UBERON:0002224
From FANTOM5_SSTAR
Name: | thoracic cavity | ||
---|---|---|---|
Definition: | "Body cavity subdivision which is enclosed by the thoracic wall and the diaphragm[FMA]." [FMA:7565, Wikipedia:Thoracic_cavity] | ||
Xrefs: |
| ||
Synonyms: |
"cavitas thoracis" RELATED LATIN [Wikipedia:Thoracic_cavity] "cavity of chest" EXACT [] "cavity of thorax" EXACT [] "chest cavity" EXACT [] "pectoral cavity" EXACT [] "space of thoracic compartment" EXACT [FMA:7565] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: | UBERON:FMA_7565-MA_0000032 | ||
Subset: | uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0000464(anatomical space) |
---|---|
part_of: | UBERON:0000915(thoracic segment of trunk) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
... further results Mouse (Mus musculus)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002224 (thoracic cavity), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.21e-66 | FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_859d9428304bd19141808240624fa87c | p4@Tbx4 |
1.21e-66 | FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_859d9428304bd19141808240624fa87c | p4@Tbx4 |
4.71e-66 | FFCP PHASE2:Mm9::chr9:20829911..20829920,+#_3837079dac416688b8789d438e306dfb | p@chr9:20829911..20829920, + |
4.71e-66 | FFCP PHASE1:Mm9::chr9:20829911..20829920,+#_3837079dac416688b8789d438e306dfb | p@chr9:20829911..20829920, + |
1.06e-62 | FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_d32ba4677b69ee6e6e73eac9b78e827b | p1@ENSMUST00000134305 |
1.06e-62 | FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_d32ba4677b69ee6e6e73eac9b78e827b | p1@ENSMUST00000134305 |
1.52e-61 | FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_f2f5617d136e09b5481c77631ac37ee4 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
1.52e-61 | FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_f2f5617d136e09b5481c77631ac37ee4 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
1.91e-61 | FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_8f98a1f7227a21901febbc34b6a9db35 | p6@Tbx4 |
1.91e-61 | FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_8f98a1f7227a21901febbc34b6a9db35 | p6@Tbx4 |
5.56e-61 | FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr12:57636003..57636017, - |
5.56e-61 | FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr12:57598716..57598720, - |
5.56e-61 | FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr11:59457994..59457997, - |
5.56e-61 | FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr11:59457994..59457997, - |
5.56e-61 | FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr4:138812977..138812992, + |
5.56e-61 | FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr12:57636003..57636017, - |
5.56e-61 | FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr8:94878479..94878503, - |
5.56e-61 | FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr8:94878479..94878503, - |
5.56e-61 | FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr12:57598716..57598720, - |
5.56e-61 | FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_c3443aba2ca4b839eda120fa9d5f05b1 | p@chr4:138812977..138812992, + |
1.35e-60 | FFCP PHASE1:Mm9::chr7:56809246..56809272,+#_ed81ffebede32ebd3f2a4fac56863515 | p9@Nav2 |
1.35e-60 | FFCP PHASE2:Mm9::chr7:56809246..56809272,+#_ed81ffebede32ebd3f2a4fac56863515 | p9@Nav2 |
2.87e-58 | FFCP PHASE1:Mm9::chr12:57633887..57633899,-#_23dac743503944ec29f7c34ba3ef3325 | p@chr12:57633887..57633899, - |
2.87e-58 | FFCP PHASE2:Mm9::chr12:57633887..57633899,-#_23dac743503944ec29f7c34ba3ef3325 | p@chr12:57633887..57633899, - |
1.23e-57 | FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_9ff8cec9238281e169bcde136e90a87b | p8@Nkx2-1 |
1.23e-57 | FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_9ff8cec9238281e169bcde136e90a87b | p8@Nkx2-1 |
1.37e-57 | FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_88906dfd972e7ab7b956927451eef9bf | p2@E030019B13Rik |
1.37e-57 | FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_88906dfd972e7ab7b956927451eef9bf | p2@E030019B13Rik |
