFCP PHASE1:Hg19::chr3:46901107..46901114,-	p@chr3:46901107..46901114, -
4.66e-66	FFCP PHASE2:Hg19::chr20:55732283..55732288,-	p@chr20:55732283..55732288, -
4.66e-66	FFCP PHASE1:Hg19::chr2:179581909..179581915,-	p@chr2:179581909..179581915, -
4.66e-66	FFCP PHASE1:Hg19::chr2:170374754..170374760,+	p@chr2:170374754..170374760, +
4.66e-66	FFCP PHASE1:Hg19::chr1:1154360..1154365,-	p@chr1:1154360..1154365, -
4.66e-66	FFCP PHASE2:Hg19::chr3:46901107..46901114,-	p@chr3:46901107..46901114, -
4.66e-66	FFCP PHASE1:Hg19::chr20:20069786..20069797,-	p@chr20:20069786..20069797, -
4.66e-66	FFCP PHASE1:Hg19::chr7:31933122..31933152,-	p@chr7:31933122..31933152, -
4.66e-66	FFCP PHASE2:Hg19::chr2:179581909..179581915,-	p@chr2:179581909..179581915, -
4.66e-66	FFCP PHASE2:Hg19::chr2:170374754..170374760,+	p@chr2:170374754..170374760, +
4.66e-66	FFCP PHASE2:Hg19::chr4:26165179..26165190,+	p47@RBPJ
4.66e-66	FFCP PHASE1:Hg19::chr20:55732283..55732288,-	p@chr20:55732283..55732288, -
4.66e-66	FFCP PHASE1:Hg19::chr2:101878835..101878850,+	p16@C2orf29
4.66e-66	FFCP PHASE2:Hg19::chr1:1154360..1154365,-	p@chr1:1154360..1154365, -
4.66e-66	FFCP PHASE2:Hg19::chr10:29812740..29812749,-	p@chr10:29812740..29812749, -
1.46e-50	FFCP PHASE2:Hg19::chr5:80555040..80555044,+	p@chr5:80555040..80555044, +
1.46e-50	FFCP PHASE2:Hg19::chr12:56091538..56091540,-	p@chr12:56091538..56091540, -
1.46e-50	FFCP PHASE1:Hg19::chr14:23893278..23893279,-	p41@MYH7
1.46e-50	FFCP PHASE1:Hg19::chr5:80555040..80555044,+	p@chr5:80555040..80555044, +
1.46e-50	FFCP PHASE2:Hg19::chr14:23893278..23893279,-	p41@MYH7
1.46e-50	FFCP PHASE1:Hg19::chr12:56091538..56091540,-	p@chr12:56091538..56091540, -
2.42e-50	FFCP PHASE1:Hg19::chr5:79028810..79028818,+	p50@CMYA5
2.42e-50	FFCP PHASE1:Hg19::chr2:109384584..109384612,+	p10@RANBP2
2.42e-50	FFCP PHASE1:Hg19::chr6:164383767..164383779,-	p@chr6:164383767..164383779, -
2.42e-50	FFCP PHASE2:Hg19::chr4:182186203..182186217,-	p1@ENST00000512547
2.42e-50	FFCP PHASE2:Hg19::chr1:202431859..202431868,+	p20@PPP1R12B
2.42e-50	FFCP PHASE1:Hg19::chr6:144329347..144329355,+	p@chr6:144329347..144329355, +
2.42e-50	FFCP PHASE1:Hg19::chr6:123760856..123760861,+	p4@ENST00000427828, p4@ENST00000434768
2.42e-50	FFCP PHASE2:Hg19::chr2:109384584..109384612,+	p10@RANBP2
2.42e-50	FFCP PHASE1:Hg19::chr2:220495902..220495903,+	p25@SLC4A3
2.42e-50	FFCP PHASE2:Hg19::chr6:164383767..164383779,-	p@chr6:164383767..164383779, -
2.42e-50	FFCP PHASE2:Hg19::chr5:79028810..79028818,+	p50@CMYA5
2.42e-50	FFCP PHASE1:Hg19::chr8:18708993..18709004,-	p@chr8:18708993..18709004, -
2.42e-50	FFCP PHASE2:Hg19::chr6:144329347..144329355,+	p@chr6:144329347..144329355, +
2.42e-50	FFCP PHASE1:Hg19::chr4:182186203..182186217,-	p1@ENST00000512547
