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Revision as of 17:21, 15 June 2012

Name:epithelial cord
Xrefs:
links:
EHDAA2:0004052
Comments:TODO - add superclass of developing structure

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000483(epithelium)



Children

is a:UBERON:0005295 (sex cord)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005154 (epithelial cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_ae052c0694a478b1fc43b6e8b9e3c44fp26@BDNF
5.42e-195FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_ae052c0694a478b1fc43b6e8b9e3c44fp26@BDNF
9.37e-99FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_060b85b00ec0af059e01987de3564f6dp43@CDC42BPA
9.37e-99FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_060b85b00ec0af059e01987de3564f6dp9@RARRES1
9.37e-99FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_060b85b00ec0af059e01987de3564f6dp9@RARRES1
9.37e-99FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_060b85b00ec0af059e01987de3564f6dp43@CDC42BPA
2.55e-98FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_0b5c57fc9dee15a4220f10bf13004118p@chr13:53030077..53030083, -
2.55e-98FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_0b5c57fc9dee15a4220f10bf13004118p@chr7:18206831..18206833, +
2.55e-98FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_0b5c57fc9dee15a4220f10bf13004118p@chr19:54600897..54600899, +
2.55e-98FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_0b5c57fc9dee15a4220f10bf13004118p@chr3:193356854..193356864, +
2.55e-98FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_0b5c57fc9dee15a4220f10bf13004118p@chr3:170430340..170430344, +
2.55e-98FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_0b5c57fc9dee15a4220f10bf13004118p@chr8:69832864..69832865, +
2.55e-98FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_0b5c57fc9dee15a4220f10bf13004118p@chr2:9519086..9519101, +
2.55e-98FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_0b5c57fc9dee15a4220f10bf13004118p7@C7orf63
2.55e-98FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_0b5c57fc9dee15a4220f10bf13004118p@chr7:18206831..18206833, +
2.55e-98FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_0b5c57fc9dee15a4220f10bf13004118p@chr19:40320572..40320586, -
2.55e-98FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_0b5c57fc9dee15a4220f10bf13004118p@chr2:9519086..9519101, +
2.55e-98FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_0b5c57fc9dee15a4220f10bf13004118p@chr3:193356854..193356864, +
2.55e-98FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_0b5c57fc9dee15a4220f10bf13004118p@chr3:170430340..170430344, +
2.55e-98FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_0b5c57fc9dee15a4220f10bf13004118p@chr8:47529304..47529311, -
2.55e-98FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_0b5c57fc9dee15a4220f10bf13004118p7@C7orf63
2.55e-98FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_0b5c57fc9dee15a4220f10bf13004118p@chr8:69832864..69832865, +
2.55e-98FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_0b5c57fc9dee15a4220f10bf13004118p@chr8:47529304..47529311, -
2.55e-98FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_0b5c57fc9dee15a4220f10bf13004118p@chr13:53030077..53030083, -
2.55e-98FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_0b5c57fc9dee15a4220f10bf13004118p@chr19:54600897..54600899, +
2.55e-98FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_0b5c57fc9dee15a4220f10bf13004118p@chr19:40320572..40320586, -
1.23e-66FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_57aafff994097a4fb36d9dd5e4f66977p@chr2:19551668..19551679, -
1.23e-66FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_57aafff994097a4fb36d9dd5e4f66977p@chr2:19551668..19551679, -
2.39e-66FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_afbc885370c9b0d03ad5ecec30df3cb0p@chr3:112931461..112931474, -
2.39e-66FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_afbc885370c9b0d03ad5ecec30df3cb0p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_afbc885370c9b0d03ad5ecec30df3cb0p22@TMEM130
2.39e-66FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_afbc885370c9b0d03ad5ecec30df3cb0p@chr2:72803155..72803204, -
2.39e-66FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_afbc885370c9b0d03ad5ecec30df3cb0p21@EPS8
2.39e-66FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_afbc885370c9b0d03ad5ecec30df3cb0p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_afbc885370c9b0d03ad5ecec30df3cb0p@chr2:72803155..72803204, -
2.39e-66FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_afbc885370c9b0d03ad5ecec30df3cb0p21@EPS8
2.39e-66FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_afbc885370c9b0d03ad5ecec30df3cb0p22@TMEM130
2.39e-66FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_afbc885370c9b0d03ad5ecec30df3cb0p@chr3:112931461..112931474, -
4.66e-66FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_91f2ebe11339161005c83c9da0899fc8p@chr21:48080873..48080878, +
4.66e-66FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_91f2ebe11339161005c83c9da0899fc8p38@PTK2
4.66e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_91f2ebe11339161005c83c9da0899fc8p@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_91f2ebe11339161005c83c9da0899fc8p@chr3:99984127..99984138, +
4.66e-66FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_91f2ebe11339161005c83c9da0899fc8p4@GTPBP4
4.66e-66FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_91f2ebe11339161005c83c9da0899fc8p@chr3:170916991..170916995, -
4.66e-66FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_91f2ebe11339161005c83c9da0899fc8p4@GTPBP4
4.66e-66FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_91f2ebe11339161005c83c9da0899fc8p38@PTK2
4.66e-66FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_91f2ebe11339161005c83c9da0899fc8p@chr5:90830481..90830492, +
4.66e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_91f2ebe11339161005c83c9da0899fc8p@chr5:75912402..75912418, -
