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UBERON:0004874

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Name:somatopleure
Namespace:FANTOM
Definition:"a structure created during embryogenesis when the lateral mesoderm splits into two layers - the outer (or somatic) layer becomes applied to the inner surface of the ectoderm, and with it forms the somatopleure.[WP]." [Wikipedia:Somatopleure]
Xrefs:
links:

EHDAA2:0001847
EHDAA:381
EMAPA:16180
[ 200px-Gray16.png 200px-Gray16.png]
ncithesaurus:Somatopleure

VHOG:0000557
Comments:todo - check relationship to LPM

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0005423(developing anatomical structure)
part_of:UBERON:0000922(embryo),UBERON:0003081(lateral plate mesoderm)



Children

develops from:UBERON:0005876 (undifferentiated genital tubercle),UBERON:0005971 (amniotic fold)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004874 (somatopleure), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
9.37e-99FFCP PHASE1:Hg19::chr12:53068923..53068932,-#_d6f2aa2424d8b5b314d70794700be2bdp@chr12:53068923..53068932, -
9.37e-99FFCP PHASE2:Hg19::chr12:53068889..53068898,-#_d6f2aa2424d8b5b314d70794700be2bdp@chr12:53068889..53068898, -
9.37e-99FFCP PHASE2:Hg19::chr12:53068923..53068932,-#_d6f2aa2424d8b5b314d70794700be2bdp@chr12:53068923..53068932, -
9.37e-99FFCP PHASE1:Hg19::chr12:53068889..53068898,-#_d6f2aa2424d8b5b314d70794700be2bdp@chr12:53068889..53068898, -
2.55e-98FFCP PHASE1:Hg19::chr17:38976407..38976413,-#_a184d5d555081c98dc92ed57be71307bp20@KRT10
2.55e-98FFCP PHASE1:Hg19::chr17:38975820..38975830,-#_a184d5d555081c98dc92ed57be71307bp10@KRT10
2.55e-98FFCP PHASE2:Hg19::chr9:79379348..79379360,+#_a184d5d555081c98dc92ed57be71307bp1@PCA3
2.55e-98FFCP PHASE2:Hg19::chr16:15811123..15811133,+#_a184d5d555081c98dc92ed57be71307bp@chr16:15811123..15811133, +
2.55e-98FFCP PHASE2:Hg19::chr15:45803320..45803343,+#_a184d5d555081c98dc92ed57be71307bp1@HMGN2P46
2.55e-98FFCP PHASE2:Hg19::chr17:38976407..38976413,-#_a184d5d555081c98dc92ed57be71307bp20@KRT10
2.55e-98FFCP PHASE2:Hg19::chr17:38975820..38975830,-#_a184d5d555081c98dc92ed57be71307bp10@KRT10
2.55e-98FFCP PHASE1:Hg19::chr5:59672718..59672753,-#_a184d5d555081c98dc92ed57be71307bp@chr5:59672718..59672753, -
2.55e-98FFCP PHASE1:Hg19::chr8:72252453..72252458,-#_a184d5d555081c98dc92ed57be71307bp@chr8:72252453..72252458, -
2.55e-98FFCP PHASE2:Hg19::chr6:110964453..110964459,-#_a184d5d555081c98dc92ed57be71307bp16@CDK19
2.55e-98FFCP PHASE2:Hg19::chr5:59672718..59672753,-#_a184d5d555081c98dc92ed57be71307bp@chr5:59672718..59672753, -
2.55e-98FFCP PHASE1:Hg19::chr15:45803320..45803343,+#_a184d5d555081c98dc92ed57be71307bp1@HMGN2P46
2.55e-98FFCP PHASE1:Hg19::chr6:110964453..110964459,-#_a184d5d555081c98dc92ed57be71307bp16@CDK19
2.55e-98FFCP PHASE2:Hg19::chr8:72252453..72252458,-#_a184d5d555081c98dc92ed57be71307bp@chr8:72252453..72252458, -
2.55e-98FFCP PHASE1:Hg19::chr16:15811123..15811133,+#_a184d5d555081c98dc92ed57be71307bp@chr16:15811123..15811133, +
2.55e-98FFCP PHASE1:Hg19::chr9:79379348..79379360,+#_a184d5d555081c98dc92ed57be71307bp1@PCA3
