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UBERON:0003703

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Name:extrahepatic bile duct
Namespace:FANTOM
Definition:"the passages external to the liver for the conveyance of bile." [MP:0009498]
Xrefs:
links:

FMA:14678
GAID:281
MA:0002659
MESH:A.03.159.183.079
ncithesaurus:Extrahepatic_Bile_Duct

SCTID:276158002
Synonyms: "bile duct extrahepatic part" RELATED [MA:0002659]
"extrahepatic biliary system" RELATED [GAID:281]
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0002394(bile duct)



Children

is a:UBERON:0001174 (common bile duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

  • 10417-106C3 (papillotubular adenocarcinoma cell line:TGBC18TKB)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003703 (extrahepatic bile duct), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr19:15923954..15923958,-#_a098cdc2924682874b59bfe8e62ded0ep@chr19:15923954..15923958, -
5.42e-195FFCP PHASE1:Hg19::chr7:98796685..98796688,-#_a098cdc2924682874b59bfe8e62ded0ep@chr7:98796685..98796688, -
5.42e-195FFCP PHASE2:Hg19::chr19:49545691..49545692,+#_a098cdc2924682874b59bfe8e62ded0ep@chr19:49545691..49545692, +
5.42e-195FFCP PHASE2:Hg19::chr7:98807901..98807908,-#_a098cdc2924682874b59bfe8e62ded0ep@chr7:98807901..98807908, -
5.42e-195FFCP PHASE1:Hg19::chr7:99779265..99779276,+#_a098cdc2924682874b59bfe8e62ded0ep15@STAG3
5.42e-195FFCP PHASE1:Hg19::chr19:15923954..15923958,-#_a098cdc2924682874b59bfe8e62ded0ep@chr19:15923954..15923958, -
5.42e-195FFCP PHASE2:Hg19::chr7:98796685..98796688,-#_a098cdc2924682874b59bfe8e62ded0ep@chr7:98796685..98796688, -
5.42e-195FFCP PHASE2:Hg19::chr15:20093569..20093572,+#_a098cdc2924682874b59bfe8e62ded0ep@chr15:20093569..20093572, +
5.42e-195FFCP PHASE2:Hg19::chr7:99779265..99779276,+#_a098cdc2924682874b59bfe8e62ded0ep15@STAG3
5.42e-195FFCP PHASE1:Hg19::chr19:49545691..49545692,+#_a098cdc2924682874b59bfe8e62ded0ep@chr19:49545691..49545692, +
5.42e-195FFCP PHASE1:Hg19::chr7:98807901..98807908,-#_a098cdc2924682874b59bfe8e62ded0ep@chr7:98807901..98807908, -
5.42e-195FFCP PHASE1:Hg19::chr15:20093569..20093572,+#_a098cdc2924682874b59bfe8e62ded0ep@chr15:20093569..20093572, +
9.37e-99FFCP PHASE2:Hg19::chr3:139035972..139036016,-#_c0aceda25608ad2f38c0fe4de50a7588p@chr3:139035972..139036016, -
9.37e-99FFCP PHASE2:Hg19::chr7:98595103..98595105,-#_c0aceda25608ad2f38c0fe4de50a7588p@chr7:98595103..98595105, -
9.37e-99FFCP PHASE2:Hg19::chr19:49545646..49545652,+#_c0aceda25608ad2f38c0fe4de50a7588p@chr19:49545646..49545652, +
9.37e-99FFCP PHASE1:Hg19::chr3:139035972..139036016,-#_c0aceda25608ad2f38c0fe4de50a7588p@chr3:139035972..139036016, -
9.37e-99FFCP PHASE1:Hg19::chr19:49545646..49545652,+#_c0aceda25608ad2f38c0fe4de50a7588p@chr19:49545646..49545652, +
9.37e-99FFCP PHASE1:Hg19::chr7:98595103..98595105,-#_c0aceda25608ad2f38c0fe4de50a7588p@chr7:98595103..98595105, -
2.55e-98FFCP PHASE1:Hg19::chr11:69867159..69867175,-#_7ef2d81038af2048d85b5f1ce872e9f8p3@ENST00000528507