4.66e-66FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_91f2ebe11339161005c83c9da0899fc8p@chr3:99984127..99984138, +
4.66e-66FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_91f2ebe11339161005c83c9da0899fc8p@chr5:90830481..90830492, +
4.66e-66FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_91f2ebe11339161005c83c9da0899fc8p@chr3:170916991..170916995, -
4.66e-66FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_91f2ebe11339161005c83c9da0899fc8p@chr21:48080873..48080878, +
6.41e-58FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_77ebbe1ca9c8193043135eee8c4a871ep4@Spink12
6.41e-58FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_77ebbe1ca9c8193043135eee8c4a871ep4@Spink12
1.46e-50FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_64c47121c37be60aaeb349769fd2ed3bp8@TCF21
1.46e-50FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_64c47121c37be60aaeb349769fd2ed3bp@chr2:177009137..177009140, +
1.46e-50FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_64c47121c37be60aaeb349769fd2ed3bp@chr11:114173606..114173612, +
1.46e-50FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_64c47121c37be60aaeb349769fd2ed3bp@chr2:177009137..177009140, +
1.46e-50FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_64c47121c37be60aaeb349769fd2ed3bp8@TCF21
1.46e-50FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_64c47121c37be60aaeb349769fd2ed3bp@chr11:114173606..114173612, +
2.42e-50FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_0f23bf595e314226cb2922f61aa7f0a4p@chr15:39288691..39288698, +
2.42e-50FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_0f23bf595e314226cb2922f61aa7f0a4p@chr15:39288691..39288698, +
2.42e-50FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_0f23bf595e314226cb2922f61aa7f0a4p@chr3:46477553..46477563, -
2.42e-50FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_0f23bf595e314226cb2922f61aa7f0a4p@chr5:144875561..144875565, +
2.42e-50FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_0f23bf595e314226cb2922f61aa7f0a4p32@CREB3L2
2.42e-50FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_0f23bf595e314226cb2922f61aa7f0a4p31@ZNF331
2.42e-50FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_0f23bf595e314226cb2922f61aa7f0a4p@chr5:144875561..144875565, +
2.42e-50FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_0f23bf595e314226cb2922f61aa7f0a4p32@CREB3L2
2.42e-50FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_0f23bf595e314226cb2922f61aa7f0a4p11@USP25
2.42e-50FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_0f23bf595e314226cb2922f61aa7f0a4p6@C2orf63
2.42e-50FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_0f23bf595e314226cb2922f61aa7f0a4p@chr3:46477553..46477563, -
2.42e-50FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_0f23bf595e314226cb2922f61aa7f0a4p31@ZNF331
2.42e-50FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_0f23bf595e314226cb2922f61aa7f0a4p11@USP25
2.42e-50FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_0f23bf595e314226cb2922f61aa7f0a4p6@C2orf63
3.99e-50FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_ae74d7a33a6344101b1fc39e17b46645p@chr4:103969123..103969127, -
3.99e-50FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_ae74d7a33a6344101b1fc39e17b46645p@chr12:5198350..5198359, +
3.99e-50FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_ae74d7a33a6344101b1fc39e17b46645p@chr4:103969123..103969127, -
3.99e-50FFCP PHASE1:Hg19::chr11:829412..829430,+#_ae74d7a33a6344101b1fc39e17b46645p11@EFCAB4A
3.99e-50FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_ae74d7a33a6344101b1fc39e17b46645p@chr12:5198350..5198359, +
3.99e-50FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_ae74d7a33a6344101b1fc39e17b46645p10@ESR2
3.99e-50FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_ae74d7a33a6344101b1fc39e17b46645p10@ESR2
3.99e-50FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_ae74d7a33a6344101b1fc39e17b46645p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_ae74d7a33a6344101b1fc39e17b46645p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE2:Hg19::chr11:829412..829430,+#_ae74d7a33a6344101b1fc39e17b46645p11@EFCAB4A
6.58e-50FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_18127318bbd778eabe01f44b63c0ce78p51@CDK6
6.58e-50FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_18127318bbd778eabe01f44b63c0ce78p3@CACNA1H
6.58e-50FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_18127318bbd778eabe01f44b63c0ce78p1@LOC645638
6.58e-50FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_18127318bbd778eabe01f44b63c0ce78p3@CACNA1H
6.58e-50FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_18127318bbd778eabe01f44b63c0ce78p51@CDK6
6.58e-50FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_18127318bbd778eabe01f44b63c0ce78p13@SOS2
6.58e-50FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_18127318bbd778eabe01f44b63c0ce78p13@SOS2
6.58e-50FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_18127318bbd778eabe01f44b63c0ce78p1@LOC645638
4.52e-44FFCP PHASE1:Mm9::chr17:75581992..75582009,+#_9b639c60e0a83f2d2bd8950c8afa63f7p@chr17:75581992..75582009, +
4.52e-44FFCP PHASE2:Mm9::chr17:75581992..75582009,+#_9b639c60e0a83f2d2bd8950c8afa63f7p@chr17:75581992..75582009, +
6.62e-41FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_41f14464c17bdeb703f2e22e4dafb1f7p@chr3:194214959..194214968, -
6.62e-41FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_41f14464c17bdeb703f2e22e4dafb1f7p@chr3:194214959..194214968, -
9.91e-41FFCP PHASE2:Hg19::chr11:77282391..77282402,+#_50485c296b6ba17590e93b2a115d198dp@chr11:77282391..77282402, +
9.91e-41FFCP PHASE2:Hg19::chr11:94822746..94822757,+#_50485c296b6ba17590e93b2a115d198dp8@ENDOD1
9.91e-41FFCP PHASE2:Hg19::chr13:49549473..49549480,+#_50485c296b6ba17590e93b2a115d198dp@chr13:49549473..49549480, +
9.91e-41FFCP PHASE1:Hg19::chr22:44377278..44377303,+#_50485c296b6ba17590e93b2a115d198dp@chr22:44377278..44377303, +

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