UBERON:0003051
From FANTOM5_SSTAR
| Name: | ear vesicle | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The saccular invagination of ectoderm from which the vertebrate inner ear develops[BTO]. Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells[ZFA]. epithelial sac of invaginated ectoderm formed from the otic placode that gives rise to the structures of the inner ear[MP]" [BTO:0002661, MP:0009806, Wikipedia:Otic_vesicle, ZFIN:curator] | ||
| Xrefs: |
| ||
| Synonyms: |
"auditory vesicle" RELATED [BTO:0002661] "otic vesicle" EXACT [] "otocyst" RELATED [] "OV" RELATED [] | ||
| Alt_id: |
UBERON:0004373 UBERON:XAO_0000006-ZFA_0000051 | ||
| Subset: | vertebrate_core |
Gray40.png]
200px-Gray40.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium) |
|---|---|
| develops_from: | UBERON:0009123(otic cup) |
| part_of: | UBERON:0000922(embryo),UBERON:0000924(ectoderm) |
Children
| develops from: | UBERON:0001846 (internal ear),UBERON:0012175 (acoustico-facial VII-VIII ganglion complex) |
|---|---|
| part of: | UBERON:0005641 (otocyst epithelium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003051 (ear vesicle), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_75fc3970308be340c9f348f4c3017776 | p3@Strc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_75fc3970308be340c9f348f4c3017776 | p3@Gm1322 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_75fc3970308be340c9f348f4c3017776 | p1@Tectb |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:3909310..3909321,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:3909310..3909321, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:89215319..89215330, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_75fc3970308be340c9f348f4c3017776 | p@chr13:58283583..58283607, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:128881546..128881553, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:73232344..73232356, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_75fc3970308be340c9f348f4c3017776 | p@chr13:37195838..37195870, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42207697..42207705, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:29733825..29733837, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_75fc3970308be340c9f348f4c3017776 | p1@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:13508015..13508019, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:56208792..56208814, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_75fc3970308be340c9f348f4c3017776 | p11@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_75fc3970308be340c9f348f4c3017776 | p2@uc007rhb.1 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:89215333..89215341, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_75fc3970308be340c9f348f4c3017776 | p1@Tomt |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:16651649..16651655, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_75fc3970308be340c9f348f4c3017776 | p2@Fscn2 |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:41495920..41495928, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_75fc3970308be340c9f348f4c3017776 | p@chr16:93971367..93971379, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:47293496..47293510, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_75fc3970308be340c9f348f4c3017776 | p@chr10:67371994..67372010, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_75fc3970308be340c9f348f4c3017776 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:55255289..55255299,+#_75fc3970308be340c9f348f4c3017776 | p2@Tectb |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:86746562..86746579, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:66033526..66033539, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:182528371..182528385, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_75fc3970308be340c9f348f4c3017776 | p@chr14:102297747..102297765, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_75fc3970308be340c9f348f4c3017776 | p@chr18:81314626..81314636, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_75fc3970308be340c9f348f4c3017776 | p@chr2:53464168..53464175, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:147854240..147854249,-#_75fc3970308be340c9f348f4c3017776 | p@chr5:147854240..147854249, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:60561636..60561645, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_75fc3970308be340c9f348f4c3017776 | p@chr2:53464178..53464186, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr8:13425469..13425503,+#_75fc3970308be340c9f348f4c3017776 | p@chr8:13425469..13425503, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_75fc3970308be340c9f348f4c3017776 | p3@Epyc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_75fc3970308be340c9f348f4c3017776 | p6@Jag1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251570..113251578, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_75fc3970308be340c9f348f4c3017776 | p@chr19:10536767..10536777, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:65641741..65641748, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_75fc3970308be340c9f348f4c3017776 | p@chr16:93971325..93971337, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:31585340..31585360, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:130461150..130461185, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:89702580..89702593,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:89702580..89702593, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_75fc3970308be340c9f348f4c3017776 | p1@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:94627290..94627299, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:43699228..43699239, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_75fc3970308be340c9f348f4c3017776 | p@chr9:66860888..66860899, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_75fc3970308be340c9f348f4c3017776 | p3@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257491..78257498, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:31283072..31283081, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_75fc3970308be340c9f348f4c3017776 | p4@Chrna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_75fc3970308be340c9f348f4c3017776 | p@chrX:154140781..154140788, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr11:75421384..75421397,+#_75fc3970308be340c9f348f4c3017776 | p@chr11:75421384..75421397, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:172843847..172843880, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:172843885..172843890, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:3909290..3909299, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42206745..42206774, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:35012397..35012405, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_75fc3970308be340c9f348f4c3017776 | p@chr7:27964761..27964768, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_75fc3970308be340c9f348f4c3017776 | p3@Tmprss3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42207375..42207384, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257454..78257465, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:152453066..152453075, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_75fc3970308be340c9f348f4c3017776 | p@chrX:154140800..154140810, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:150945209..150945220, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_75fc3970308be340c9f348f4c3017776 | p3@Otogl |
| 1.87e-86 | FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_75fc3970308be340c9f348f4c3017776 | p2@Gpr152 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:29428397..29428407, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:78523144..78523177, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:109905468..109905474, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_75fc3970308be340c9f348f4c3017776 | p2@Espnl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_75fc3970308be340c9f348f4c3017776 | p10@Tecta |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_75fc3970308be340c9f348f4c3017776 | p1@Kcna10 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_75fc3970308be340c9f348f4c3017776 | p2@Slc26a5 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:154459246..154459253, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:65641779..65641790, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:109905399..109905416, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:101908153..101908163, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_75fc3970308be340c9f348f4c3017776 | p2@Otol1 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr5:28035962..28035983,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:28035962..28035983, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr18:42158627..42158630,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:42158627..42158630, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_75fc3970308be340c9f348f4c3017776 | p7@Pkn3 |
| 1.87e-86 | FFCP PHASE2:Mm9::chr3:81012915..81012923,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:81012915..81012923, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_75fc3970308be340c9f348f4c3017776 | p@chr2:75320183..75320189, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:8405038..8405048, - |
| 1.87e-86 | FFCP PHASE2:Mm9::chr10:107349430..107349440,-#_75fc3970308be340c9f348f4c3017776 | p3@Otogl |
| 1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251614..113251623, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983179..13983190, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983198..13983203, + |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:77084875..77084885, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:86745686..86745727, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:12848147..12848162, + |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