1.53e-57 | FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_ea3760e9f21dd29931b5f6aa8084187c | p10@Nebl |
1.53e-57 | FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_ea3760e9f21dd29931b5f6aa8084187c | p10@Nebl |
1.7e-57 | FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_a3a38306070d4f999d2f69d61d549868 | p9@Nkx2-1 |
1.7e-57 | FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_a3a38306070d4f999d2f69d61d549868 | p9@Nkx2-1 |
1.79e-56 | FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_6b97a59df3d6a761c6806184384f5732 | p@chr12:57598537..57598547, - |
1.79e-56 | FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_6b97a59df3d6a761c6806184384f5732 | p3@Trpm6 |
1.79e-56 | FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_6b97a59df3d6a761c6806184384f5732 | p@chr12:57598537..57598547, - |
1.79e-56 | FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_6b97a59df3d6a761c6806184384f5732 | p3@E030019B13Rik |
1.79e-56 | FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_6b97a59df3d6a761c6806184384f5732 | p3@E030019B13Rik |
1.79e-56 | FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_6b97a59df3d6a761c6806184384f5732 | p3@Trpm6 |
2.01e-56 | FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_b5f8a56f9e4a3b427668e90825dbceda | p@chr14:115241755..115241762, - |
2.01e-56 | FFCP PHASE2:Mm9::chr12:57636278..57636289,+#_b5f8a56f9e4a3b427668e90825dbceda | p@chr12:57636278..57636289, + |
2.01e-56 | FFCP PHASE1:Mm9::chr12:57636278..57636289,+#_b5f8a56f9e4a3b427668e90825dbceda | p@chr12:57636278..57636289, + |
2.01e-56 | FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_b5f8a56f9e4a3b427668e90825dbceda | p@chr14:115241755..115241762, - |
2.24e-56 | FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_f61f38e6567ad7a000b0a1119a933cfc | p@chr4:138812999..138813015, + |
2.24e-56 | FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_f61f38e6567ad7a000b0a1119a933cfc | p@chr4:138812999..138813015, + |
3.93e-56 | FFCP PHASE1:Mm9::chr1:40522810..40522820,+#_686e0d46c5b3e348edf725a07b14a820 | p7@Il18r1 |
3.93e-56 | FFCP PHASE2:Mm9::chr1:40522810..40522820,+#_686e0d46c5b3e348edf725a07b14a820 | p7@Il18r1 |
6.2e-56 | FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr14:70922576..70922589, - |
6.2e-56 | FFCP PHASE1:Mm9::chr2:164374820..164374835,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr2:164374820..164374835, - |
6.2e-56 | FFCP PHASE2:Mm9::chr2:164374820..164374835,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr2:164374820..164374835, - |
6.2e-56 | FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr14:70921265..70921285, - |
6.2e-56 | FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr1:184610062..184610074, + |
6.2e-56 | FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr2:66524237..66524246, - |
6.2e-56 | FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr1:184610062..184610074, + |
6.2e-56 | FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_5f0420dfc5b024a513381ed2a58e6e0a | p3@Sftpb |
6.2e-56 | FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr14:70922576..70922589, - |
6.2e-56 | FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_5f0420dfc5b024a513381ed2a58e6e0a | p4@Sftpb |
6.2e-56 | FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_5f0420dfc5b024a513381ed2a58e6e0a | p4@Sftpb |
6.2e-56 | FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr14:70921265..70921285, - |
6.2e-56 | FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_5f0420dfc5b024a513381ed2a58e6e0a | p@chr2:66524237..66524246, - |
6.2e-56 | FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_5f0420dfc5b024a513381ed2a58e6e0a | p3@Sftpb |
9.42e-56 | FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_b9306ccc777d97e736b5604a5e136f2d | p@chr5:120282691..120282701, + |
9.42e-56 | FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_b9306ccc777d97e736b5604a5e136f2d | p@chr5:120282691..120282701, + |
1.34e-54 | FFCP PHASE2:Mm9::chr12:57636911..57636924,-#_5f8673f67f37b01aa16c67c80cb900f2 | p@chr12:57636911..57636924, - |
