Personal tools

UBERON:0004068

From FANTOM5_SSTAR

Jump to: navigation, search

Name:medial nasal prominence
Namespace:FANTOM
Definition:"the central area of the two limbs of a horseshoe-shaped mesenchymal swelling that lie medial to the olfactory placode or pit in the future nasal region of the embryo; it joins with the ipsilateral maxillary prominence in the formation of half of the upper jaw, and the nasal tip and philtrum of the upper lip develop from it" [MP:0009903, Wikipedia:Medial_nasal_prominence]
Xrefs:
links:

EHDAA2:0001076
EHDAA:4792
EMAPA:16808
[ Gray45.png Gray45.png]
[ 200px-Gray45.png 200px-Gray45.png]
SCTID:308877001

VHOG:0000804
Synonyms: "medial nasal process" EXACT [EHDAA2:0001076]
"medial nasal swelling" RELATED [UBERON:cjm]
"medial-nasal process" EXACT [EMAPA:16808]
"prominentia nasalis medialis" RELATED LATIN [Wikipedia:Medial_nasal_prominence]
Comments:Fusion of right and left medial nasal processes forms a primary palate rostrally and the nasal septum caudally. The incisive bone, including upper incisor teeth and the rostral up- per lip, are derived from the primary palate. The nasal septum consists of bone, cartilage, and a patch of soft tissue membrane that separates right & left halves of the nasal cavity.

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0009292(embryonic nasal process)
develops_from:UBERON:0004066(frontonasal prominence)
part_of:UBERON:0004066(frontonasal prominence)



