UBERON:0003051
From FANTOM5_SSTAR
| Name: | ear vesicle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The saccular invagination of ectoderm from which the vertebrate inner ear develops[BTO]. Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells[ZFA]. epithelial sac of invaginated ectoderm formed from the otic placode that gives rise to the structures of the inner ear[MP]" [BTO:0002661, MP:0009806, Wikipedia:Otic_vesicle, ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"auditory vesicle" RELATED [BTO:0002661] "otic vesicle" EXACT [] "otocyst" RELATED [] "OV" RELATED [] | ||
| Alt_id: |
UBERON:0004373 UBERON:XAO_0000006-ZFA_0000051 | ||
| Subset: | vertebrate_core |
Gray40.png]
200px-Gray40.png]
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
| is_a: | UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium) |
|---|---|
| develops_from: | UBERON:0009123(otic cup) |
| part_of: | UBERON:0000922(embryo),UBERON:0000924(ectoderm) |
Children
| develops from: | UBERON:0001846 (internal ear),UBERON:0012175 (acoustico-facial VII-VIII ganglion complex) |
|---|---|
| part of: | UBERON:0005641 (otocyst epithelium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003051 (ear vesicle), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_75fc3970308be340c9f348f4c3017776 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_75fc3970308be340c9f348f4c3017776 | p@chr7:139597684..139597691, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_75fc3970308be340c9f348f4c3017776 | p1@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:29935952..29935993,+#_75fc3970308be340c9f348f4c3017776 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:30619443..30619450,-#_75fc3970308be340c9f348f4c3017776 | p13@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_75fc3970308be340c9f348f4c3017776 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983095..13983100, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:94371127..94371139, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_75fc3970308be340c9f348f4c3017776 | p1@Dytn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:85334335..85334353, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:58626291..58626298,-#_75fc3970308be340c9f348f4c3017776 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_75fc3970308be340c9f348f4c3017776 | p@chr3:58626291..58626298, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:133802857..133802884,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_75fc3970308be340c9f348f4c3017776 | p41@Cacnb2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_75fc3970308be340c9f348f4c3017776 | p3@Ptprq |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42206784..42206793,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_75fc3970308be340c9f348f4c3017776 | p4@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:38104702..38104718, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:43454162..43454170, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:97806034..97806061, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_75fc3970308be340c9f348f4c3017776 | p5@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_75fc3970308be340c9f348f4c3017776 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:93235253..93235264, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_75fc3970308be340c9f348f4c3017776 | p6@Fam70b |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:50968647..50968668, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_75fc3970308be340c9f348f4c3017776 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_75fc3970308be340c9f348f4c3017776 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42206784..42206793, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_75fc3970308be340c9f348f4c3017776 | p2@9230102O04Rik |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_75fc3970308be340c9f348f4c3017776 | +, p@chr4:101908153..101908163 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_75fc3970308be340c9f348f4c3017776 | p2@Plscr5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_75fc3970308be340c9f348f4c3017776 | p1@Tmprss7 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_75fc3970308be340c9f348f4c3017776 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_75fc3970308be340c9f348f4c3017776 | p@chr19:55256373..55256384, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_75fc3970308be340c9f348f4c3017776 | p10@Sec11a |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_75fc3970308be340c9f348f4c3017776 | p@chr3:154693281..154693317, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_75fc3970308be340c9f348f4c3017776 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_75fc3970308be340c9f348f4c3017776 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:141605556..141605563, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:31283085..31283097, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_75fc3970308be340c9f348f4c3017776 | p2@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_75fc3970308be340c9f348f4c3017776 | p7@Tecta |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_75fc3970308be340c9f348f4c3017776 | p@chr14:102297728..102297742, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_75fc3970308be340c9f348f4c3017776 | p11@Tsga14 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_75fc3970308be340c9f348f4c3017776 | -, p@chr11:8405038..8405048 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_75fc3970308be340c9f348f4c3017776 | p1@Kncn |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:170417150..170417155, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:100724698..100724706, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:133802857..133802884, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_75fc3970308be340c9f348f4c3017776 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_75fc3970308be340c9f348f4c3017776 | p9@Otof |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257518..78257522, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_75fc3970308be340c9f348f4c3017776 | p@chr7:133957514..133957529, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_75fc3970308be340c9f348f4c3017776 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_75fc3970308be340c9f348f4c3017776 | +, p@chr18:81314626..81314636 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_75fc3970308be340c9f348f4c3017776 | p@chr8:13414266..13414279, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_75fc3970308be340c9f348f4c3017776 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_75fc3970308be340c9f348f4c3017776 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_75fc3970308be340c9f348f4c3017776 | p5@Fer1l6 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_75fc3970308be340c9f348f4c3017776 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:47293487..47293493, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_75fc3970308be340c9f348f4c3017776 | p1@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:27252925..27252939, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251606..113251613, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983102..13983126, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:4689776..4689785, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:154208086..154208123, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_75fc3970308be340c9f348f4c3017776 | p@chr10:108316802..108316807, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_75fc3970308be340c9f348f4c3017776 | p@chr15:103146966..103146971, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_75fc3970308be340c9f348f4c3017776 | p5@BC030867 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_75fc3970308be340c9f348f4c3017776 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_75fc3970308be340c9f348f4c3017776 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:89215306..89215315, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