1.34e-54 | FFCP PHASE1:Mm9::chr12:57636911..57636924,-#_5f8673f67f37b01aa16c67c80cb900f2 | p@chr12:57636911..57636924, - |
3.97e-54 | FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_d965edf235911f154d1f89b5dd1a7f31 | p4@E030019B13Rik |
3.97e-54 | FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_d965edf235911f154d1f89b5dd1a7f31 | p4@E030019B13Rik |
1.46e-52 | FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_cd38cdd5778e1fa4d564712f3829bee0 | p@chr12:57623172..57623185, - |
1.46e-52 | FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_cd38cdd5778e1fa4d564712f3829bee0 | p@chr12:57623172..57623185, - |
1.46e-52 | FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_cd38cdd5778e1fa4d564712f3829bee0 | p@chr14:70922007..70922052, + |
1.46e-52 | FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_cd38cdd5778e1fa4d564712f3829bee0 | p@chr14:70922007..70922052, + |
1.62e-52 | FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_82fbaba8853d0cce23bf4635614c4fef | p@chr5:28785436..28785450, - |
1.62e-52 | FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_82fbaba8853d0cce23bf4635614c4fef | p@chr5:28785436..28785450, - |
1.8e-52 | FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_835d2299b49b49ece29dbe3ee3399e8b | p@chr14:70922459..70922482, - |
1.8e-52 | FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_835d2299b49b49ece29dbe3ee3399e8b | p@chr14:70922459..70922482, - |
5.65e-52 | FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_8a9fa8864d0b2beda64472c862613ef1 | p4@Etv5 |
5.65e-52 | FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_8a9fa8864d0b2beda64472c862613ef1 | p4@Etv5 |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72264418..72264441, + |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72264890..72264911, + |
1.97e-51 | FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr12:57376690..57376716, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72259797..72259814, + |
1.97e-51 | FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr14:70923240..70923251, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72264418..72264441, + |
1.97e-51 | FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr14:70923240..70923251, - |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72259797..72259814, + |
1.97e-51 | FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_da8e811de2c5ebb927b04b23cd71e26c | p4@Lamp3 |
1.97e-51 | FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr14:70922486..70922510, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72264890..72264911, + |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72263977..72263993, + |
1.97e-51 | FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_da8e811de2c5ebb927b04b23cd71e26c | p4@Lamp3 |
1.97e-51 | FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr14:70922486..70922510, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_da8e811de2c5ebb927b04b23cd71e26c | p@chr6:72263977..72263993, + |
1.97e-51 | FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_da8e811de2c5ebb927b04b23cd71e26c | p@chr12:57376690..57376716, - |
2.21e-51 | FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_060ad69b9fab15f934603d1783d9dc8b | p@chr6:72264609..72264653, - |
2.21e-51 | FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_060ad69b9fab15f934603d1783d9dc8b | p@chr6:72264609..72264653, - |
2.47e-51 | FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_60d31842c16e39655fdf7f2ab10462f8 | p@chr6:129378567..129378573, - |
2.47e-51 | FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_60d31842c16e39655fdf7f2ab10462f8 | p@chr6:129378567..129378573, - |
3.74e-51 | FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_1371e4046b37ba645a2f4bd9d56d595d | p16@Pde5a |
3.74e-51 | FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_1371e4046b37ba645a2f4bd9d56d595d | p16@Pde5a |
5.44e-51 | FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_b29d61876da7e7d634b7289010705f2a | p7@Nkx2-1 |
5.44e-51 | FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_b29d61876da7e7d634b7289010705f2a | p7@Nkx2-1 |