Personal tools

UBERON:0006553

From FANTOM5_SSTAR

Jump to: navigation, search

Name:renal duct
Namespace:FANTOM
Definition:"A tube in the kidney that collect and transport urine." [ZFIN:ZDB-PUB-071029-9]
Xrefs:
links:

TAO:0005289

ZFA:0005289
Comments:in ZFA this is defined as part of mesonephros

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0009201 (nephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006553 (renal duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_c996e4a6607e53096692777a1b938268p4@Spink12
3.28e-58FFCP PHASE2:Mm9::chr16:25752228..25752237,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:25752228..25752237, +
3.28e-58FFCP PHASE1:Mm9::chr1:87922778..87922788,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:87922778..87922788, +
3.28e-58FFCP PHASE1:Mm9::chr10:116399500..116399516,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:116399500..116399516, +
3.28e-58FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_9b3409e528ac533dfd8475c41e23287dp4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr7:56772735..56772741,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:56772735..56772741, +
3.28e-58FFCP PHASE2:Mm9::chr4:134893699..134893708,+#_9b3409e528ac533dfd8475c41e23287dp@chr4:134893699..134893708, +
3.28e-58FFCP PHASE1:Mm9::chr12:110131571..110131579,-#_9b3409e528ac533dfd8475c41e23287dp15@Wars
3.28e-58FFCP PHASE1:Mm9::chr9:35715997..35716008,+#_9b3409e528ac533dfd8475c41e23287dp1@9230113P08Rik
3.28e-58FFCP PHASE2:Mm9::chr13:21385325..21385329,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21385325..21385329, -
3.28e-58FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_9b3409e528ac533dfd8475c41e23287dp@chr16:43230846..43230884, +
3.28e-58FFCP PHASE1:Mm9::chr11:34107586..34107593,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:34107586..34107593, -
3.28e-58FFCP PHASE1:Mm9::chr10:56515486..56515496,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:56515486..56515496, +
3.28e-58FFCP PHASE1:Mm9::chr13:21378774..21378782,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378774..21378782, -
3.28e-58FFCP PHASE2:Mm9::chr1:89597725..89597743,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:89597725..89597743, +
3.28e-58FFCP PHASE2:Mm9::chr5:110773580..110773589,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:110773580..110773589, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901482..116901494,-#_9b3409e528ac533dfd8475c41e23287dp2@ENSMUST00000152401
3.28e-58FFCP PHASE2:Mm9::chr12:16664708..16664723,+#_9b3409e528ac533dfd8475c41e23287dp@chr12:16664708..16664723, +
3.28e-58FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:160573108..160573123, +
3.28e-58FFCP PHASE1:Mm9::chr11:96140694..96140720,+#_9b3409e528ac533dfd8475c41e23287dp@chr11:96140694..96140720, +
3.28e-58FFCP PHASE1:Mm9::chr13:21379322..21379338,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379322..21379338, -
3.28e-58FFCP PHASE1:Mm9::chr8:22061771..22061777,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm6040, p3@LOC100503992
3.28e-58FFCP PHASE2:Mm9::chr15:72756032..72756041,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:72756032..72756041, -
3.28e-58FFCP PHASE1:Mm9::chrX:156776465..156776473,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:156776465..156776473, -
3.28e-58FFCP PHASE1:Mm9::chr9:35651650..35651673,-#_9b3409e528ac533dfd8475c41e23287dp4@9230110F15Rik
3.28e-58FFCP PHASE1:Mm9::chr6:54359310..54359337,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:54359310..54359337, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379372..21379404, +
3.28e-58FFCP PHASE1:Mm9::chr2:164434157..164434162,-#_9b3409e528ac533dfd8475c41e23287dp@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr9:35657485..35657490,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm3428
