UBERON:0005178
From FANTOM5_SSTAR
Name: | thoracic cavity element | ||
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Namespace: | FANTOM | ||
Definition: | "An organ that is part of a thoracic cavity [Obol]." [OBOL:automatic] | ||
Xrefs: |
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Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0005181(thoracic segment organ) |
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part_of: | UBERON:0000915(thoracic segment of trunk) |
Children
is a: | UBERON:0001043 (esophagus),UBERON:0002048 (lung),UBERON:0015410 (heart plus pericardium) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
... further results Mouse (Mus musculus)
- 10015-101C6 (esophagus, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10029-101E2 (trachea, adult, pool1)
- 10058-101H4 (trachea, fetal, donor1)
- 10068-101I5 (lung, fetal, donor1)
- 10075-102A3 (lung, right lower lobe, adult, donor1)
- 10090-102B9
- 10099-102C9
- 10408-106B3 (lung adenocarcinoma cell line:PC-14)
- 10446-106F5
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005178 (thoracic cavity element), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.21e-66 | FFCP PHASE2:Mm9::chr11:85703335..85703350,+#_585326792238823ce23970dfe208dd45 | p4@Tbx4 |
1.21e-66 | FFCP PHASE1:Mm9::chr11:85703335..85703350,+#_585326792238823ce23970dfe208dd45 | p4@Tbx4 |
4.71e-66 | FFCP PHASE2:Mm9::chr9:20829911..20829920,+#_afa496f0dd9d95608deef399664bf279 | p@chr9:20829911..20829920, + |
4.71e-66 | FFCP PHASE1:Mm9::chr9:20829911..20829920,+#_afa496f0dd9d95608deef399664bf279 | p@chr9:20829911..20829920, + |
1.06e-62 | FFCP PHASE1:Mm9::chr11:85589157..85589190,-#_466f4911e9218d668842f5baa164d513 | p1@ENSMUST00000134305 |
1.06e-62 | FFCP PHASE2:Mm9::chr11:85589157..85589190,-#_466f4911e9218d668842f5baa164d513 | p1@ENSMUST00000134305 |
1.52e-61 | FFCP PHASE2:Mm9::chr11:85533239..85533252,-#_50e257dd87a7e5f406551b3a17d440c6 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
1.52e-61 | FFCP PHASE1:Mm9::chr11:85533239..85533252,-#_50e257dd87a7e5f406551b3a17d440c6 | p1@ENSMUST00000146806, p1@ENSMUST00000151652, p1@uc007krv.1, p1@uc007krw.1 |
1.91e-61 | FFCP PHASE2:Mm9::chr11:85699562..85699575,+#_f35bedb92005b3623e8e6cdf3c0ecd0f | p6@Tbx4 |
1.91e-61 | FFCP PHASE1:Mm9::chr11:85699562..85699575,+#_f35bedb92005b3623e8e6cdf3c0ecd0f | p6@Tbx4 |
5.56e-61 | FFCP PHASE1:Mm9::chr12:57598716..57598720,-#_89547e94dfeb4d477547901735fb012c | p@chr12:57598716..57598720, - |
5.56e-61 | FFCP PHASE2:Mm9::chr4:138812977..138812992,+#_89547e94dfeb4d477547901735fb012c | p@chr4:138812977..138812992, + |
5.56e-61 | FFCP PHASE2:Mm9::chr12:57636003..57636017,-#_89547e94dfeb4d477547901735fb012c | p@chr12:57636003..57636017, - |
5.56e-61 | FFCP PHASE2:Mm9::chr12:57598716..57598720,-#_89547e94dfeb4d477547901735fb012c | p@chr12:57598716..57598720, - |
5.56e-61 | FFCP PHASE1:Mm9::chr4:138812977..138812992,+#_89547e94dfeb4d477547901735fb012c | p@chr4:138812977..138812992, + |
5.56e-61 | FFCP PHASE1:Mm9::chr11:59457994..59457997,-#_89547e94dfeb4d477547901735fb012c | p@chr11:59457994..59457997, - |
5.56e-61 | FFCP PHASE2:Mm9::chr8:94878479..94878503,-#_89547e94dfeb4d477547901735fb012c | p@chr8:94878479..94878503, - |
5.56e-61 | FFCP PHASE2:Mm9::chr11:59457994..59457997,-#_89547e94dfeb4d477547901735fb012c | p@chr11:59457994..59457997, - |
