UBERON:0002102
From FANTOM5_SSTAR
Name: | forelimb | |
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Namespace: | FANTOM | |
Definition: | "A (free) limb that is connected to a pectoral girdle. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pectoral girdle and its parts." [UBERONREF:0000003, Wikipedia:Forelimb] | |
Xrefs: |
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Synonyms: |
"anteriormost limb" EXACT [] "fore limb" EXACT [] "foreleg" RELATED [] "forelimb" EXACT [] "free part of upper limb" EXACT [FMA:24878] "free upper limb" EXACT [FMA:24878, UBERONREF:0000003] "membrum superius" EXACT [FMA:7183, FMA:TA] "pectoral limb" EXACT [] "superior member" EXACT [] "upper extremity" EXACT [] "upper limb" EXACT [] | |
Comments: | AO notes: note that this corresponds to FMA:'free upper limb' (a limb segment), NOT 'upper limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Usage notes: Note distinction between arm and forelimb. hand is part of forelimb, but not part of arm | |
Alt_id: | UBERON:FMA_7183-MA_0000025-MIAA_0000394-XAO_0003030 | |
Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0002101(limb),UBERON:0004710(pectoral appendage) |
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develops_from: | UBERON:0005417(forelimb bud) |
part_of: | UBERON:0010708(pectoral complex),UBERON:0000153(anterior region of body),UBERON:0010708(pectoral complex) |
Children
is a: | UBERON:0000024 (forelimb wing) |
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derives from: | FF:0011277 (mouse forelimb- embryo E17 sample),FF:0011278 (mouse forelimb- embryo E18 sample),FF:0011314 (mouse forelimb- embryo E11 sample),FF:0011322 (mouse forelimb- embryo E12 sample),FF:0011331 (mouse forelimb- embryo E13 sample),FF:0011342 (mouse forelimb- embryo E14 sample),FF:0011351 (mouse forelimb- embryo E15 sample) |
part of: | UBERON:0002398 (manus),UBERON:0003531 (forelimb skin),UBERON:0008785 (upper limb segment) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10286-104F7 (Skin - palm, donor1)
- 10314-104I8
- 10342-105C9
- 1517-43C4 (forelimb, embryo E17)
- 1520-43B5 (forelimb, embryo E18)
- 335-25E2 (forelimb, embryo E11)
- 359-14H2 (forelimb, embryo E12)
- 384-1E2 (forelimb, embryo E13)
- 413-26A8 (forelimb, embryo E14)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002102 (forelimb), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Upper limb, which connects the manus with the pectoral girdle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.