3.28e-58FFCP PHASE1:Mm9::chr11:116901540..116901549,-#_9b3409e528ac533dfd8475c41e23287dp4@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr2:25349488..25349492,-#_9b3409e528ac533dfd8475c41e23287dp6@Lcn12
3.28e-58FFCP PHASE1:Mm9::chr1:155738967..155738974,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:155738967..155738974, +
3.28e-58FFCP PHASE2:Mm9::chr7:109379339..109379349,+#_9b3409e528ac533dfd8475c41e23287dp15@Pgap2
3.28e-58FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:160347529..160347538, +
3.28e-58FFCP PHASE1:Mm9::chr8:126604677..126604701,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:126604677..126604701, -
3.28e-58FFCP PHASE1:Mm9::chr3:103650817..103650825,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:103650817..103650825, +
3.28e-58FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:148625223..148625234, +
3.28e-58FFCP PHASE1:Mm9::chr17:14306714..14306740,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:14306714..14306740, +
3.28e-58FFCP PHASE2:Mm9::chr2:148676919..148676930,-#_9b3409e528ac533dfd8475c41e23287dp3@9230104L09Rik
3.28e-58FFCP PHASE1:Mm9::chr15:72756032..72756041,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:72756032..72756041, -
3.28e-58FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:34107586..34107593, -
3.28e-58FFCP PHASE1:Mm9::chr5:88272459..88272484,-#_9b3409e528ac533dfd8475c41e23287dp@chr5:88272459..88272484, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378296..21378303,+#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378296..21378303, +
3.28e-58FFCP PHASE1:Mm9::chr8:19141482..19141496,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141482..19141496, +
3.28e-58FFCP PHASE2:Mm9::chr13:46041606..46041640,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:46041606..46041640, -
3.28e-58FFCP PHASE1:Mm9::chr3:65253465..65253475,+#_9b3409e528ac533dfd8475c41e23287dp@chr3:65253465..65253475, +
3.28e-58FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_9b3409e528ac533dfd8475c41e23287dp@chr19:24582739..24582748, -
3.28e-58FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379159..21379162, -
3.28e-58FFCP PHASE2:Mm9::chr5:77645280..77645295,-#_9b3409e528ac533dfd8475c41e23287dp@chr5:77645280..77645295, -
3.28e-58FFCP PHASE1:Mm9::chr8:91107095..91107103,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:91107095..91107103, +
3.28e-58FFCP PHASE2:Mm9::chr9:26704579..26704582,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr12:16664775..16664784,+#_9b3409e528ac533dfd8475c41e23287dp@chr12:16664775..16664784, +
3.28e-58FFCP PHASE1:Mm9::chrX:50280199..50280211,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280199..50280211, +
3.28e-58FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_9b3409e528ac533dfd8475c41e23287dp9@Tecta
3.28e-58FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_9b3409e528ac533dfd8475c41e23287dp@chr14:67453354..67453365, -
3.28e-58FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:63611303..63611312, +
3.28e-58FFCP PHASE1:Mm9::chr11:59845404..59845416,-#_9b3409e528ac533dfd8475c41e23287dp@chr11:59845404..59845416, -
3.28e-58FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:19141471..19141518, -
3.28e-58FFCP PHASE1:Mm9::chr13:21379125..21379144,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21379125..21379144, -
3.28e-58FFCP PHASE2:Mm9::chr6:49817766..49817772,-#_9b3409e528ac533dfd8475c41e23287dp@chr6:49817766..49817772, -
3.28e-58FFCP PHASE2:Mm9::chr13:21378927..21378932,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378927..21378932, -
3.28e-58FFCP PHASE1:Mm9::chr5:110773731..110773753,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:110773731..110773753, +
3.28e-58FFCP PHASE1:Mm9::chr2:158083973..158083982,+#_9b3409e528ac533dfd8475c41e23287dp3@Bpi
3.28e-58FFCP PHASE1:Mm9::chr14:63630486..63630493,+#_9b3409e528ac533dfd8475c41e23287dp5@Defb43
3.28e-58FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_9b3409e528ac533dfd8475c41e23287dp@chr10:127470322..127470326, +