2.42e-50	FFCP PHASE1:Hg19::chr1:202431859..202431868,+	p20@PPP1R12B
2.42e-50	FFCP PHASE1:Hg19::chr15:89647309..89647352,+	p@chr15:89647309..89647352, +
2.42e-50	FFCP PHASE2:Hg19::chr6:123760856..123760861,+	p4@ENST00000427828, p4@ENST00000434768
2.42e-50	FFCP PHASE2:Hg19::chr2:220495902..220495903,+	p25@SLC4A3
2.42e-50	FFCP PHASE2:Hg19::chr8:18708993..18709004,-	p@chr8:18708993..18709004, -
2.42e-50	FFCP PHASE2:Hg19::chr15:89647309..89647352,+	p@chr15:89647309..89647352, +
3.99e-50	FFCP PHASE1:Hg19::chr14:23854188..23854193,-	p@chr14:23854188..23854193, -
3.99e-50	FFCP PHASE1:Hg19::chr4:119953362..119953372,+	p@chr4:119953362..119953372, +
3.99e-50	FFCP PHASE2:Hg19::chr2:179414945..179414955,-	p@chr2:179414945..179414955, -
3.99e-50	FFCP PHASE1:Hg19::chr18:19769123..19769149,+	p@chr18:19769123..19769149, +
3.99e-50	FFCP PHASE1:Hg19::chr12:57112800..57112809,-	p@chr12:57112800..57112809, -
3.99e-50	FFCP PHASE1:Hg19::chr2:15679051..15679071,-	p@chr2:15679051..15679071, -
3.99e-50	FFCP PHASE1:Hg19::chr3:69168395..69168418,-	p@chr3:69168395..69168418, -
3.99e-50	FFCP PHASE2:Hg19::chr14:23854188..23854193,-	p@chr14:23854188..23854193, -
3.99e-50	FFCP PHASE2:Hg19::chr12:57112800..57112809,-	p@chr12:57112800..57112809, -
3.99e-50	FFCP PHASE1:Hg19::chr15:44172060..44172067,-	p@chr15:44172060..44172067, -
3.99e-50	FFCP PHASE2:Hg19::chr4:119953362..119953372,+	p@chr4:119953362..119953372, +
3.99e-50	FFCP PHASE2:Hg19::chr2:15679051..15679071,-	p@chr2:15679051..15679071, -
3.99e-50	FFCP PHASE2:Hg19::chr3:69168395..69168418,-	p@chr3:69168395..69168418, -
3.99e-50	FFCP PHASE2:Hg19::chr15:44172060..44172067,-	p@chr15:44172060..44172067, -
3.99e-50	FFCP PHASE2:Hg19::chr18:19769123..19769149,+	p@chr18:19769123..19769149, +
3.99e-50	FFCP PHASE1:Hg19::chr2:179414945..179414955,-	p@chr2:179414945..179414955, -
6.58e-50	FFCP PHASE1:Hg19::chr7:107121368..107121392,-	p10@COG5
6.58e-50	FFCP PHASE2:Hg19::chr9:38311053..38311058,+	p@chr9:38311053..38311058, +
6.58e-50	FFCP PHASE1:Hg19::chr2:179454262..179454272,-	p@chr2:179454262..179454272, -
6.58e-50	FFCP PHASE1:Hg19::chr1:11906020..11906041,+	p@chr1:11906020..11906041, +
6.58e-50	FFCP PHASE1:Hg19::chr22:31489401..31489412,+	p38@SMTN
6.58e-50	FFCP PHASE1:Hg19::chr2:179417310..179417315,-	p@chr2:179417310..179417315, -

Showing 1 to 100 of 100 entries

Property "Property value" (as page type) with input value "UBPROP:0000001 "A chamber of the heart that receives blood from one or more atria and pumps it by muscular contraction into the arteries.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "One of four heart chambers.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.