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UBERON:0002102

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Name:forelimb
Namespace:FANTOM
Definition:"A (free) limb that is connected to a pectoral girdle. The extent of this structure includes autopod, stylopod and zeugopod regions when present, but excludes the pectoral girdle and its parts." [UBERONREF:0000003, Wikipedia:Forelimb]
Xrefs:
links:

AAO:0000205
BTO:0001729
EFO:0000882
EHDAA2:0002133
EHDAA:6208
EMAPA:17412
EV:0100014
FMA:24878
GAID:1215
GAID:51
galen:UpperExtremity
MA:0000025
MAT:0000394
MESH:A.13.395
MIAA:0000394
ncithesaurus:Upper_Extremity
SCTID:182245002
VHOG:0000338
VSAO:0000148

XAO:0003030
Synonyms: "anteriormost limb" EXACT []
"fore limb" EXACT []
"foreleg" RELATED []
"forelimb" EXACT []
"free part of upper limb" EXACT [FMA:24878]
"free upper limb" EXACT [FMA:24878, UBERONREF:0000003]
"membrum superius" EXACT [FMA:7183, FMA:TA]
"pectoral limb" EXACT []
"superior member" EXACT []
"upper extremity" EXACT []
"upper limb" EXACT []
Comments:AO notes: note that this corresponds to FMA:'free upper limb' (a limb segment), NOT 'upper limb'. Both MA and FMA consider shoulder (and shoulder bones) part of upper limb. Usage notes: Note distinction between arm and forelimb. hand is part of forelimb, but not part of arm
Alt_id: UBERON:FMA_7183-MA_0000025-MIAA_0000394-XAO_0003030
Subset: uberon_slim

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0002101(limb),UBERON:0004710(pectoral appendage)
develops_from:UBERON:0005417(forelimb bud)
part_of:UBERON:0010708(pectoral complex),UBERON:0000153(anterior region of body),UBERON:0010708(pectoral complex)



Children

is a:UBERON:0000024 (forelimb wing)
derives from:FF:0011277 (mouse forelimb- embryo E17 sample),FF:0011278 (mouse forelimb- embryo E18 sample),FF:0011314 (mouse forelimb- embryo E11 sample),FF:0011322 (mouse forelimb- embryo E12 sample),FF:0011331 (mouse forelimb- embryo E13 sample),FF:0011342 (mouse forelimb- embryo E14 sample),FF:0011351 (mouse forelimb- embryo E15 sample)
part of:UBERON:0002398 (manus),UBERON:0003531 (forelimb skin),UBERON:0008785 (upper limb segment)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002102 (forelimb), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Upper limb, which connects the manus with the pectoral girdle.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.