1.23e-66FFCP PHASE2:Hg19::chr12:53068552..53068579,-#_908986a18bcc13f8b19e30e13cf9abc5p@chr12:53068552..53068579, -
1.23e-66FFCP PHASE1:Hg19::chr14:74454889..74454892,-#_908986a18bcc13f8b19e30e13cf9abc5p10@ENTPD5
1.23e-66FFCP PHASE1:Hg19::chr12:53068552..53068579,-#_908986a18bcc13f8b19e30e13cf9abc5p@chr12:53068552..53068579, -
1.23e-66FFCP PHASE2:Hg19::chr14:74454889..74454892,-#_908986a18bcc13f8b19e30e13cf9abc5p10@ENTPD5
2.39e-66FFCP PHASE2:Hg19::chr1:209545365..209545377,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p1@ENST00000447257
2.39e-66FFCP PHASE1:Hg19::chr1:61416169..61416181,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr1:61416169..61416181, -
2.39e-66FFCP PHASE2:Hg19::chr4:186434325..186434339,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr4:186434325..186434339, -
2.39e-66FFCP PHASE1:Hg19::chr17:38976909..38976919,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:38976909..38976919, -
2.39e-66FFCP PHASE2:Hg19::chr1:61416169..61416181,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr1:61416169..61416181, -
2.39e-66FFCP PHASE1:Hg19::chr2:179399981..179399988,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr2:179399981..179399988, -
2.39e-66FFCP PHASE2:Hg19::chr19:51517928..51517936,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p2@AK026045
2.39e-66FFCP PHASE2:Hg19::chr17:38975796..38975805,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p13@KRT10
2.39e-66FFCP PHASE1:Hg19::chr2:179393635..179393640,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p167@TTN
2.39e-66FFCP PHASE2:Hg19::chr2:179393635..179393640,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p167@TTN
2.39e-66FFCP PHASE1:Hg19::chr17:38975850..38975854,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p19@KRT10
2.39e-66FFCP PHASE1:Hg19::chr19:51517928..51517936,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p2@AK026045
2.39e-66FFCP PHASE2:Hg19::chr2:179399981..179399988,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr2:179399981..179399988, -
2.39e-66FFCP PHASE1:Hg19::chr1:209545365..209545377,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p1@ENST00000447257
2.39e-66FFCP PHASE2:Hg19::chr17:38976909..38976919,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:38976909..38976919, -
2.39e-66FFCP PHASE2:Hg19::chr17:33640639..33640650,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:33640639..33640650, +
2.39e-66FFCP PHASE1:Hg19::chr17:38978526..38978535,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:38978526..38978535, +
2.39e-66FFCP PHASE1:Hg19::chr4:186434325..186434339,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr4:186434325..186434339, -
2.39e-66FFCP PHASE1:Hg19::chr6:152585338..152585342,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr6:152585338..152585342, -
2.39e-66FFCP PHASE2:Hg19::chr17:38975850..38975854,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p19@KRT10
2.39e-66FFCP PHASE2:Hg19::chr19:38664309..38664322,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr19:38664309..38664322, +