Children

develops from:UBERON:0002244 (premaxilla),UBERON:0009714 (intermaxillary process)
part of:UBERON:0009204 (medial nasal process mesenchyme)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004068 (medial nasal prominence), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_e7888f951fa5b3a2d6f091221ace75f8p14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_e7888f951fa5b3a2d6f091221ace75f8p14@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_8398cd078995ef00c9d3e2349ecba4a7p13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_8398cd078995ef00c9d3e2349ecba4a7p13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_8398cd078995ef00c9d3e2349ecba4a7p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_8398cd078995ef00c9d3e2349ecba4a7p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_8398cd078995ef00c9d3e2349ecba4a7p12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_8398cd078995ef00c9d3e2349ecba4a7p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_8398cd078995ef00c9d3e2349ecba4a7p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_8398cd078995ef00c9d3e2349ecba4a7p11@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_559b5fffb8393e88b665c3164e4a4fd2p14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_559b5fffb8393e88b665c3164e4a4fd2p@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_559b5fffb8393e88b665c3164e4a4fd2p@chr5:75912402..75912418, -
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_559b5fffb8393e88b665c3164e4a4fd2p14@MAB21L2
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_a65b239a19a1371f9251261b8be1413dp@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_a65b239a19a1371f9251261b8be1413dp@chr4:151505582..151505614, +
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_31a5e65b73e9c6566acda085fe88faddp@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_31a5e65b73e9c6566acda085fe88faddp17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_31a5e65b73e9c6566acda085fe88faddp17@RSRC1
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_31a5e65b73e9c6566acda085fe88faddp9@C17orf67
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_31a5e65b73e9c6566acda085fe88faddp9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_31a5e65b73e9c6566acda085fe88faddp@chr8:57354278..57354286, +
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_b742943219657d24356176e539ee6be0p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_b742943219657d24356176e539ee6be0p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_1e379f060416f61b8f669cf7f9c359f6p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_1e379f060416f61b8f669cf7f9c359f6p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_1e379f060416f61b8f669cf7f9c359f6p1@AK123925
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_1e379f060416f61b8f669cf7f9c359f6p1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_1e379f060416f61b8f669cf7f9c359f6p7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_1e379f060416f61b8f669cf7f9c359f6p7@ALX1
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_51eb1bcb3e44c23267d1493bb7563ae2p@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_51eb1bcb3e44c23267d1493bb7563ae2p23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_51eb1bcb3e44c23267d1493bb7563ae2p23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_51eb1bcb3e44c23267d1493bb7563ae2p@chr2:33519090..33519092, +
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_8c8acca2ef2a2f16a75bb15b8429a26bp@chr8:57353666..57353675, -
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_50a6d50d983fe738833c2ad4ad2217aap8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_50a6d50d983fe738833c2ad4ad2217aap12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_50a6d50d983fe738833c2ad4ad2217aap12@FAM65C
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_50a6d50d983fe738833c2ad4ad2217aap2@TAS1R1
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_50a6d50d983fe738833c2ad4ad2217aap2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_50a6d50d983fe738833c2ad4ad2217aap8@LHX8
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_8566b691e6539af00c669910fe41eda8p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_8566b691e6539af00c669910fe41eda8p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_8566b691e6539af00c669910fe41eda8p@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_8566b691e6539af00c669910fe41eda8p@chr5:75912831..75912842, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_f41c60dbf4409a7179933002f84f1bcap@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_f41c60dbf4409a7179933002f84f1bcap@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_f41c60dbf4409a7179933002f84f1bcap@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_f41c60dbf4409a7179933002f84f1bcap@chr6:46190219..46190230, -
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_0f98aa1b99add1a6669fc8a0bea41a86p5@PENK
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_0f98aa1b99add1a6669fc8a0bea41a86p@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_0f98aa1b99add1a6669fc8a0bea41a86p@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_0f98aa1b99add1a6669fc8a0bea41a86p4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_0f98aa1b99add1a6669fc8a0bea41a86p4@CPZ
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_0f98aa1b99add1a6669fc8a0bea41a86p5@PENK
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_8d9087886202f983aff6161a9f5dfc86p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_8d9087886202f983aff6161a9f5dfc86p9@SIX1
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_b132fde8ff47b5c5b3b07dfab3136b08p@chr6:134327986..134327991, -
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_b132fde8ff47b5c5b3b07dfab3136b08p@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_f1837af39106d6beb3919b63a22b627ap@chr8:57353676..57353688, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_f1837af39106d6beb3919b63a22b627ap@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_f1837af39106d6beb3919b63a22b627ap@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_f1837af39106d6beb3919b63a22b627ap@chr8:57353676..57353688, -
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p12@FBN2
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p@chr5:19721484..19721507, -
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p12@FBN2
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_7ae4e9f552f6c5f0da54a1e61bbe3411p@chr5:19721484..19721507, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_25a0aabb9176297b35075862778c9df7p@chr8:57353982..57353991, -
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_25a0aabb9176297b35075862778c9df7p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_25a0aabb9176297b35075862778c9df7p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_25a0aabb9176297b35075862778c9df7p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_25a0aabb9176297b35075862778c9df7p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_25a0aabb9176297b35075862778c9df7p@chr8:57353982..57353991, -
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_b02eaaa16ca2d1d001ad684f0a606d6dp7@SHOX2
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_b02eaaa16ca2d1d001ad684f0a606d6dp10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_b02eaaa16ca2d1d001ad684f0a606d6dp10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_b02eaaa16ca2d1d001ad684f0a606d6dp7@SHOX2
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_7267cbf65add6ed28cd30ed339376eb8p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_7267cbf65add6ed28cd30ed339376eb8p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_7267cbf65add6ed28cd30ed339376eb8p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_7267cbf65add6ed28cd30ed339376eb8p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_7267cbf65add6ed28cd30ed339376eb8p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_7267cbf65add6ed28cd30ed339376eb8p@chrX:132670143..132670152, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_3077d72413c2d8133f99bc1636ac01dap@chr1:21904551..21904569, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_3077d72413c2d8133f99bc1636ac01dap@chr1:21904551..21904569, -
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_3f0a5b687f56aceb8e0ef48f68511763p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_3f0a5b687f56aceb8e0ef48f68511763p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_3f0a5b687f56aceb8e0ef48f68511763p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_3f0a5b687f56aceb8e0ef48f68511763p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_3f0a5b687f56aceb8e0ef48f68511763p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_3f0a5b687f56aceb8e0ef48f68511763p@chr14:89044406..89044416, +
4.2e-29FFCP PHASE1:Hg19::chr1:6615468..6615485,+#_34a62d468acba3fd5cceaa067c2e876bp1@TAS1R1
4.2e-29FFCP PHASE2:Hg19::chr13:36046127..36046134,+#_34a62d468acba3fd5cceaa067c2e876bp@chr13:36046127..36046134, +