UBERON:0000483
From FANTOM5_SSTAR
Name: | epithelium | |
---|---|---|
Namespace: | FANTOM | |
Definition: | "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]." [CARO:MAH, Wikipedia:Epithelium] | |
Xrefs: |
| |
Synonyms: |
"epithelial tissue" EXACT [] "portion of epithelium" EXACT [FMA:9639] | |
Alt_id: | UBERON:CARO_0000066-FBbt_00007005-FMA_9639-XAO_0003045-ZFA_0001486 | |
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000119(cell layer) |
---|---|
union_of: | UBERON:0000486(multilaminar epithelium),UBERON:0000490(unilaminar epithelium) |
Children
is a: | UBERON:0000486 (multilaminar epithelium),UBERON:0000488 (atypical epithelium),UBERON:0000490 (unilaminar epithelium),UBERON:0003350 (epithelium of mucosa),UBERON:0003914 (epithelial tube),UBERON:0003929 (gut epithelium),UBERON:0004807 (respiratory system epithelium),UBERON:0004808 (gastrointestinal system epithelium),UBERON:0004819 (kidney epithelium),UBERON:0005157 (epithelial fold),UBERON:0005891 (coelomic epithelium),UBERON:0005911 (endo-epithelium),UBERON:0006799 (glandular epithelium),UBERON:0006914 (squamous epithelium),UBERON:0007503 (epithelial vesicle),UBERON:0007625 (pigment epithelium of eye),UBERON:0010077 (cuboidal epithelium),UBERON:0010371 (ecto-epithelium),FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL),UBERON:0012274 (columnar epithelium),UBERON:0012275 (meso-epithelium),UBERON:0015807 (ear epithelium),FF:10263-104D2 (Follicle Associated Epithelium, pool3) |
---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10052-101G7 (aorta, adult, pool1)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 10216-103G9 (chicken embryo whole body, day01 (HH7 1-3 somites))
- 10217-103H1 (chicken embryo whole body, day01 (HH7 2-3 somites))
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
... further results Mouse (Mus musculus)
- 10052-101G7 (aorta, adult, pool1)
- 10065-101I2 (skin, fetal, donor1)
- 10074-102A2 (skin, adult, donor1)
- 10190-103E1 (artery, adult)
- 10191-103E2 (vein, adult)
- 10216-103G9 (chicken embryo whole body, day01 (HH7 1-3 somites))
- 10217-103H1 (chicken embryo whole body, day01 (HH7 2-3 somites))
- 10252-104B9 (Ileum epithelium, pool1)
- 10253-104C1 (Ileum epithelium, pool2)
- 10254-104C2
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000483 (epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.