5.56e-61 | FFCP PHASE1:Mm9::chr12:57636003..57636017,-#_89547e94dfeb4d477547901735fb012c | p@chr12:57636003..57636017, - |
5.56e-61 | FFCP PHASE1:Mm9::chr8:94878479..94878503,-#_89547e94dfeb4d477547901735fb012c | p@chr8:94878479..94878503, - |
1.35e-60 | FFCP PHASE2:Mm9::chr7:56809246..56809272,+#_c8d98e77ddcaab248167698e8c8c5c29 | p9@Nav2 |
1.35e-60 | FFCP PHASE1:Mm9::chr7:56809246..56809272,+#_c8d98e77ddcaab248167698e8c8c5c29 | p9@Nav2 |
2.87e-58 | FFCP PHASE1:Mm9::chr12:57633887..57633899,-#_b1e29c3dd0402f00bd5386f4fb3ca30d | p@chr12:57633887..57633899, - |
2.87e-58 | FFCP PHASE2:Mm9::chr12:57633887..57633899,-#_b1e29c3dd0402f00bd5386f4fb3ca30d | p@chr12:57633887..57633899, - |
1.23e-57 | FFCP PHASE2:Mm9::chr12:57637649..57637665,-#_78caf7f929dde3c04bd793d907190e33 | p8@Nkx2-1 |
1.23e-57 | FFCP PHASE1:Mm9::chr12:57637649..57637665,-#_78caf7f929dde3c04bd793d907190e33 | p8@Nkx2-1 |
1.37e-57 | FFCP PHASE1:Mm9::chr12:57630487..57630498,-#_afd95a109283311bb1f715d4789dac01 | p2@E030019B13Rik |
1.37e-57 | FFCP PHASE2:Mm9::chr12:57630487..57630498,-#_afd95a109283311bb1f715d4789dac01 | p2@E030019B13Rik |
1.53e-57 | FFCP PHASE2:Mm9::chr2:17653019..17653038,-#_73151150899808861728ec3027cb4d6b | p10@Nebl |
1.53e-57 | FFCP PHASE1:Mm9::chr2:17653019..17653038,-#_73151150899808861728ec3027cb4d6b | p10@Nebl |
1.7e-57 | FFCP PHASE2:Mm9::chr12:57637700..57637717,-#_78ebd3d0b3969ac102a894853525ab90 | p9@Nkx2-1 |
1.7e-57 | FFCP PHASE1:Mm9::chr12:57637700..57637717,-#_78ebd3d0b3969ac102a894853525ab90 | p9@Nkx2-1 |
1.79e-56 | FFCP PHASE1:Mm9::chr12:57630364..57630373,-#_b14eb74140e3d47c6c65344ec43c8fff | p3@E030019B13Rik |
1.79e-56 | FFCP PHASE1:Mm9::chr19:18833097..18833135,+#_b14eb74140e3d47c6c65344ec43c8fff | p3@Trpm6 |
1.79e-56 | FFCP PHASE2:Mm9::chr12:57598537..57598547,-#_b14eb74140e3d47c6c65344ec43c8fff | p@chr12:57598537..57598547, - |
1.79e-56 | FFCP PHASE2:Mm9::chr19:18833097..18833135,+#_b14eb74140e3d47c6c65344ec43c8fff | p3@Trpm6 |
1.79e-56 | FFCP PHASE1:Mm9::chr12:57598537..57598547,-#_b14eb74140e3d47c6c65344ec43c8fff | p@chr12:57598537..57598547, - |
1.79e-56 | FFCP PHASE2:Mm9::chr12:57630364..57630373,-#_b14eb74140e3d47c6c65344ec43c8fff | p3@E030019B13Rik |
2.01e-56 | FFCP PHASE1:Mm9::chr12:57636278..57636289,+#_6b58f7085e2dc83ff883b617958eef67 | p@chr12:57636278..57636289, + |
2.01e-56 | FFCP PHASE1:Mm9::chr14:115241755..115241762,-#_6b58f7085e2dc83ff883b617958eef67 | p@chr14:115241755..115241762, - |
2.01e-56 | FFCP PHASE2:Mm9::chr12:57636278..57636289,+#_6b58f7085e2dc83ff883b617958eef67 | p@chr12:57636278..57636289, + |
2.01e-56 | FFCP PHASE2:Mm9::chr14:115241755..115241762,-#_6b58f7085e2dc83ff883b617958eef67 | p@chr14:115241755..115241762, - |
2.24e-56 | FFCP PHASE2:Mm9::chr4:138812999..138813015,+#_80bfff046b644d6e6543116b4e08af81 | p@chr4:138812999..138813015, + |
2.24e-56 | FFCP PHASE1:Mm9::chr4:138812999..138813015,+#_80bfff046b644d6e6543116b4e08af81 | p@chr4:138812999..138813015, + |
3.93e-56 | FFCP PHASE1:Mm9::chr1:40522810..40522820,+#_4840e15648580d88b7e93c60b76224a1 | p7@Il18r1 |
3.93e-56 | FFCP PHASE2:Mm9::chr1:40522810..40522820,+#_4840e15648580d88b7e93c60b76224a1 | p7@Il18r1 |
6.2e-56 | FFCP PHASE2:Mm9::chr6:72255924..72255936,+#_b17cee66112d2b8d10968e09f8ae8b2e | p4@Sftpb |