2.55e-98FFCP PHASE1:Hg19::chr2:40184895..40184905,-#_7ef2d81038af2048d85b5f1ce872e9f8-, p@chr2:40184895..40184905
2.55e-98FFCP PHASE1:Hg19::chr7:98870790..98870795,+#_7ef2d81038af2048d85b5f1ce872e9f8p7@MYH16
2.55e-98FFCP PHASE2:Hg19::chr7:98870980..98870981,+#_7ef2d81038af2048d85b5f1ce872e9f8p8@MYH16
2.55e-98FFCP PHASE2:Hg19::chr11:69867159..69867175,-#_7ef2d81038af2048d85b5f1ce872e9f8p3@ENST00000528507
2.55e-98FFCP PHASE2:Hg19::chr13:23368290..23368299,+#_7ef2d81038af2048d85b5f1ce872e9f8p@chr13:23368290..23368299, +
2.55e-98FFCP PHASE2:Hg19::chr22:30653778..30653783,-#_7ef2d81038af2048d85b5f1ce872e9f8p@chr22:30653778..30653783, -
2.55e-98FFCP PHASE2:Hg19::chr7:98870790..98870795,+#_7ef2d81038af2048d85b5f1ce872e9f8p7@MYH16
2.55e-98FFCP PHASE2:Hg19::chr20:61339609..61339610,+#_7ef2d81038af2048d85b5f1ce872e9f8p@chr20:61339609..61339610, +
2.55e-98FFCP PHASE1:Hg19::chr22:30653778..30653783,-#_7ef2d81038af2048d85b5f1ce872e9f8p@chr22:30653778..30653783, -
2.55e-98FFCP PHASE1:Hg19::chr20:61339609..61339610,+#_7ef2d81038af2048d85b5f1ce872e9f8p@chr20:61339609..61339610, +
2.55e-98FFCP PHASE1:Hg19::chr13:23368290..23368299,+#_7ef2d81038af2048d85b5f1ce872e9f8p@chr13:23368290..23368299, +
2.55e-98FFCP PHASE1:Hg19::chr7:98870980..98870981,+#_7ef2d81038af2048d85b5f1ce872e9f8p8@MYH16
2.55e-98FFCP PHASE2:Hg19::chr7:150037547..150037552,-#_7ef2d81038af2048d85b5f1ce872e9f8p10@RARRES2
2.55e-98FFCP PHASE1:Hg19::chr7:150037547..150037552,-#_7ef2d81038af2048d85b5f1ce872e9f8p10@RARRES2
2.55e-98FFCP PHASE2:Hg19::chr2:40184895..40184905,-#_7ef2d81038af2048d85b5f1ce872e9f8p@chr2:40184895..40184905, -
1.23e-66FFCP PHASE2:Hg19::chr6:1054763..1054800,-#_8eb07627df64b75029751f3383172d8ap@chr6:1054763..1054800, -
1.23e-66FFCP PHASE2:Hg19::chr19:51462404..51462413,-#_8eb07627df64b75029751f3383172d8ap@chr19:51462404..51462413, -
1.23e-66FFCP PHASE1:Hg19::chr6:1054763..1054800,-#_8eb07627df64b75029751f3383172d8ap@chr6:1054763..1054800, -
1.23e-66FFCP PHASE2:Hg19::chr13:107026326..107026335,-#_8eb07627df64b75029751f3383172d8ap@chr13:107026326..107026335, -
1.23e-66FFCP PHASE2:Hg19::chr4:143369478..143369483,-#_8eb07627df64b75029751f3383172d8a-, p@chr4:143369478..143369483
1.23e-66FFCP PHASE1:Hg19::chr19:49545674..49545685,+#_8eb07627df64b75029751f3383172d8ap@chr19:49545674..49545685, +
1.23e-66FFCP PHASE1:Hg19::chr4:143369478..143369483,-#_8eb07627df64b75029751f3383172d8ap@chr4:143369478..143369483, -
1.23e-66FFCP PHASE1:Hg19::chr13:107026326..107026335,-#_8eb07627df64b75029751f3383172d8ap@chr13:107026326..107026335, -
1.23e-66FFCP PHASE2:Hg19::chr19:49545674..49545685,+#_8eb07627df64b75029751f3383172d8ap@chr19:49545674..49545685, +
1.23e-66FFCP PHASE1:Hg19::chr19:51462404..51462413,-#_8eb07627df64b75029751f3383172d8ap@chr19:51462404..51462413, -
2.39e-66FFCP PHASE2:Hg19::chr3:170626681..170626687,+#_d490dbc54e5bb9ecaca328f4a59dbfedp@chr3:170626681..170626687, +
2.39e-66FFCP PHASE1:Hg19::chr7:98870435..98870449,+#_d490dbc54e5bb9ecaca328f4a59dbfedp6@MYH16
2.39e-66FFCP PHASE2:Hg19::chr7:98870435..98870449,+#_d490dbc54e5bb9ecaca328f4a59dbfedp6@MYH16
