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UBERON:0000463

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Name:organism substance
Namespace:FANTOM
Definition:"Material anatomical entity in a gaseous, liquid, semisolid or solid state; produced by anatomical structures or derived from inhaled and ingested substances that have been modified by anatomical structures as they pass through the body." [CARO:MAH]
Xrefs:
links:

AAO:0010839
AEO:0000004
BILA:0000004
CARO:0000004
EHDAA2:0003004
FBbt:00007019
FMA:9669
galen:BodySubstance
HAO:0000004
MA:0002450
ncithesaurus:Body_Fluid_or_Substance
SPD:0000008
TAO:0001487
TGMA:0001824
XAO:0004001

ZFA:0001487
Synonyms: "body fluid or substance" EXACT [MA:0002450]
"body substance" EXACT [FMA:9669]
"organism substance" EXACT []
"portion of body substance" EXACT [FMA:9669]
Alt_id: UBERON:CARO_0000004-FBbt_00007019
Subset: upper_level

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0000465(material anatomical entity)
part_of:UBERON:0000468(multi-cellular organism)



Children

is a:UBERON:0006312 (ocular refractive media),UBERON:0006314 (bodily fluid)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000463 (organism substance), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
2.41e-121FFCP PHASE1:Hg19::chr1:205236716..205236728,+#_1846f6d890cebe3451ed9a176f00532dp13@TMCC2
2.41e-121FFCP PHASE2:Hg19::chr1:205236716..205236728,+#_1846f6d890cebe3451ed9a176f00532dp13@TMCC2
2.31e-117FFCP PHASE2:Hg19::chr7:44973137..44973140,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr7:44973137..44973140, -
2.31e-117FFCP PHASE2:Hg19::chr9:38090057..38090092,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr9:38090057..38090092, +
2.31e-117FFCP PHASE1:Hg19::chr20:54933899..54933911,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep7@FAM210B
2.31e-117FFCP PHASE1:Hg19::chr2:127434629..127434640,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr2:127434629..127434640, +
2.31e-117FFCP PHASE1:Hg19::chr14:81627978..81627994,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:81627978..81627994, -
2.31e-117FFCP PHASE1:Hg19::chr16:29810067..29810071,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr16:29810067..29810071, +
2.31e-117FFCP PHASE1:Hg19::chr16:31539534..31539538,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep4@AHSP
2.31e-117FFCP PHASE1:Hg19::chr17:42336860..42336865,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr17:42336860..42336865, -
2.31e-117FFCP PHASE1:Hg19::chr2:192318775..192318777,-#_94cabe1dd8c3ff7cfc83050e0f45b17e-, p@chr2:192318775..192318777
2.31e-117FFCP PHASE1:Hg19::chr4:74847473..74847482,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr4:74847473..74847482, -
2.31e-117FFCP PHASE2:Hg19::chr12:111678218..111678221,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr12:111678218..111678221, +
2.31e-117FFCP PHASE2:Hg19::chr2:192318775..192318777,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr2:192318775..192318777, -
2.31e-117FFCP PHASE1:Hg19::chr7:44973137..44973140,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr7:44973137..44973140, -
2.31e-117FFCP PHASE2:Hg19::chr12:829787..829796,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr12:829787..829796, -
