Personal tools

UBERON:0004875

From FANTOM5_SSTAR

Jump to: navigation, search

Name:nephrogenic cord
Namespace:FANTOM
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
4.54e-44FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_2c808356ccd804cd36d69a04f78b05bep@chr18:44261480..44261486, +
4.54e-44FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_2c808356ccd804cd36d69a04f78b05bep3@Rnase13
4.54e-44FFCP PHASE2:Mm9::chr18:44319583..44319592,-#_2c808356ccd804cd36d69a04f78b05bep@chr18:44319583..44319592, -
4.54e-44FFCP PHASE2:Mm9::chr13:21378766..21378781,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378766..21378781, +
4.54e-44FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:101959282..101959299, -
4.54e-44FFCP PHASE2:Mm9::chr16:92995710..92995753,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:92995710..92995753, +
4.54e-44FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21383212..21383225, -
4.54e-44FFCP PHASE2:Mm9::chr5:112721323..112721328,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:112721323..112721328, +
4.54e-44FFCP PHASE2:Mm9::chr8:113585714..113585722,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:113585714..113585722, -
4.54e-44FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:39707572..39707583, +
4.54e-44FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:20419453..20419476, +
4.54e-44FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_2c808356ccd804cd36d69a04f78b05bep2@ENSMUST00000152401
4.54e-44FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155722142..155722175, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379261..21379264,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379261..21379264, -
4.54e-44FFCP PHASE2:Mm9::chr11:105797824..105797838,-#_2c808356ccd804cd36d69a04f78b05bep13@Cyb561
4.54e-44FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_2c808356ccd804cd36d69a04f78b05bep2@Wfdc11
4.54e-44FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_2c808356ccd804cd36d69a04f78b05bep11@Arhgef40
4.54e-44FFCP PHASE2:Mm9::chrX:75798097..75798101,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798097..75798101, -
4.54e-44FFCP PHASE2:Mm9::chrX:130496286..130496293,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496286..130496293, -
4.54e-44FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:192816674..192816714, +
4.54e-44FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_2c808356ccd804cd36d69a04f78b05bep@chr16:43230846..43230884, +
4.54e-44FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_2c808356ccd804cd36d69a04f78b05bep4@uc007mmw.1
4.54e-44FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:23683348..23683398, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141371..19141383, +
4.54e-44FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26611214..26611227, -
4.54e-44FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_2c808356ccd804cd36d69a04f78b05bep4@Gm17727
4.54e-44FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:83487114..83487124, -
4.54e-44FFCP PHASE2:Mm9::chr2:25349414..25349424,-#_2c808356ccd804cd36d69a04f78b05bep5@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr2:152302768..152302774,+#_2c808356ccd804cd36d69a04f78b05bep4@Defb20
4.54e-44FFCP PHASE1:Mm9::chr12:104945515..104945524,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:104945515..104945524, -
4.54e-44FFCP PHASE1:Mm9::chr11:53937918..53937922,+#_2c808356ccd804cd36d69a04f78b05bep7@P4ha2
4.54e-44FFCP PHASE2:Mm9::chr1:192816674..192816714,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:192816674..192816714, +
4.54e-44FFCP PHASE1:Mm9::chr8:25706074..25706082,-#_2c808356ccd804cd36d69a04f78b05bep3@Ido1
4.54e-44FFCP PHASE2:Mm9::chr9:35657557..35657582,-#_2c808356ccd804cd36d69a04f78b05bep2@Gm3428
4.54e-44FFCP PHASE2:Mm9::chr9:26731771..26731780,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26731771..26731780, -
4.54e-44FFCP PHASE2:Mm9::chr14:66589365..66589371,+#_2c808356ccd804cd36d69a04f78b05bep19@Clu
4.54e-44FFCP PHASE1:Mm9::chr2:164434346..164434353,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:164434346..164434353, -
4.54e-44FFCP PHASE1:Mm9::chr1:90155707..90155720,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155707..90155720, +
4.54e-44FFCP PHASE1:Mm9::chr4:106730107..106730125,-#_2c808356ccd804cd36d69a04f78b05bep@chr4:106730107..106730125, -
4.54e-44FFCP PHASE1:Mm9::chr2:160573065..160573077,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:160573065..160573077, +
4.54e-44FFCP PHASE2:Mm9::chr7:105313229..105313234,-#_2c808356ccd804cd36d69a04f78b05bep17@Capn5
4.54e-44FFCP PHASE1:Mm9::chrX:75798097..75798101,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798097..75798101, -
4.54e-44FFCP PHASE2:Mm9::chr1:155698166..155698174,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155698166..155698174, -
4.54e-44FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:172632171..172632178, -
4.54e-44FFCP PHASE1:Mm9::chrX:130496286..130496293,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496286..130496293, -
4.54e-44FFCP PHASE2:Mm9::chr15:75347689..75347703,+#_2c808356ccd804cd36d69a04f78b05bep@chr15:75347689..75347703, +
4.54e-44FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_2c808356ccd804cd36d69a04f78b05bep3@Gm6040, p3@LOC100503992
4.54e-44FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26704579..26704582, -
4.54e-44FFCP PHASE2:Mm9::chr7:151927980..151927988,+#_2c808356ccd804cd36d69a04f78b05bep@chr7:151927980..151927988, +
4.54e-44FFCP PHASE1:Mm9::chr1:87936213..87936218,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87936213..87936218, +
4.54e-44FFCP PHASE1:Mm9::chr14:63611201..63611210,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:63611201..63611210, +
4.54e-44FFCP PHASE2:Mm9::chr1:90155923..90155932,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155923..90155932, +
4.54e-44FFCP PHASE2:Mm9::chr13:21378968..21378988,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21378968..21378988, -
4.54e-44FFCP PHASE2:Mm9::chr4:33600466..33600491,-#_2c808356ccd804cd36d69a04f78b05bep@chr4:33600466..33600491, -
4.54e-44FFCP PHASE1:Mm9::chr9:26611214..26611227,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26611214..26611227, -
4.54e-44FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_2c808356ccd804cd36d69a04f78b05bep21@Pgap2
4.54e-44FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_2c808356ccd804cd36d69a04f78b05bep@chr12:16664708..16664723, +
4.54e-44FFCP PHASE2:Mm9::chr2:164434346..164434353,-#_2c808356ccd804cd36d69a04f78b05bep@chr2:164434346..164434353, -
4.54e-44FFCP PHASE1:Mm9::chr8:96014490..96014496,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:96014490..96014496, +
4.54e-44FFCP PHASE2:Mm9::chr12:110131610..110131621,-#_2c808356ccd804cd36d69a04f78b05bep11@Wars
4.54e-44FFCP PHASE1:Mm9::chr2:75866210..75866235,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:75866210..75866235, +
4.54e-44FFCP PHASE1:Mm9::chr1:165219453..165219469,-#_2c808356ccd804cd36d69a04f78b05bep11@Prrx1