2.39e-66FFCP PHASE1:Hg19::chr17:33640639..33640650,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:33640639..33640650, +
2.39e-66FFCP PHASE2:Hg19::chr17:38978526..38978535,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr17:38978526..38978535, +
2.39e-66FFCP PHASE1:Hg19::chr19:38664309..38664322,+#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr19:38664309..38664322, +
2.39e-66FFCP PHASE2:Hg19::chr6:152585338..152585342,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p@chr6:152585338..152585342, -
2.39e-66FFCP PHASE1:Hg19::chr17:38975796..38975805,-#_3cfbe1c4c3cec0cf7ab576c7ede39363p13@KRT10
4.66e-66FFCP PHASE2:Hg19::chr16:34571309..34571314,-#_36943c388a272381c66ca54920de4d50p@chr16:34571309..34571314, -
4.66e-66FFCP PHASE1:Hg19::chr10:94301107..94301111,-#_36943c388a272381c66ca54920de4d50p18@IDE
4.66e-66FFCP PHASE1:Hg19::chr5:66771311..66771320,-#_36943c388a272381c66ca54920de4d50p2@ENST00000508512
4.66e-66FFCP PHASE2:Hg19::chr2:152520302..152520308,-#_36943c388a272381c66ca54920de4d50p@chr2:152520302..152520308, -
4.66e-66FFCP PHASE1:Hg19::chr2:152520302..152520308,-#_36943c388a272381c66ca54920de4d50p@chr2:152520302..152520308, -
4.66e-66FFCP PHASE2:Hg19::chr2:75869014..75869047,+#_36943c388a272381c66ca54920de4d50p@chr2:75869014..75869047, +
4.66e-66FFCP PHASE2:Hg19::chr2:179542558..179542568,-#_36943c388a272381c66ca54920de4d50p@chr2:179542558..179542568, -
4.66e-66FFCP PHASE2:Hg19::chr2:152520333..152520340,-#_36943c388a272381c66ca54920de4d50p@chr2:152520333..152520340, -
4.66e-66FFCP PHASE2:Hg19::chr5:66771311..66771320,-#_36943c388a272381c66ca54920de4d50p2@ENST00000508512
4.66e-66FFCP PHASE1:Hg19::chr2:179542558..179542568,-#_36943c388a272381c66ca54920de4d50p@chr2:179542558..179542568, -
4.66e-66FFCP PHASE1:Hg19::chr2:152520333..152520340,-#_36943c388a272381c66ca54920de4d50p@chr2:152520333..152520340, -
4.66e-66FFCP PHASE1:Hg19::chr2:152548420..152548425,-#_36943c388a272381c66ca54920de4d50p@chr2:152548420..152548425, -
4.66e-66FFCP PHASE2:Hg19::chr3:52875783..52875812,-#_36943c388a272381c66ca54920de4d50p7@TMEM110
4.66e-66FFCP PHASE2:Hg19::chr10:94301107..94301111,-#_36943c388a272381c66ca54920de4d50p18@IDE
4.66e-66FFCP PHASE2:Hg19::chr2:152548420..152548425,-#_36943c388a272381c66ca54920de4d50p@chr2:152548420..152548425, -
4.66e-66FFCP PHASE1:Hg19::chr3:52875783..52875812,-#_36943c388a272381c66ca54920de4d50p7@TMEM110
4.66e-66FFCP PHASE2:Hg19::chr13:103555720..103555725,+#_36943c388a272381c66ca54920de4d50p@chr13:103555720..103555725, +
4.66e-66FFCP PHASE1:Hg19::chr2:75869014..75869047,+#_36943c388a272381c66ca54920de4d50p@chr2:75869014..75869047, +
4.66e-66FFCP PHASE1:Hg19::chr13:103555720..103555725,+#_36943c388a272381c66ca54920de4d50p@chr13:103555720..103555725, +
4.66e-66FFCP PHASE1:Hg19::chr16:34571309..34571314,-#_36943c388a272381c66ca54920de4d50p@chr16:34571309..34571314, -
1.46e-50FFCP PHASE1:Hg19::chr2:178753478..178753487,-#_6a7a31795eddb90cab7720e7ab3d2ca1p10@PDE11A
1.46e-50FFCP PHASE2:Hg19::chr2:178753478..178753487,-#_6a7a31795eddb90cab7720e7ab3d2ca1p10@PDE11A