2.31e-117FFCP PHASE2:Hg19::chr20:54933899..54933911,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep7@FAM210B
2.31e-117FFCP PHASE2:Hg19::chr2:127434629..127434640,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr2:127434629..127434640, +
2.31e-117FFCP PHASE2:Hg19::chr11:118962235..118962238,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep5@HMBS
2.31e-117FFCP PHASE2:Hg19::chr11:125491251..125491253,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr11:125491251..125491253, -
2.31e-117FFCP PHASE2:Hg19::chr11:61044581..61044587,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr11:61044581..61044587, -
2.31e-117FFCP PHASE1:Hg19::chr11:118962235..118962238,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep5@HMBS
2.31e-117FFCP PHASE1:Hg19::chr11:125491251..125491253,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr11:125491251..125491253, -
2.31e-117FFCP PHASE1:Hg19::chr11:61044581..61044587,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr11:61044581..61044587, -
2.31e-117FFCP PHASE1:Hg19::chr12:111678218..111678221,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr12:111678218..111678221, +
2.31e-117FFCP PHASE1:Hg19::chr12:829787..829796,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr12:829787..829796, -
2.31e-117FFCP PHASE1:Hg19::chr14:65501285..65501318,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:65501285..65501318, +
2.31e-117FFCP PHASE1:Hg19::chr14:75444134..75444136,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:75444134..75444136, -
2.31e-117FFCP PHASE2:Hg19::chr14:65501285..65501318,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:65501285..65501318, +
2.31e-117FFCP PHASE2:Hg19::chr14:75444134..75444136,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:75444134..75444136, -
2.31e-117FFCP PHASE2:Hg19::chr14:81627978..81627994,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr14:81627978..81627994, -
2.31e-117FFCP PHASE1:Hg19::chr9:38090057..38090092,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr9:38090057..38090092, +
2.31e-117FFCP PHASE2:Hg19::chr16:29810067..29810071,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr16:29810067..29810071, +
2.31e-117FFCP PHASE2:Hg19::chr16:31539534..31539538,+#_94cabe1dd8c3ff7cfc83050e0f45b17ep4@AHSP
2.31e-117FFCP PHASE2:Hg19::chr4:74847473..74847482,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr4:74847473..74847482, -
2.31e-117FFCP PHASE2:Hg19::chr17:42336860..42336865,-#_94cabe1dd8c3ff7cfc83050e0f45b17ep@chr17:42336860..42336865, -
8.26e-109FFCP PHASE1:Hg19::chr6:148938884..148938891,+#_77e0d2ebf7522106b46d6669e875bbf2p@chr6:148938884..148938891, +
8.26e-109FFCP PHASE2:Hg19::chr2:192701558..192701565,-#_77e0d2ebf7522106b46d6669e875bbf2p@chr2:192701558..192701565, -
8.26e-109FFCP PHASE2:Hg19::chr6:148938884..148938891,+#_77e0d2ebf7522106b46d6669e875bbf2p@chr6:148938884..148938891, +
8.26e-109FFCP PHASE1:Hg19::chr2:192701558..192701565,-#_77e0d2ebf7522106b46d6669e875bbf2p@chr2:192701558..192701565, -
8.23e-106FFCP PHASE1:Hg19::chr2:23680232..23680238,-#_f3a243b10696115414dc4d9c05a5e275p@chr2:23680232..23680238, -
8.23e-106FFCP PHASE1:Hg19::chr3:142671745..142671768,-#_f3a243b10696115414dc4d9c05a5e275p@chr3:142671745..142671768, -
8.23e-106FFCP PHASE1:Hg19::chr5:95843224..95843228,-#_f3a243b10696115414dc4d9c05a5e275p@chr5:95843224..95843228, -
