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Revision as of 17:26, 15 June 2012

Name:otic cup

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005423(developing anatomical structure)
develops_from:UBERON:0003069(otic placode)



Children

develops from:UBERON:0003051 (ear vesicle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009123 (otic cup), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_b1910012f17566919440def95cc5be02p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_b1910012f17566919440def95cc5be02p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_b1910012f17566919440def95cc5be02p@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_b1910012f17566919440def95cc5be02p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_b1910012f17566919440def95cc5be02p@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_b1910012f17566919440def95cc5be02p2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_b1910012f17566919440def95cc5be02p@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_b1910012f17566919440def95cc5be02p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_b1910012f17566919440def95cc5be02p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_b1910012f17566919440def95cc5be02p@chr13:78257491..78257498, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_b1910012f17566919440def95cc5be02p@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_b1910012f17566919440def95cc5be02p2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_b1910012f17566919440def95cc5be02p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_b1910012f17566919440def95cc5be02p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_b1910012f17566919440def95cc5be02p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_b1910012f17566919440def95cc5be02p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_b1910012f17566919440def95cc5be02p1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_b1910012f17566919440def95cc5be02p2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_b1910012f17566919440def95cc5be02p@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_b1910012f17566919440def95cc5be02p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_b1910012f17566919440def95cc5be02p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_b1910012f17566919440def95cc5be02p@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_b1910012f17566919440def95cc5be02p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_b1910012f17566919440def95cc5be02p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_b1910012f17566919440def95cc5be02p@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_b1910012f17566919440def95cc5be02p@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_b1910012f17566919440def95cc5be02p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_b1910012f17566919440def95cc5be02p1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_b1910012f17566919440def95cc5be02p13@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_b1910012f17566919440def95cc5be02p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_b1910012f17566919440def95cc5be02p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_b1910012f17566919440def95cc5be02p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_b1910012f17566919440def95cc5be02p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_b1910012f17566919440def95cc5be02p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_b1910012f17566919440def95cc5be02p@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_b1910012f17566919440def95cc5be02p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02p1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_b1910012f17566919440def95cc5be02p4@BC030867
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_b1910012f17566919440def95cc5be02p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_b1910012f17566919440def95cc5be02p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_b1910012f17566919440def95cc5be02p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_b1910012f17566919440def95cc5be02p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_b1910012f17566919440def95cc5be02p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_b1910012f17566919440def95cc5be02p@chr15:12848147..12848162, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_b1910012f17566919440def95cc5be02p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_b1910012f17566919440def95cc5be02p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_b1910012f17566919440def95cc5be02p@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_b1910012f17566919440def95cc5be02p1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02p12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_b1910012f17566919440def95cc5be02p2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_b1910012f17566919440def95cc5be02p12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_b1910012f17566919440def95cc5be02p6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_b1910012f17566919440def95cc5be02p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr10:108316802..108316807,-#_b1910012f17566919440def95cc5be02p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_b1910012f17566919440def95cc5be02p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_b1910012f17566919440def95cc5be02p3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_b1910012f17566919440def95cc5be02p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_b1910012f17566919440def95cc5be02p2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_b1910012f17566919440def95cc5be02p@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_b1910012f17566919440def95cc5be02p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_b1910012f17566919440def95cc5be02p@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_b1910012f17566919440def95cc5be02p@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_b1910012f17566919440def95cc5be02p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_b1910012f17566919440def95cc5be02p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_b1910012f17566919440def95cc5be02p@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_b1910012f17566919440def95cc5be02p@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_b1910012f17566919440def95cc5be02p2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_b1910012f17566919440def95cc5be02p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_b1910012f17566919440def95cc5be02p@chr2:53464168..53464175, +
1.87e-86FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_b1910012f17566919440def95cc5be02p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_b1910012f17566919440def95cc5be02p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_b1910012f17566919440def95cc5be02p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_b1910012f17566919440def95cc5be02p@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:63079735..63079745,-#_b1910012f17566919440def95cc5be02p@chr4:63079735..63079745, -
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_b1910012f17566919440def95cc5be02p@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_b1910012f17566919440def95cc5be02p@chr15:65641779..65641790, +
1.87e-86FFCP PHASE1:Mm9::chr5:147854240..147854249,-#_b1910012f17566919440def95cc5be02p@chr5:147854240..147854249, -
1.87e-86FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_b1910012f17566919440def95cc5be02p@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_b1910012f17566919440def95cc5be02p3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_b1910012f17566919440def95cc5be02p@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_b1910012f17566919440def95cc5be02p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_b1910012f17566919440def95cc5be02p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_b1910012f17566919440def95cc5be02p@chr10:108316802..108316807, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251606..113251613,+#_b1910012f17566919440def95cc5be02p@chr6:113251606..113251613, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_b1910012f17566919440def95cc5be02p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_b1910012f17566919440def95cc5be02p@chr17:13983095..13983100, +
1.87e-86FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_b1910012f17566919440def95cc5be02p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_b1910012f17566919440def95cc5be02p@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_b1910012f17566919440def95cc5be02p2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13425469..13425503,+#_b1910012f17566919440def95cc5be02p@chr8:13425469..13425503, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_b1910012f17566919440def95cc5be02p2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_b1910012f17566919440def95cc5be02p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_b1910012f17566919440def95cc5be02p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_b1910012f17566919440def95cc5be02p@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_b1910012f17566919440def95cc5be02p@chr3:31585340..31585360, +

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