Personal tools

UBERON:0009618

From FANTOM5_SSTAR

Jump to: navigation, search

Name:trunk paraxial mesoderm
Namespace:FANTOM
Xrefs:
links:
EHDAA2:0002094
Synonyms: "trunk and cervical paraxial mesenchyme" EXACT [EHDAA2:0002094]
"trunk paraxial mesenchyme" RELATED []

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005256(trunk mesenchyme)
develops_from:UBERON:0000926(mesoderm)
part_of:UBERON:0003077(paraxial mesoderm),UBERON:0005256(trunk mesenchyme)



Children

develops from:UBERON:0007282 (presumptive segmental plate)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009618 (trunk paraxial mesoderm), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data