8.23e-106FFCP PHASE2:Hg19::chr5:95843224..95843228,-#_f3a243b10696115414dc4d9c05a5e275p@chr5:95843224..95843228, -
8.23e-106FFCP PHASE2:Hg19::chr6:156352553..156352562,-#_f3a243b10696115414dc4d9c05a5e275p@chr6:156352553..156352562, -
8.23e-106FFCP PHASE2:Hg19::chr17:42335778..42335781,-#_f3a243b10696115414dc4d9c05a5e275p4@SLC4A1
8.23e-106FFCP PHASE2:Hg19::chr17:42337173..42337177,-#_f3a243b10696115414dc4d9c05a5e275p@chr17:42337173..42337177, -
8.23e-106FFCP PHASE1:Hg19::chr1:154912672..154912683,+#_f3a243b10696115414dc4d9c05a5e275p@chr1:154912672..154912683, +
8.23e-106FFCP PHASE1:Hg19::chr1:161137023..161137027,+#_f3a243b10696115414dc4d9c05a5e275p@chr1:161137023..161137027, +
8.23e-106FFCP PHASE1:Hg19::chr2:127434578..127434589,+#_f3a243b10696115414dc4d9c05a5e275p@chr2:127434578..127434589, +
8.23e-106FFCP PHASE2:Hg19::chr7:30950369..30950387,+#_f3a243b10696115414dc4d9c05a5e275p@chr7:30950369..30950387, +
8.23e-106FFCP PHASE2:Hg19::chr1:154912672..154912683,+#_f3a243b10696115414dc4d9c05a5e275p@chr1:154912672..154912683, +
8.23e-106FFCP PHASE2:Hg19::chr1:161137023..161137027,+#_f3a243b10696115414dc4d9c05a5e275p@chr1:161137023..161137027, +
8.23e-106FFCP PHASE2:Hg19::chr8:21861540..21861544,+#_f3a243b10696115414dc4d9c05a5e275p@chr8:21861540..21861544, +
8.23e-106FFCP PHASE1:Hg19::chr6:156352553..156352562,-#_f3a243b10696115414dc4d9c05a5e275p@chr6:156352553..156352562, -
8.23e-106FFCP PHASE2:Hg19::chr12:30576643..30576644,-#_f3a243b10696115414dc4d9c05a5e275p@chr12:30576643..30576644, -
8.23e-106FFCP PHASE1:Hg19::chr7:30950369..30950387,+#_f3a243b10696115414dc4d9c05a5e275p@chr7:30950369..30950387, +
8.23e-106FFCP PHASE2:Hg19::chr2:23680232..23680238,-#_f3a243b10696115414dc4d9c05a5e275p@chr2:23680232..23680238, -
8.23e-106FFCP PHASE2:Hg19::chr12:938316..938322,+#_f3a243b10696115414dc4d9c05a5e275p@chr12:938316..938322, +
8.23e-106FFCP PHASE1:Hg19::chr17:42335778..42335781,-#_f3a243b10696115414dc4d9c05a5e275p4@SLC4A1
8.23e-106FFCP PHASE1:Hg19::chr17:42337173..42337177,-#_f3a243b10696115414dc4d9c05a5e275p@chr17:42337173..42337177, -
8.23e-106FFCP PHASE1:Hg19::chr8:21861540..21861544,+#_f3a243b10696115414dc4d9c05a5e275p@chr8:21861540..21861544, +
8.23e-106FFCP PHASE2:Hg19::chr3:142671745..142671768,-#_f3a243b10696115414dc4d9c05a5e275p@chr3:142671745..142671768, -
8.23e-106FFCP PHASE2:Hg19::chr2:127434578..127434589,+#_f3a243b10696115414dc4d9c05a5e275p@chr2:127434578..127434589, +
8.23e-106FFCP PHASE2:Hg19::chr10:46076393..46076404,-#_f3a243b10696115414dc4d9c05a5e275p@chr10:46076393..46076404, -
8.23e-106FFCP PHASE2:Hg19::chr10:8724326..8724327,-#_f3a243b10696115414dc4d9c05a5e275p@chr10:8724326..8724327, -
8.23e-106FFCP PHASE2:Hg19::chr11:5246715..5246726,+#_f3a243b10696115414dc4d9c05a5e275p8@CU675538
8.23e-106FFCP PHASE2:Hg19::chr11:5246742..5246755,+#_f3a243b10696115414dc4d9c05a5e275p7@CU675538
8.23e-106FFCP PHASE2:Hg19::chr11:76367785..76367794,-#_f3a243b10696115414dc4d9c05a5e275p5@ENST00000531511
8.23e-106FFCP PHASE2:Hg19::chr11:76367970..76367987,-#_f3a243b10696115414dc4d9c05a5e275p2@ENST00000531511
8.23e-106FFCP PHASE1:Hg19::chr10:46076393..46076404,-#_f3a243b10696115414dc4d9c05a5e275p@chr10:46076393..46076404, -