2.39e-66FFCP PHASE1:Hg19::chr3:170626681..170626687,+#_d490dbc54e5bb9ecaca328f4a59dbfedp@chr3:170626681..170626687, +
4.66e-66FFCP PHASE2:Hg19::chr20:56234717..56234758,-#_03f5353bb40942df8e5c2ddd289b8a69p@chr20:56234717..56234758, -
4.66e-66FFCP PHASE1:Hg19::chr20:56234717..56234758,-#_03f5353bb40942df8e5c2ddd289b8a69p@chr20:56234717..56234758, -
4.66e-66FFCP PHASE1:Hg19::chr10:114885594..114885600,+#_03f5353bb40942df8e5c2ddd289b8a69p@chr10:114885594..114885600, +
4.66e-66FFCP PHASE2:Hg19::chr10:114885594..114885600,+#_03f5353bb40942df8e5c2ddd289b8a69+, p@chr10:114885594..114885600
1.46e-50FFCP PHASE1:Hg19::chr17:70636802..70636818,+#_a5729199e468281f43f71c21af6b7f71p@chr17:70636802..70636818, +
1.46e-50FFCP PHASE1:Hg19::chr7:98740685..98740699,-#_a5729199e468281f43f71c21af6b7f71p@chr7:98740685..98740699, -
1.46e-50FFCP PHASE1:Hg19::chr19:51471381..51471383,-#_a5729199e468281f43f71c21af6b7f71p14@KLK6
1.46e-50FFCP PHASE2:Hg19::chr19:51471381..51471383,-#_a5729199e468281f43f71c21af6b7f71p14@KLK6
1.46e-50FFCP PHASE2:Hg19::chr17:70636802..70636818,+#_a5729199e468281f43f71c21af6b7f71p@chr17:70636802..70636818, +
1.46e-50FFCP PHASE2:Hg19::chr7:98740685..98740699,-#_a5729199e468281f43f71c21af6b7f71-, p@chr7:98740685..98740699
2.42e-50FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_5f8d5931be1e691ce8c49cb53f8ac968p3@MYH16
2.42e-50FFCP PHASE2:Hg19::chr6:128815342..128815347,-#_5f8d5931be1e691ce8c49cb53f8ac968p@chr6:128815342..128815347, -
2.42e-50FFCP PHASE1:Hg19::chr10:5501962..5501964,+#_5f8d5931be1e691ce8c49cb53f8ac968p@chr10:5501962..5501964, +
2.42e-50FFCP PHASE1:Hg19::chr15:42186162..42186197,-#_5f8d5931be1e691ce8c49cb53f8ac968p1@SPTBN5
2.42e-50FFCP PHASE2:Hg19::chr10:5652876..5652885,-#_5f8d5931be1e691ce8c49cb53f8ac968p5@ENST00000425246
2.42e-50FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_5f8d5931be1e691ce8c49cb53f8ac968p4@MYH16
2.42e-50FFCP PHASE1:Hg19::chr22:43343242..43343291,-#_5f8d5931be1e691ce8c49cb53f8ac968p20@PACSIN2
2.42e-50FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_5f8d5931be1e691ce8c49cb53f8ac968p3@MYH16
2.42e-50FFCP PHASE2:Hg19::chr15:42186162..42186197,-#_5f8d5931be1e691ce8c49cb53f8ac968p1@SPTBN5
2.42e-50FFCP PHASE2:Hg19::chr10:5501962..5501964,+#_5f8d5931be1e691ce8c49cb53f8ac968p@chr10:5501962..5501964, +
2.42e-50FFCP PHASE2:Hg19::chr22:43343242..43343291,-#_5f8d5931be1e691ce8c49cb53f8ac968p20@PACSIN2
2.42e-50FFCP PHASE1:Hg19::chr10:5652876..5652885,-#_5f8d5931be1e691ce8c49cb53f8ac968p5@ENST00000425246
2.42e-50FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_5f8d5931be1e691ce8c49cb53f8ac968p4@MYH16
2.42e-50FFCP PHASE1:Hg19::chr6:128815342..128815347,-#_5f8d5931be1e691ce8c49cb53f8ac968p@chr6:128815342..128815347, -
6.58e-50FFCP PHASE1:Hg19::chr1:46954560..46954569,+#_abcb3f677b707dd7050c9508f5f5ff3bp@chr1:46954560..46954569, +
6.58e-50FFCP PHASE1:Hg19::chr10:101691084..101691100,-#_abcb3f677b707dd7050c9508f5f5ff3bp8@DNMBP
