Personal tools

FFCP PHASE1:Hg19::chr4:46126009..46126045,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:46126009..46126045,-
|short_description=p1@GABRG1
|description=CAGE_peak_1_at_GABRG1_5end
|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end
|EntrezGene=2565
|EntrezGene=2565
|HGNC=4086
|HGNC=4086
|UniProt=F5H2S0,Q8N1C3
|UniProt=F5H2S0,Q8N1C3
|association_with_transcript=36bp_to_ENST00000540030,NM_173536,uc003gxb.2_5end
|description=CAGE_peak_1_at_GABRG1_5end
|id=chr4:46126009..46126045,-
|ontology_enrichment_celltype=
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6975897841505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,55.6722682749127,73.5701047826982,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,43.6199735742848,66.7930306765329,9.98068990005971,0,0,0,0,0,0,0,0,0,89.4598799671978,88.7589788283002,42.7228861687833,98.8578583785148,29.8503095143083,58.7952864372646,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,42.4627137778265,0,55.0521447454547,0,0,0,0,0,17.7522201745684,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.193978032976839,0,6.77942222341597,0,0,57.8027567077173,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,43.8306810758146,42.7144782143018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.2088345643629,104.195605675355,0,0,0,0,0,44.0434285770679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,74.8548317333378,75.6370481968187,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,35.4427271986794,66.138235576864,67.4779116508034,99.1997908543823,84.860724425692,50.2980863825206,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.5344987359204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,45.9238959439686,34.0071783181404,62.257205032289,34.6646655566876,10.0828678488687,19.7789742047663,57.1623785536753,5.71077681036618,0,0,0,0,0,0,0,1.72983755203292,0,0,0,0,0,30.2568379090408,52.3322326071278,63.4528465258635,28.4736987770642,20.7850427426923,0,0,0,0,4.28561468702629,7.73452561103295,7.89055285507621,11.3831095675649,0,0,0,29.6348035778986,24.7305628596313,0,0,0,71.1733622319489,0,0,0,0,1.50100742770978,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.237840181555137,0.79062257427272,0,0,0.385870790539723,0,0,0,0,56.3405300619893,90.5991520997612,15.2156061930024,0,0,0.257831551894309,0,0.178553938605658,0,0,0,0,44.5786103601014,0,25.9727492529294,12.6541700198709,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0.378893491091197,0.267964130156178,64.6752162777848,67.5417462978176,0.213233981900981,0.476128862927481,0.129177819672012,0.0620747142958579,0,0.509177266225319,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.6975897841505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22724939116194,0,0.540911356951966,0,0,0,0.293016358543788,0,0,0,0,0,0,55.6722682749127,73.5701047826982,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,43.6199735742848,66.7930306765329,9.98068990005971,0,0,0,0,0,0,0,0,0,89.4598799671978,88.7589788283002,42.7228861687833,98.8578583785148,29.8503095143083,58.7952864372646,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,42.4627137778265,0,55.0521447454547,0,0,0,0,0,17.7522201745684,0.821425535170343,0,0,0,0,0,0,0,0,0,0,0,2.09672001890436,0,0,0,0,0.193978032976839,0,6.77942222341597,0,0,57.8027567077173,0,0,0.213452994739353,0.19980960958213,0,0,0,0,0,0,0,0,0,0,43.8306810758146,42.7144782143018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.2088345643629,104.195605675355,0,0,0,0,0,44.0434285770679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,74.8548317333378,75.6370481968187,0,0,0.106787412567695,0.628817220398664,0,0,0,0,0,0,0.2506898940227,0.612691153526923,0.327872630709804,0,35.4427271986794,66.138235576864,67.4779116508034,99.1997908543823,84.860724425692,50.2980863825206,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,65.5344987359204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.80057074828547,0,0,45.9238959439686,34.0071783181404,62.257205032289,34.6646655566876,10.0828678488687,19.7789742047663,57.1623785536753,5.71077681036618,0,0,0,0,0,0,0,1.72983755203292,0,0,0,0,0,30.2568379090408,52.3322326071278,63.4528465258635,28.4736987770642,20.7850427426923,0,0,0,0,4.28561468702629,7.73452561103295,7.89055285507621,11.3831095675649,0,0,0,29.6348035778986,24.7305628596313,0,0,0,71.1733622319489,0,0,0,0,1.50100742770978,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0.237840181555137,0.79062257427272,0,0,0.385870790539723,0,0,0,0,56.3405300619893,90.5991520997612,15.2156061930024,0,0,0.257831551894309,0,0.178553938605658,0,0,0,0,44.5786103601014,0,25.9727492529294,12.6541700198709,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0.18378979906969,0,0.378893491091197,0.267964130156178,64.6752162777848,67.5417462978176,0.213233981900981,0.476128862927481,0.129177819672012,0.0620747142958579,0,0.509177266225319,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0.665756774185513,0.201273793591026,0
|short_description=p1@GABRG1
}}
}}

Revision as of 00:52, 22 April 2012

Short description:p1@GABRG1
Species:Human (Homo sapiens)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_GABRG1_5end
Coexpression cluster:NA
Association with transcript: 36bp_to_ENST00000540030, NM_173536, uc003gxb.2_5end
EntrezGene:GABRG1
HGNC: 4086
UniProt: F5H2S0Q8N1C3
Genome view:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression



0
20
40
60
80
100
120




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data








Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Hg19::chr4:46126009..46126045,-&oldid=1372256"