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UBERON:0010364

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Name:dermal skeleton
Namespace:FANTOM
Definition:"Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements." [VSAO:0000035]
Xrefs:
links:

VSAO:0000035

XAO:0004025
Synonyms: "dermal skeletal system" RELATED [VSAO:curator]
"dermoskeleton" RELATED [VSAO:curator]
"desmoskeleton" RELATED [VSAO:curator]
"exoskeleton" BROAD [VSAO:curator]
Comments:This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0010912(subdivision of skeleton)



Children

part of:UBERON:0003113 (dermatocranium),UBERON:0008907 (dermal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010364 (dermal skeleton), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37p14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37p14@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331fp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331fp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331fp12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331fp12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331fp11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331fp11@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331fp13@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331fp13@C17orf67
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821bp@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821bp@chr5:75912402..75912418, -
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821bp14@MAB21L2
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821bp14@MAB21L2
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8p@chr4:151505582..151505614, +
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8p@chr4:151505582..151505614, +
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3p17@RSRC1
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3p9@C17orf67
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3p17@RSRC1
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8fp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp1@AK123925
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp7@ALX1
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8fp@chr5:75913767..75913778, -
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bbp23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bbp23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bbp@chr2:33519090..33519092, +
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bbp@chr2:33519090..33519092, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353779..57353790, -
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200ep12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200ep12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200ep2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200ep2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200ep8@LHX8
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200ep8@LHX8
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr16:67687543..67687559, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110p@chr6:46190219..46190230, -
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4ap4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4ap4@CPZ
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4ap5@PENK
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4ap5@PENK
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4ap@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4ap@chr10:15760985..15760992, -
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510p9@SIX1
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8ep@chr6:134327986..134327991, -
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8ep@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0p@chr8:57353676..57353688, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0p@chr8:57353676..57353688, -
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bcp12@FBN2
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bcp4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bcp@chr5:19721484..19721507, -
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bcp12@FBN2
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bcp4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bcp@chr5:19721484..19721507, -
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353804..57353821, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57354360..57354367, +
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353982..57353991, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353982..57353991, -
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597p10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597p10@ITGA8
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597p7@SHOX2
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597p7@SHOX2
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14p@chr17:79071218..79071221, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bcp@chr1:21904551..21904569, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bcp@chr1:21904551..21904569, -
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60p18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60p18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60p@chr8:57359975..57359992, -
4.2e-29FFCP PHASE2:Hg19::chr4:151503350..151503358,+#_1b168629e9c702f3dc4dfcb7b08bb736p11@MAB21L2
4.2e-29FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_1b168629e9c702f3dc4dfcb7b08bb736p11@MAB21L2