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UBERON:0000483

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Name:epithelium
Namespace:FANTOM
Definition:"Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]." [CARO:MAH, Wikipedia:Epithelium]
Xrefs:
links:

AAO:0000144
AAO:0010055
AEO:0000066
BILA:0000066
BTO:0000416
CARO:0000066
EHDAA2:0003066
FBbt:00007005
FMA:9639
GAID:402
HAO:0000066
[ Tkanka_nablonkowa.png Tkanka_nablonkowa.png]
MESH:A.10.272
ncithesaurus:Epithelium
SCTID:31610004
TAO:0001486
VHOG:0000387
XAO:0003045

ZFA:0001486
Synonyms: "epithelial tissue" EXACT []
"portion of epithelium" EXACT [FMA:9639]
Alt_id: UBERON:CARO_0000066-FBbt_00007005-FMA_9639-XAO_0003045-ZFA_0001486
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000119(cell layer)
union_of:UBERON:0000486(multilaminar epithelium),UBERON:0000490(unilaminar epithelium)



Children

is a:UBERON:0000486 (multilaminar epithelium),UBERON:0000488 (atypical epithelium),UBERON:0000490 (unilaminar epithelium),UBERON:0003350 (epithelium of mucosa),UBERON:0003914 (epithelial tube),UBERON:0003929 (gut epithelium),UBERON:0004807 (respiratory system epithelium),UBERON:0004808 (gastrointestinal system epithelium),UBERON:0004819 (kidney epithelium),UBERON:0005157 (epithelial fold),UBERON:0005891 (coelomic epithelium),UBERON:0005911 (endo-epithelium),UBERON:0006799 (glandular epithelium),UBERON:0006914 (squamous epithelium),UBERON:0007503 (epithelial vesicle),UBERON:0007625 (pigment epithelium of eye),UBERON:0010077 (cuboidal epithelium),UBERON:0010371 (ecto-epithelium),FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL),UBERON:0012274 (columnar epithelium),UBERON:0012275 (meso-epithelium),UBERON:0015807 (ear epithelium),FF:10263-104D2 (Follicle Associated Epithelium, pool3)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000483 (epithelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.