1.46e-50FFCP PHASE2:Hg19::chr17:4448859..4448864,-#_6a7a31795eddb90cab7720e7ab3d2ca1p@chr17:4448859..4448864, -
1.46e-50FFCP PHASE1:Hg19::chr17:4448859..4448864,-#_6a7a31795eddb90cab7720e7ab3d2ca1p@chr17:4448859..4448864, -
2.42e-50FFCP PHASE2:Hg19::chr2:170783857..170783860,+#_9f7593684fe03c90da39c17e12e9530ap@chr2:170783857..170783860, +
2.42e-50FFCP PHASE1:Hg19::chr10:15646574..15646578,-#_9f7593684fe03c90da39c17e12e9530ap11@ITGA8
2.42e-50FFCP PHASE1:Hg19::chr2:152554090..152554096,-#_9f7593684fe03c90da39c17e12e9530ap@chr2:152554090..152554096, -
2.42e-50FFCP PHASE2:Hg19::chr10:71351909..71351911,+#_9f7593684fe03c90da39c17e12e9530ap@chr10:71351909..71351911, +
2.42e-50FFCP PHASE1:Hg19::chr16:56598984..56598990,+#_9f7593684fe03c90da39c17e12e9530ap1@MT4
2.42e-50FFCP PHASE1:Hg19::chr17:10421962..10421969,-#_9f7593684fe03c90da39c17e12e9530ap2@MYH1
2.42e-50FFCP PHASE2:Hg19::chr20:33451327..33451358,-#_9f7593684fe03c90da39c17e12e9530ap4@GGT7
2.42e-50FFCP PHASE2:Hg19::chr2:152554090..152554096,-#_9f7593684fe03c90da39c17e12e9530ap@chr2:152554090..152554096, -
2.42e-50FFCP PHASE1:Hg19::chr10:71351909..71351911,+#_9f7593684fe03c90da39c17e12e9530ap@chr10:71351909..71351911, +
2.42e-50FFCP PHASE1:Hg19::chr2:170783857..170783860,+#_9f7593684fe03c90da39c17e12e9530ap@chr2:170783857..170783860, +
2.42e-50FFCP PHASE2:Hg19::chr10:15646574..15646578,-#_9f7593684fe03c90da39c17e12e9530ap11@ITGA8
2.42e-50FFCP PHASE2:Hg19::chr17:10421962..10421969,-#_9f7593684fe03c90da39c17e12e9530ap2@MYH1
2.42e-50FFCP PHASE1:Hg19::chr20:33451327..33451358,-#_9f7593684fe03c90da39c17e12e9530ap4@GGT7
2.42e-50FFCP PHASE2:Hg19::chr16:56598984..56598990,+#_9f7593684fe03c90da39c17e12e9530ap1@MT4
3.99e-50FFCP PHASE2:Hg19::chr2:179399074..179399079,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr2:179399074..179399079, -
3.99e-50FFCP PHASE1:Hg19::chr2:179399074..179399079,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr2:179399074..179399079, -
3.99e-50FFCP PHASE2:Hg19::chr5:66771414..66771419,-#_4fffb60cbbf5aa2aab13d1f5359ca785p2@ENST00000515184
3.99e-50FFCP PHASE1:Hg19::chr12:10856739..10856746,-#_4fffb60cbbf5aa2aab13d1f5359ca785p36@CSDA
3.99e-50FFCP PHASE2:Hg19::chr16:15865517..15865522,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr16:15865517..15865522, -
3.99e-50FFCP PHASE2:Hg19::chr6:2744431..2744440,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr6:2744431..2744440, -
3.99e-50FFCP PHASE2:Hg19::chr17:38976882..38976895,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr17:38976882..38976895, -
3.99e-50FFCP PHASE1:Hg19::chr1:152483278..152483280,+#_4fffb60cbbf5aa2aab13d1f5359ca785p1@LCE5A
3.99e-50FFCP PHASE2:Hg19::chr12:10856739..10856746,-#_4fffb60cbbf5aa2aab13d1f5359ca785p36@CSDA
3.99e-50FFCP PHASE1:Hg19::chr5:66771335..66771342,-#_4fffb60cbbf5aa2aab13d1f5359ca785p3@ENST00000508512
3.99e-50FFCP PHASE2:Hg19::chr1:152483278..152483280,+#_4fffb60cbbf5aa2aab13d1f5359ca785p1@LCE5A
3.99e-50FFCP PHASE1:Hg19::chr2:179454661..179454668,-#_4fffb60cbbf5aa2aab13d1f5359ca785p@chr2:179454661..179454668, -

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