6.2e-56 | FFCP PHASE2:Mm9::chr14:70921265..70921285,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr14:70921265..70921285, - |
6.2e-56 | FFCP PHASE1:Mm9::chr2:164374820..164374835,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr2:164374820..164374835, - |
6.2e-56 | FFCP PHASE2:Mm9::chr6:72256828..72256859,+#_b17cee66112d2b8d10968e09f8ae8b2e | p3@Sftpb |
6.2e-56 | FFCP PHASE2:Mm9::chr2:164374820..164374835,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr2:164374820..164374835, - |
6.2e-56 | FFCP PHASE1:Mm9::chr14:70922576..70922589,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr14:70922576..70922589, - |
6.2e-56 | FFCP PHASE2:Mm9::chr1:184610062..184610074,+#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr1:184610062..184610074, + |
6.2e-56 | FFCP PHASE1:Mm9::chr2:66524237..66524246,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr2:66524237..66524246, - |
6.2e-56 | FFCP PHASE1:Mm9::chr14:70921265..70921285,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr14:70921265..70921285, - |
6.2e-56 | FFCP PHASE1:Mm9::chr6:72256828..72256859,+#_b17cee66112d2b8d10968e09f8ae8b2e | p3@Sftpb |
6.2e-56 | FFCP PHASE1:Mm9::chr1:184610062..184610074,+#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr1:184610062..184610074, + |
6.2e-56 | FFCP PHASE2:Mm9::chr14:70922576..70922589,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr14:70922576..70922589, - |
6.2e-56 | FFCP PHASE1:Mm9::chr6:72255924..72255936,+#_b17cee66112d2b8d10968e09f8ae8b2e | p4@Sftpb |
6.2e-56 | FFCP PHASE2:Mm9::chr2:66524237..66524246,-#_b17cee66112d2b8d10968e09f8ae8b2e | p@chr2:66524237..66524246, - |
9.42e-56 | FFCP PHASE1:Mm9::chr5:120282691..120282701,+#_f0a7173dc23f35a02d811e38d6c04dcc | p@chr5:120282691..120282701, + |
9.42e-56 | FFCP PHASE2:Mm9::chr5:120282691..120282701,+#_f0a7173dc23f35a02d811e38d6c04dcc | p@chr5:120282691..120282701, + |
1.34e-54 | FFCP PHASE1:Mm9::chr12:57636911..57636924,-#_075ed7c4fccbc067a3c69b720bc2e35f | p@chr12:57636911..57636924, - |
1.34e-54 | FFCP PHASE2:Mm9::chr12:57636911..57636924,-#_075ed7c4fccbc067a3c69b720bc2e35f | p@chr12:57636911..57636924, - |
3.97e-54 | FFCP PHASE1:Mm9::chr12:57630443..57630450,-#_4eb653545d74ae3d83d3ca2bc5f756ee | p4@E030019B13Rik |
3.97e-54 | FFCP PHASE2:Mm9::chr12:57630443..57630450,-#_4eb653545d74ae3d83d3ca2bc5f756ee | p4@E030019B13Rik |
1.46e-52 | FFCP PHASE2:Mm9::chr14:70922007..70922052,+#_ba42fb3e15fb1ccb5c55da0f7f551f81 | p@chr14:70922007..70922052, + |
1.46e-52 | FFCP PHASE1:Mm9::chr14:70922007..70922052,+#_ba42fb3e15fb1ccb5c55da0f7f551f81 | p@chr14:70922007..70922052, + |
1.46e-52 | FFCP PHASE1:Mm9::chr12:57623172..57623185,-#_ba42fb3e15fb1ccb5c55da0f7f551f81 | p@chr12:57623172..57623185, - |
1.46e-52 | FFCP PHASE2:Mm9::chr12:57623172..57623185,-#_ba42fb3e15fb1ccb5c55da0f7f551f81 | p@chr12:57623172..57623185, - |
1.62e-52 | FFCP PHASE1:Mm9::chr5:28785436..28785450,-#_5d60c8667e446904a4b51854415a8764 | p@chr5:28785436..28785450, - |
1.62e-52 | FFCP PHASE2:Mm9::chr5:28785436..28785450,-#_5d60c8667e446904a4b51854415a8764 | p@chr5:28785436..28785450, - |
1.8e-52 | FFCP PHASE1:Mm9::chr14:70922459..70922482,-#_5b2089dc69e7d0ac127ac28df1b9aaf7 | p@chr14:70922459..70922482, - |
1.8e-52 | FFCP PHASE2:Mm9::chr14:70922459..70922482,-#_5b2089dc69e7d0ac127ac28df1b9aaf7 | p@chr14:70922459..70922482, - |
