Personal tools

UBERON:0007297

From FANTOM5_SSTAR

Jump to: navigation, search

Name:presumptive pronephric mesoderm
Namespace:FANTOM
Xrefs:
links:

EFO:0003619
TAO:0001070

ZFA:0001070
Synonyms: "nephron primordium" EXACT [ZFA:0001070]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0006598(presumptive structure)



Children

develops from:UBERON:0005721 (pronephric mesoderm)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007297 (presumptive pronephric mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
2.83e-65FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_1e232337bd4a4e39905dc3d306de13f7p@chr14:63585028..63585037, -
2.83e-65FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_1e232337bd4a4e39905dc3d306de13f7p4@Defb42
2.83e-65FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_1e232337bd4a4e39905dc3d306de13f7p@chr10:127470655..127470664, +
2.83e-65FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
2.83e-65FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_1e232337bd4a4e39905dc3d306de13f7p4@Spink12
3.99e-50FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
3.99e-50FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_d6dd81179c58782f35b55349a763402dp@chr2:152388713..152388729, +
5.6e-50FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
5.6e-50FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_13dbfe779366cc7ace596aff6a2c17a7p@chr2:120409486..120409492, +
1.6e-49FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
1.6e-49FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_bbabd0bf32af8f193f9186e017419eddp@chr11:76361451..76361499, +
1.6e-49FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_bbabd0bf32af8f193f9186e017419eddp2@D730048I06Rik, p2@Gm17727
1.6e-49FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585048..63585062, -
1.6e-49FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_bbabd0bf32af8f193f9186e017419eddp4@Cyb561
1.6e-49FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_bbabd0bf32af8f193f9186e017419eddp@chr14:63585020..63585025, -
2.33e-49FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_6211d53f99fdb57bae98268cd6f2517bp@chr14:63627556..63627564, -
2.33e-49FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26611246..26611253, -
2.33e-49FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
2.33e-49FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_6211d53f99fdb57bae98268cd6f2517bp@chr9:26732045..26732085, +
2.33e-49FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_6211d53f99fdb57bae98268cd6f2517bp2@Eddm3b
3.4e-49FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
3.4e-49FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_602347886880dd3c326b3ec48bc0a67ep@chr2:69981027..69981032, +
9.75e-45FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
9.75e-45FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_05712ab152acb2a54fb81635157a562fp@chr1:172416185..172416189, -
9.75e-45FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_05712ab152acb2a54fb81635157a562fp@chr14:68644730..68644737, +
9.75e-45FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_05712ab152acb2a54fb81635157a562fp10@PAX2
4.54e-44FFCP PHASE1:Mm9::chrX:12571771..12571780,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:12571771..12571780, -
4.54e-44FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:160573108..160573123, +
4.54e-44FFCP PHASE2:Mm9::chr8:23045782..23045791,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:23045782..23045791, +
4.54e-44FFCP PHASE2:Mm9::chr11:34107586..34107593,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:34107586..34107593, -
4.54e-44FFCP PHASE2:Mm9::chr13:21379159..21379162,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379159..21379162, -
4.54e-44FFCP PHASE2:Mm9::chr5:31379845..31379855,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379845..31379855, +
4.54e-44FFCP PHASE1:Mm9::chr16:92995710..92995753,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:92995710..92995753, +
4.54e-44FFCP PHASE1:Mm9::chr15:75304916..75304925,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:75304916..75304925, +
4.54e-44FFCP PHASE1:Mm9::chr11:116901482..116901494,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@ENSMUST00000152401
4.54e-44FFCP PHASE2:Mm9::chr9:42151966..42151976,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p9@Tecta
4.54e-44FFCP PHASE2:Mm9::chr2:148676859..148676866,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p5@9230104L09Rik
4.54e-44FFCP PHASE1:Mm9::chr1:89597660..89597668,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:89597660..89597668, +
4.54e-44FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:83143938..83143953, -
4.54e-44FFCP PHASE1:Mm9::chr14:63611303..63611312,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr14:63611303..63611312, +
4.54e-44FFCP PHASE1:Mm9::chr2:158083961..158083968,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p4@Bpi
4.54e-44FFCP PHASE2:Mm9::chr1:36016859..36016897,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:36016859..36016897, +
4.54e-44FFCP PHASE2:Mm9::chr11:101958855..101958871,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:101958855..101958871, -
4.54e-44FFCP PHASE1:Mm9::chr9:100350777..100350782,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:100350777..100350782, +