8.23e-106FFCP PHASE1:Hg19::chr10:8724326..8724327,-#_f3a243b10696115414dc4d9c05a5e275p@chr10:8724326..8724327, -
8.23e-106FFCP PHASE1:Hg19::chr11:5246715..5246726,+#_f3a243b10696115414dc4d9c05a5e275p8@CU675538
8.23e-106FFCP PHASE1:Hg19::chr11:5246742..5246755,+#_f3a243b10696115414dc4d9c05a5e275p7@CU675538
8.23e-106FFCP PHASE1:Hg19::chr11:76367785..76367794,-#_f3a243b10696115414dc4d9c05a5e275p5@ENST00000531511
8.23e-106FFCP PHASE1:Hg19::chr11:76367970..76367987,-#_f3a243b10696115414dc4d9c05a5e275p2@ENST00000531511
8.23e-106FFCP PHASE1:Hg19::chr12:30576643..30576644,-#_f3a243b10696115414dc4d9c05a5e275p@chr12:30576643..30576644, -
8.23e-106FFCP PHASE1:Hg19::chr12:938316..938322,+#_f3a243b10696115414dc4d9c05a5e275p@chr12:938316..938322, +
9.3e-106FFCP PHASE1:Hg19::chr11:235547..235556,-#_5e9aafc55115bc1f5a2d557f61ea9323p@chr11:235547..235556, -
9.3e-106FFCP PHASE1:Hg19::chr7:18520409..18520411,-#_5e9aafc55115bc1f5a2d557f61ea9323p@chr7:18520409..18520411, -
9.3e-106FFCP PHASE1:Hg19::chr3:24179318..24179327,+#_5e9aafc55115bc1f5a2d557f61ea9323p@chr3:24179318..24179327, +
9.3e-106FFCP PHASE1:Hg19::chr3:39430391..39430424,+#_5e9aafc55115bc1f5a2d557f61ea9323p@chr3:39430391..39430424, +
9.3e-106FFCP PHASE2:Hg19::chr19:17146840..17146843,-#_5e9aafc55115bc1f5a2d557f61ea9323p@chr19:17146840..17146843, -
9.3e-106FFCP PHASE2:Hg19::chr7:18520409..18520411,-#_5e9aafc55115bc1f5a2d557f61ea9323p@chr7:18520409..18520411, -
9.3e-106FFCP PHASE2:Hg19::chr11:235547..235556,-#_5e9aafc55115bc1f5a2d557f61ea9323-, p@chr11:235547..235556
9.3e-106FFCP PHASE1:Hg19::chr19:17146840..17146843,-#_5e9aafc55115bc1f5a2d557f61ea9323p@chr19:17146840..17146843, -
9.3e-106FFCP PHASE2:Hg19::chr3:24179318..24179327,+#_5e9aafc55115bc1f5a2d557f61ea9323p@chr3:24179318..24179327, +
9.3e-106FFCP PHASE2:Hg19::chr3:39430391..39430424,+#_5e9aafc55115bc1f5a2d557f61ea9323p@chr3:39430391..39430424, +
1.05e-105FFCP PHASE2:Hg19::chr13:59545633..59545635,-#_4659414bbc476134f11c2d6b73b1cb40p@chr13:59545633..59545635, -
1.05e-105FFCP PHASE2:Hg19::chr3:151067996..151068011,-#_4659414bbc476134f11c2d6b73b1cb40p@chr3:151067996..151068011, -
1.05e-105FFCP PHASE1:Hg19::chr13:59545633..59545635,-#_4659414bbc476134f11c2d6b73b1cb40p@chr13:59545633..59545635, -
1.05e-105FFCP PHASE1:Hg19::chr3:151067996..151068011,-#_4659414bbc476134f11c2d6b73b1cb40p@chr3:151067996..151068011, -
1.34e-105FFCP PHASE1:Hg19::chr4:99783676..99783681,-#_0cba99c98ed1b7ca84d19cbeb20a97bcp@chr4:99783676..99783681, -
1.34e-105FFCP PHASE2:Hg19::chr4:99783676..99783681,-#_0cba99c98ed1b7ca84d19cbeb20a97bcp@chr4:99783676..99783681, -
1.87e-104FFCP PHASE2:Hg19::chr4:171855577..171855579,-#_775a757402c8f8a8dd603bc89719b5e3p@chr4:171855577..171855579, -
1.87e-104FFCP PHASE2:Hg19::chr4:52905409..52905410,-#_775a757402c8f8a8dd603bc89719b5e3p@chr4:52905409..52905410, -
1.87e-104FFCP PHASE2:Hg19::chr17:31866023..31866027,-#_775a757402c8f8a8dd603bc89719b5e3p@chr17:31866023..31866027, -
1.87e-104FFCP PHASE1:Hg19::chr4:171855577..171855579,-#_775a757402c8f8a8dd603bc89719b5e3p@chr4:171855577..171855579, -
1.87e-104FFCP PHASE1:Hg19::chr4:52905409..52905410,-#_775a757402c8f8a8dd603bc89719b5e3p@chr4:52905409..52905410, -
1.87e-104FFCP PHASE1:Hg19::chr10:103347733..103347744,-#_775a757402c8f8a8dd603bc89719b5e3p6@POLL

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