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UBERON:0004875

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Name:nephrogenic cord
Namespace:FANTOM
Definition:"a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord]
Xrefs:
links:

FMA:72168
ncithesaurus:Nephrogenic_Cord

SCTID:361405003
Synonyms: "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord]
Comments:part_of or develops_from urogenital ridge?

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0004876(urogenital ridge)
part_of:UBERON:0000922(embryo)



Children

part of:UBERON:0005754 (rostral part of nephrogenic cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42p4@Spink12
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42p4@Defb42
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76p@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5p4@Cyb561
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5p2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5p@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5p@chr11:76361451..76361499, +
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap2@Eddm3b
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483ap@chr14:63627556..63627564, -
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3cap@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66ep@chr14:68644730..68644737, +
4.54e-44FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_2c808356ccd804cd36d69a04f78b05bep4@9230110F15Rik
4.54e-44FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155697874..155697885, -
4.54e-44FFCP PHASE1:Mm9::chr15:54678983..54678995,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:54678983..54678995, -
4.54e-44FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:20817297..20817313, +
4.54e-44FFCP PHASE1:Mm9::chr8:22061721..22061728,-#_2c808356ccd804cd36d69a04f78b05bep2@Gm6040, p2@LOC100503992
4.54e-44FFCP PHASE1:Mm9::chr2:25678985..25679033,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:25678985..25679033, +
4.54e-44FFCP PHASE1:Mm9::chr1:87922962..87922982,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87922962..87922982, +
4.54e-44FFCP PHASE2:Mm9::chr11:96140694..96140720,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:96140694..96140720, +
4.54e-44FFCP PHASE2:Mm9::chr2:25349402..25349409,-#_2c808356ccd804cd36d69a04f78b05bep3@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:52712744..52712754, +
4.54e-44FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_2c808356ccd804cd36d69a04f78b05bep@chr12:114385720..114385732, -
4.54e-44FFCP PHASE2:Mm9::chr14:66521865..66521876,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:66521865..66521876, +
4.54e-44FFCP PHASE1:Mm9::chrX:103276578..103276585,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:103276578..103276585, +
4.54e-44FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379118..21379120, -
4.54e-44FFCP PHASE1:Mm9::chr7:151928014..151928021,+#_2c808356ccd804cd36d69a04f78b05bep@chr7:151928014..151928021, +
4.54e-44FFCP PHASE1:Mm9::chr1:36016859..36016897,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:36016859..36016897, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141471..19141518,-#_2c808356ccd804cd36d69a04f78b05bep@chr8:19141471..19141518, -
4.54e-44FFCP PHASE2:Mm9::chr13:21380610..21380620,-#_2c808356ccd804cd36d69a04f78b05bep@chr13:21380610..21380620, -
4.54e-44FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379437..31379448, +
4.54e-44FFCP PHASE2:Mm9::chr15:54678915..54678922,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:54678915..54678922, -
4.54e-44FFCP PHASE1:Mm9::chr14:52542831..52542836,-#_2c808356ccd804cd36d69a04f78b05bep4@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr17:24865194..24865204,+#_2c808356ccd804cd36d69a04f78b05bep@chr17:24865194..24865204, +
4.54e-44FFCP PHASE1:Mm9::chr13:21385729..21385768,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21385729..21385768, +
4.54e-44FFCP PHASE2:Mm9::chr5:110773731..110773753,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:110773731..110773753, +
4.54e-44FFCP PHASE1:Mm9::chrX:50280126..50280140,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:50280126..50280140, +