6.58e-50FFCP PHASE1:Hg19::chr19:51523347..51523358,-#_abcb3f677b707dd7050c9508f5f5ff3bp11@KLK10
6.58e-50FFCP PHASE2:Hg19::chr1:46954560..46954569,+#_abcb3f677b707dd7050c9508f5f5ff3bp@chr1:46954560..46954569, +
6.58e-50FFCP PHASE1:Hg19::chr10:101691118..101691135,-#_abcb3f677b707dd7050c9508f5f5ff3bp6@DNMBP
6.58e-50FFCP PHASE2:Hg19::chr19:51523347..51523358,-#_abcb3f677b707dd7050c9508f5f5ff3bp11@KLK10
6.58e-50FFCP PHASE2:Hg19::chr10:101691084..101691100,-#_abcb3f677b707dd7050c9508f5f5ff3bp8@DNMBP
6.58e-50FFCP PHASE2:Hg19::chr8:139755835..139755842,-#_abcb3f677b707dd7050c9508f5f5ff3b-, p@chr8:139755835..139755842
6.58e-50FFCP PHASE2:Hg19::chr10:101691118..101691135,-#_abcb3f677b707dd7050c9508f5f5ff3bp6@DNMBP
6.58e-50FFCP PHASE1:Hg19::chr8:139755835..139755842,-#_abcb3f677b707dd7050c9508f5f5ff3bp@chr8:139755835..139755842, -
6.62e-41FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_6326a64d223aac8035eb2ac2b3ab1551p@chr10:30046722..30046725, -
6.62e-41FFCP PHASE1:Hg19::chr10:5652892..5652903,-#_6326a64d223aac8035eb2ac2b3ab1551p2@ENST00000425246
6.62e-41FFCP PHASE1:Hg19::chr3:98671855..98671858,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr3:98671855..98671858, +
6.62e-41FFCP PHASE1:Hg19::chr3:139253550..139253585,+#_6326a64d223aac8035eb2ac2b3ab1551+, p@chr3:139253550..139253585
6.62e-41FFCP PHASE1:Hg19::chr7:98805698..98805708,-#_6326a64d223aac8035eb2ac2b3ab1551p@chr7:98805698..98805708, -
6.62e-41FFCP PHASE1:Hg19::chr17:47091824..47091833,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr17:47091824..47091833, +
6.62e-41FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_6326a64d223aac8035eb2ac2b3ab1551p@chr10:30046722..30046725, -
6.62e-41FFCP PHASE1:Hg19::chr9:132337391..132337396,+#_6326a64d223aac8035eb2ac2b3ab1551p2@ENST00000443993, p2@uc004bya.1
6.62e-41FFCP PHASE2:Hg19::chr9:132337391..132337396,+#_6326a64d223aac8035eb2ac2b3ab1551p2@ENST00000443993, p2@uc004bya.1
6.62e-41FFCP PHASE2:Hg19::chr3:139253550..139253585,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr3:139253550..139253585, +
6.62e-41FFCP PHASE2:Hg19::chr3:98671855..98671858,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr3:98671855..98671858, +
6.62e-41FFCP PHASE2:Hg19::chr10:5652892..5652903,-#_6326a64d223aac8035eb2ac2b3ab1551p2@ENST00000425246
6.62e-41FFCP PHASE2:Hg19::chr2:30440814..30440823,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr2:30440814..30440823, +
6.62e-41FFCP PHASE2:Hg19::chr7:98805698..98805708,-#_6326a64d223aac8035eb2ac2b3ab1551-, p@chr7:98805698..98805708
6.62e-41FFCP PHASE2:Hg19::chr17:47091824..47091833,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr17:47091824..47091833, +
6.62e-41FFCP PHASE1:Hg19::chr2:30440814..30440823,+#_6326a64d223aac8035eb2ac2b3ab1551p@chr2:30440814..30440823, +
9.91e-41FFCP PHASE2:Hg19::chr8:143317560..143317581,-#_7a762aad9e38728688329e08020585afp@chr8:143317560..143317581, -
9.91e-41FFCP PHASE1:Hg19::chr8:143317560..143317581,-#_7a762aad9e38728688329e08020585afp@chr8:143317560..143317581, -

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