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UBERON:0004708

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Name:paired limb/fin
Namespace:FANTOM
Xrefs:
links:
VSAO:0000067
Synonyms: "girdle-associated appendage" EXACT [UBERON:cjm]
"jointed paired lateral appendage" NARROW [UBERON:cjm]
"limb or fin" EXACT [UBERON:cjm]
"paired appendage" EXACT [VSAO:0000067]
"pectoral or pelvic appendage" EXACT [UBERON:cjm]
"pelvic/pectoral appendage" EXACT [UBERON:cjm]
Comments:this class is the union of the classes limb, pectoral fin and pelvic fin.
Alt_id: UBERON:0009872

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000026(appendage)
develops_from:UBERON:0004357(paired limb/fin bud)
part_of:UBERON:0010707(appendage girdle complex)



Children

is a:UBERON:0002101 (limb),UBERON:0004709 (pelvic appendage),UBERON:0004710 (pectoral appendage)
part of:UBERON:0004375 (bone of free limb or fin),UBERON:0010538 (paired limb/fin segment),UBERON:0011582 (paired limb/fin skeleton)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004708 (paired limb/fin), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data