4.54e-44FFCP PHASE1:Mm9::chr19:24582739..24582748,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr19:24582739..24582748, -
4.54e-44FFCP PHASE1:Mm9::chr14:51627616..51627623,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Rnase10
4.54e-44FFCP PHASE1:Mm9::chr10:127470322..127470326,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr10:127470322..127470326, +
4.54e-44FFCP PHASE2:Mm9::chr8:22061721..22061728,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Gm6040, p2@LOC100503992
4.54e-44FFCP PHASE2:Mm9::chr1:90156002..90156013,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:90156002..90156013, +
4.54e-44FFCP PHASE2:Mm9::chr7:148445639..148445665,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:148445639..148445665, +
4.54e-44FFCP PHASE1:Mm9::chr2:25349488..25349492,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p6@Lcn12
4.54e-44FFCP PHASE1:Mm9::chr15:54678915..54678922,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr15:54678915..54678922, -
4.54e-44FFCP PHASE2:Mm9::chr11:53955299..53955306,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:53955299..53955306, +
4.54e-44FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:34813361..34813403, -
4.54e-44FFCP PHASE2:Mm9::chr4:106731469..106731481,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr4:106731469..106731481, -
4.54e-44FFCP PHASE1:Mm9::chr5:31379878..31379883,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr5:31379878..31379883, +
4.54e-44FFCP PHASE1:Mm9::chr13:21378927..21378932,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378927..21378932, -
4.54e-44FFCP PHASE2:Mm9::chr13:21381777..21381789,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21381777..21381789, -
4.54e-44FFCP PHASE2:Mm9::chr7:65995799..65995810,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr7:65995799..65995810, -
4.54e-44FFCP PHASE1:Mm9::chr9:26599476..26599505,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Glb1l2
4.54e-44FFCP PHASE2:Mm9::chr2:164480465..164480471,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Wfdc9
4.54e-44FFCP PHASE2:Mm9::chr3:103650730..103650741,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr3:103650730..103650741, +
4.54e-44FFCP PHASE1:Mm9::chr2:164499572..164499580,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p2@Wfdc11
4.54e-44FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:26727675..26727681, -
4.54e-44FFCP PHASE2:Mm9::chr13:24270118..24270122,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:24270118..24270122, -
4.54e-44FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21378871..21378901, -
4.54e-44FFCP PHASE2:Mm9::chr2:152388977..152388983,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:152388977..152388983, +
4.54e-44FFCP PHASE1:Mm9::chr1:192816674..192816714,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:192816674..192816714, +
4.54e-44FFCP PHASE1:Mm9::chr16:43230846..43230884,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr16:43230846..43230884, +
4.54e-44FFCP PHASE1:Mm9::chr8:19141371..19141383,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141371..19141383, +
4.54e-44FFCP PHASE2:Mm9::chr2:167688595..167688624,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:167688595..167688624, +
4.54e-44FFCP PHASE1:Mm9::chr18:44261480..44261486,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr18:44261480..44261486, +
4.54e-44FFCP PHASE1:Mm9::chr14:52542661..52542668,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p3@Rnase13
4.54e-44FFCP PHASE2:Mm9::chr13:21379372..21379404,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21379372..21379404, +
4.54e-44FFCP PHASE1:Mm9::chr13:21383212..21383225,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr13:21383212..21383225, -
4.54e-44FFCP PHASE1:Mm9::chr11:20817297..20817313,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:20817297..20817313, +
4.54e-44FFCP PHASE2:Mm9::chr8:126604677..126604701,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:126604677..126604701, -
4.54e-44FFCP PHASE1:Mm9::chrX:20419453..20419476,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:20419453..20419476, +
4.54e-44FFCP PHASE2:Mm9::chr4:123977104..123977120,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p1@ENSMUST00000139012, p1@uc008uqo.1
4.54e-44FFCP PHASE1:Mm9::chr1:155722142..155722175,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:155722142..155722175, -
4.54e-44FFCP PHASE2:Mm9::chrX:50280181..50280192,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chrX:50280181..50280192, +
4.54e-44FFCP PHASE2:Mm9::chr1:11079838..11079844,+#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr1:11079838..11079844, +
4.54e-44FFCP PHASE1:Mm9::chr12:114385720..114385732,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr12:114385720..114385732, -
4.54e-44FFCP PHASE2:Mm9::chr8:19141471..19141518,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:19141471..19141518, -
4.54e-44FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr2:172632171..172632178, -
4.54e-44FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr11:101958844..101958851, -
4.54e-44FFCP PHASE2:Mm9::chr8:113585667..113585673,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr8:113585667..113585673, -
4.54e-44FFCP PHASE2:Mm9::chr9:65941913..65941923,-#_6b2567d87d29aa604c7e3f1b9ed9ab35p@chr9:65941913..65941923, -