UBERON:0004708
From FANTOM5_SSTAR
Name: | paired limb/fin | |
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Namespace: | FANTOM | |
Xrefs: |
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Synonyms: |
"girdle-associated appendage" EXACT [UBERON:cjm] "jointed paired lateral appendage" NARROW [UBERON:cjm] "limb or fin" EXACT [UBERON:cjm] "paired appendage" EXACT [VSAO:0000067] "pectoral or pelvic appendage" EXACT [UBERON:cjm] "pelvic/pectoral appendage" EXACT [UBERON:cjm] | |
Comments: | this class is the union of the classes limb, pectoral fin and pelvic fin. | |
Alt_id: | UBERON:0009872 |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000026(appendage) |
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develops_from: | UBERON:0004357(paired limb/fin bud) |
part_of: | UBERON:0010707(appendage girdle complex) |
Children
is a: | UBERON:0002101 (limb),UBERON:0004709 (pelvic appendage),UBERON:0004710 (pectoral appendage) |
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part of: | UBERON:0004375 (bone of free limb or fin),UBERON:0010538 (paired limb/fin segment),UBERON:0011582 (paired limb/fin skeleton) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10264-104D3
- 10267-104D6
- 10273-104E3
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
... further results Mouse (Mus musculus)
- 10232-103I7 (chicken wing buds, day03 (HH20))
- 10264-104D3
- 10267-104D6
- 10273-104E3
- 10281-104F2
- 10282-104F3 (skeletal muscle - soleus muscle, donor1)
- 10285-104F6
- 10286-104F7 (Skin - palm, donor1)
- 10292-104G4 (achilles tendon, donor2)
- 10295-104G7 (cruciate ligament, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004708 (paired limb/fin), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data