3.28e-58FFCP PHASE1:Mm9::chr12:110132148..110132154,+#_9b3409e528ac533dfd8475c41e23287dp3@Wdr25
3.28e-58FFCP PHASE1:Mm9::chr9:42151966..42151976,-#_9b3409e528ac533dfd8475c41e23287dp9@Tecta
3.28e-58FFCP PHASE2:Mm9::chr15:54678983..54678995,-#_9b3409e528ac533dfd8475c41e23287dp@chr15:54678983..54678995, -
3.28e-58FFCP PHASE2:Mm9::chr4:138824620..138824627,+#_9b3409e528ac533dfd8475c41e23287dp@chr4:138824620..138824627, +
3.28e-58FFCP PHASE2:Mm9::chr14:63611201..63611210,+#_9b3409e528ac533dfd8475c41e23287dp@chr14:63611201..63611210, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379550..31379559,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31379550..31379559, +
3.28e-58FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_9b3409e528ac533dfd8475c41e23287dp11@P4ha2
3.28e-58FFCP PHASE1:Mm9::chr10:61976287..61976297,-#_9b3409e528ac533dfd8475c41e23287dp@chr10:61976287..61976297, -
3.28e-58FFCP PHASE1:Mm9::chr5:35930706..35930717,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:35930706..35930717, +
3.28e-58FFCP PHASE2:Mm9::chr2:164499572..164499580,-#_9b3409e528ac533dfd8475c41e23287dp2@Wfdc11
3.28e-58FFCP PHASE1:Mm9::chr13:21378871..21378901,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21378871..21378901, -
3.28e-58FFCP PHASE2:Mm9::chr7:75293847..75293851,+#_9b3409e528ac533dfd8475c41e23287dp@chr7:75293847..75293851, +
3.28e-58FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_9b3409e528ac533dfd8475c41e23287dp1@ENSMUST00000139012, p1@uc008uqo.1
3.28e-58FFCP PHASE1:Mm9::chr2:152290340..152290344,-#_9b3409e528ac533dfd8475c41e23287dp2@Defb23
3.28e-58FFCP PHASE1:Mm9::chr9:26704579..26704582,-#_9b3409e528ac533dfd8475c41e23287dp@chr9:26704579..26704582, -
3.28e-58FFCP PHASE1:Mm9::chr6:118298429..118298448,+#_9b3409e528ac533dfd8475c41e23287dp@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr1:43367743..43367754,-#_9b3409e528ac533dfd8475c41e23287dp@chr1:43367743..43367754, -
3.28e-58FFCP PHASE1:Mm9::chr13:21380670..21380678,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21380670..21380678, -
3.28e-58FFCP PHASE1:Mm9::chr8:23045782..23045791,+#_9b3409e528ac533dfd8475c41e23287dp@chr8:23045782..23045791, +
3.28e-58FFCP PHASE2:Mm9::chr11:53938008..53938022,+#_9b3409e528ac533dfd8475c41e23287dp11@P4ha2
3.28e-58FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_9b3409e528ac533dfd8475c41e23287dp@chr4:106731469..106731481, -
3.28e-58FFCP PHASE2:Mm9::chr14:51677155..51677162,-#_9b3409e528ac533dfd8475c41e23287dp5@Rnase12
3.28e-58FFCP PHASE1:Mm9::chr17:73221016..73221031,+#_9b3409e528ac533dfd8475c41e23287dp@chr17:73221016..73221031, +
3.28e-58FFCP PHASE1:Mm9::chr13:46041606..46041640,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:46041606..46041640, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_9b3409e528ac533dfd8475c41e23287dp@chrX:50280181..50280192, +
3.28e-58FFCP PHASE1:Mm9::chr9:35657485..35657490,-#_9b3409e528ac533dfd8475c41e23287dp3@Gm3428
3.28e-58FFCP PHASE2:Mm9::chr13:21381141..21381155,-#_9b3409e528ac533dfd8475c41e23287dp@chr13:21381141..21381155, -
3.28e-58FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_9b3409e528ac533dfd8475c41e23287dp@chr2:167688595..167688624, +
3.28e-58FFCP PHASE2:Mm9::chr5:31377177..31377184,+#_9b3409e528ac533dfd8475c41e23287dp@chr5:31377177..31377184, +
3.28e-58FFCP PHASE2:Mm9::chr1:39707572..39707583,+#_9b3409e528ac533dfd8475c41e23287dp@chr1:39707572..39707583, +
3.28e-58FFCP PHASE1:Mm9::chr8:113585714..113585722,-#_9b3409e528ac533dfd8475c41e23287dp@chr8:113585714..113585722, -
3.28e-58FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_9b3409e528ac533dfd8475c41e23287dp2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chrX:75798157..75798162,-#_9b3409e528ac533dfd8475c41e23287dp@chrX:75798157..75798162, -
3.28e-58FFCP PHASE1:Mm9::chr3:107731917..107731926,-#_9b3409e528ac533dfd8475c41e23287dp@chr3:107731917..107731926, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0006553&oldid=3277853"