5.65e-52 | FFCP PHASE2:Mm9::chr16:22439804..22439806,-#_cbbd677e58fe9fdb34c462fc5d35fd55 | p4@Etv5 |
5.65e-52 | FFCP PHASE1:Mm9::chr16:22439804..22439806,-#_cbbd677e58fe9fdb34c462fc5d35fd55 | p4@Etv5 |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72263977..72263993,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72263977..72263993, + |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72264418..72264441,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72264418..72264441, + |
1.97e-51 | FFCP PHASE2:Mm9::chr16:19706386..19706390,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p4@Lamp3 |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72264890..72264911,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72264890..72264911, + |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72263977..72263993,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72263977..72263993, + |
1.97e-51 | FFCP PHASE2:Mm9::chr12:57376690..57376716,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr12:57376690..57376716, - |
1.97e-51 | FFCP PHASE2:Mm9::chr14:70922486..70922510,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr14:70922486..70922510, - |
1.97e-51 | FFCP PHASE1:Mm9::chr12:57376690..57376716,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr12:57376690..57376716, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72259797..72259814,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72259797..72259814, + |
1.97e-51 | FFCP PHASE2:Mm9::chr14:70923240..70923251,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr14:70923240..70923251, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72264418..72264441,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72264418..72264441, + |
1.97e-51 | FFCP PHASE1:Mm9::chr6:72259797..72259814,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72259797..72259814, + |
1.97e-51 | FFCP PHASE1:Mm9::chr14:70923240..70923251,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr14:70923240..70923251, - |
1.97e-51 | FFCP PHASE1:Mm9::chr16:19706386..19706390,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p4@Lamp3 |
1.97e-51 | FFCP PHASE1:Mm9::chr14:70922486..70922510,-#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr14:70922486..70922510, - |
1.97e-51 | FFCP PHASE2:Mm9::chr6:72264890..72264911,+#_8dfce4c2a2baf3e7eba0ab4f09a7757b | p@chr6:72264890..72264911, + |
2.21e-51 | FFCP PHASE1:Mm9::chr6:72264609..72264653,-#_6f609332420f5955d079678d87936319 | p@chr6:72264609..72264653, - |
2.21e-51 | FFCP PHASE2:Mm9::chr6:72264609..72264653,-#_6f609332420f5955d079678d87936319 | p@chr6:72264609..72264653, - |
2.47e-51 | FFCP PHASE2:Mm9::chr6:129378567..129378573,-#_6d39546287541895299390c4dd0b6ee7 | p@chr6:129378567..129378573, - |
2.47e-51 | FFCP PHASE1:Mm9::chr6:129378567..129378573,-#_6d39546287541895299390c4dd0b6ee7 | p@chr6:129378567..129378573, - |
3.74e-51 | FFCP PHASE2:Mm9::chr3:122432836..122432847,+#_74ee307755eedf9b0c56e8a42da528a6 | p16@Pde5a |
3.74e-51 | FFCP PHASE1:Mm9::chr3:122432836..122432847,+#_74ee307755eedf9b0c56e8a42da528a6 | p16@Pde5a |
5.44e-51 | FFCP PHASE2:Mm9::chr12:57637595..57637608,-#_bcd6b22f19cd98dc3e3a738d106feb68 | p7@Nkx2-1 |
5.44e-51 | FFCP PHASE1:Mm9::chr12:57637595..57637608,-#_bcd6b22f19cd98dc3e3a738d106feb68 | p7@Nkx2-1 |