4.54e-44FFCP PHASE2:Mm9::chr5:100634942..100634968,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:100634942..100634968, +
4.54e-44FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_2c808356ccd804cd36d69a04f78b05bep@chr16:22504758..22504766, -
4.54e-44FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_2c808356ccd804cd36d69a04f78b05bep@chr11:101958844..101958851, -
4.54e-44FFCP PHASE2:Mm9::chr6:54359310..54359337,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:54359310..54359337, -
4.54e-44FFCP PHASE1:Mm9::chr6:18338054..18338077,-#_2c808356ccd804cd36d69a04f78b05bep@chr6:18338054..18338077, -
4.54e-44FFCP PHASE1:Mm9::chrX:130496372..130496393,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:130496372..130496393, -
4.54e-44FFCP PHASE1:Mm9::chr14:51680551..51680555,-#_2c808356ccd804cd36d69a04f78b05bep@chr14:51680551..51680555, -
4.54e-44FFCP PHASE1:Mm9::chr13:21379107..21379136,+#_2c808356ccd804cd36d69a04f78b05bep@chr13:21379107..21379136, +
4.54e-44FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_2c808356ccd804cd36d69a04f78b05bep@chr10:56515486..56515496, +
4.54e-44FFCP PHASE2:Mm9::chr15:83143938..83143953,-#_2c808356ccd804cd36d69a04f78b05bep@chr15:83143938..83143953, -
4.54e-44FFCP PHASE1:Mm9::chr2:152302813..152302821,+#_2c808356ccd804cd36d69a04f78b05bep3@Defb20
4.54e-44FFCP PHASE1:Mm9::chr8:25706249..25706254,+#_2c808356ccd804cd36d69a04f78b05bep@chr8:25706249..25706254, +
4.54e-44FFCP PHASE2:Mm9::chr4:134913640..134913649,+#_2c808356ccd804cd36d69a04f78b05bep@chr4:134913640..134913649, +
4.54e-44FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:90155923..90155932, +
4.54e-44FFCP PHASE2:Mm9::chr2:160573065..160573077,+#_2c808356ccd804cd36d69a04f78b05bep@chr2:160573065..160573077, +
4.54e-44FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_2c808356ccd804cd36d69a04f78b05bep2@Rnase10
4.54e-44FFCP PHASE1:Mm9::chr9:70761885..70761895,+#_2c808356ccd804cd36d69a04f78b05bep@chr9:70761885..70761895, +
4.54e-44FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89597834..89597840, +
4.54e-44FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_2c808356ccd804cd36d69a04f78b05bep@chr9:26704579..26704582, -
4.54e-44FFCP PHASE1:Mm9::chr14:103837894..103837900,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:103837894..103837900, +
4.54e-44FFCP PHASE2:Mm9::chr5:31379486..31379501,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:31379486..31379501, +
4.54e-44FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_2c808356ccd804cd36d69a04f78b05bep@chrX:75798157..75798162, -
4.54e-44FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_2c808356ccd804cd36d69a04f78b05bep3@Rnase13
4.54e-44FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_2c808356ccd804cd36d69a04f78b05bep3@Gm3428
4.54e-44FFCP PHASE2:Mm9::chr1:87922778..87922788,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:87922778..87922788, +
4.54e-44FFCP PHASE2:Mm9::chr1:155722142..155722175,-#_2c808356ccd804cd36d69a04f78b05bep@chr1:155722142..155722175, -
4.54e-44FFCP PHASE2:Mm9::chr7:25565920..25565950,-#_2c808356ccd804cd36d69a04f78b05bep@chr7:25565920..25565950, -
4.54e-44FFCP PHASE1:Mm9::chr2:148676919..148676930,-#_2c808356ccd804cd36d69a04f78b05bep3@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr15:75304900..75304907,+#_2c808356ccd804cd36d69a04f78b05bep@chr15:75304900..75304907, +
4.54e-44FFCP PHASE2:Mm9::chr11:63779573..63779582,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:63779573..63779582, +
4.54e-44FFCP PHASE2:Mm9::chrX:20419453..20419476,+#_2c808356ccd804cd36d69a04f78b05bep@chrX:20419453..20419476, +
4.54e-44FFCP PHASE1:Mm9::chr5:35930667..35930691,+#_2c808356ccd804cd36d69a04f78b05bep@chr5:35930667..35930691, +
4.54e-44FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_2c808356ccd804cd36d69a04f78b05bep@chr1:89596972..89596981, +
4.54e-44FFCP PHASE2:Mm9::chr10:61976287..61976297,-#_2c808356ccd804cd36d69a04f78b05bep@chr10:61976287..61976297, -
4.54e-44FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_2c808356ccd804cd36d69a04f78b05bep@chr14:103746280..103746298, +
4.54e-44FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_2c808356ccd804cd36d69a04f78b05bep@chr11:101958876..101958883, +
4.54e-44FFCP PHASE2:Mm9::chr17:35252614..35252635,-#_2c808356ccd804cd36d69a04f78b05bep3@Ly6g5b