UBERON:0003051
From FANTOM5_SSTAR
Name: | ear vesicle | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "The saccular invagination of ectoderm from which the vertebrate inner ear develops[BTO]. Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells[ZFA]. epithelial sac of invaginated ectoderm formed from the otic placode that gives rise to the structures of the inner ear[MP]" [BTO:0002661, MP:0009806, Wikipedia:Otic_vesicle, ZFIN:curator] | ||
Xrefs: |
| ||
Synonyms: |
"auditory vesicle" RELATED [BTO:0002661] "otic vesicle" EXACT [] "otocyst" RELATED [] "OV" RELATED [] | ||
Alt_id: |
UBERON:0004373 UBERON:XAO_0000006-ZFA_0000051 | ||
Subset: | vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010371(ecto-epithelium) |
---|---|
develops_from: | UBERON:0009123(otic cup) |
part_of: | UBERON:0000922(embryo),UBERON:0000924(ectoderm) |
Children
develops from: | UBERON:0001846 (internal ear),UBERON:0012175 (acoustico-facial VII-VIII ganglion complex) |
---|---|
part of: | UBERON:0005641 (otocyst epithelium) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003051 (ear vesicle), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:130461150..130461185, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:16651649..16651655,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:16651649..16651655, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:97806034..97806061, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207965..42207978,-#_75fc3970308be340c9f348f4c3017776 | p5@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_75fc3970308be340c9f348f4c3017776 | p@chr19:10536767..10536777, - |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_75fc3970308be340c9f348f4c3017776 | p6@Fam70b |
1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:78523144..78523177, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:109905399..109905416, + |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_75fc3970308be340c9f348f4c3017776 | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_75fc3970308be340c9f348f4c3017776 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_75fc3970308be340c9f348f4c3017776 | p@chr9:66860888..66860899, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42206784..42206793,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42206784..42206793, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_75fc3970308be340c9f348f4c3017776 | p1@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:42158627..42158630, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_75fc3970308be340c9f348f4c3017776 | +, p@chr4:101908153..101908163 |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_75fc3970308be340c9f348f4c3017776 | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_75fc3970308be340c9f348f4c3017776 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_75fc3970308be340c9f348f4c3017776 | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_75fc3970308be340c9f348f4c3017776 | p@chr19:55256373..55256384, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_75fc3970308be340c9f348f4c3017776 | p10@Sec11a |
1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:120222470..120222516,+#_75fc3970308be340c9f348f4c3017776 | p2@Fscn2 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:78523144..78523177,+#_75fc3970308be340c9f348f4c3017776 | p@chr1:78523144..78523177, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_75fc3970308be340c9f348f4c3017776 | p@chr13:37195838..37195870, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:31283085..31283097, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_75fc3970308be340c9f348f4c3017776 | p2@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207777..42207789,-#_75fc3970308be340c9f348f4c3017776 | p7@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:77084875..77084885, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_75fc3970308be340c9f348f4c3017776 | +, p@chr2:75320183..75320189 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_75fc3970308be340c9f348f4c3017776 | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_75fc3970308be340c9f348f4c3017776 | p2@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_75fc3970308be340c9f348f4c3017776 | p1@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_75fc3970308be340c9f348f4c3017776 | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_75fc3970308be340c9f348f4c3017776 | -, p@chr11:8405038..8405048 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_75fc3970308be340c9f348f4c3017776 | p1@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_75fc3970308be340c9f348f4c3017776 | p9@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257518..78257522,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257518..78257522, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:133957514..133957529,+#_75fc3970308be340c9f348f4c3017776 | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:152453066..152453075, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_75fc3970308be340c9f348f4c3017776 | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_75fc3970308be340c9f348f4c3017776 | +, p@chr18:81314626..81314636 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_75fc3970308be340c9f348f4c3017776 | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13414266..13414279,+#_75fc3970308be340c9f348f4c3017776 | p@chr8:13414266..13414279, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971325..93971337,-#_75fc3970308be340c9f348f4c3017776 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_75fc3970308be340c9f348f4c3017776 | p5@Fer1l6 |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_75fc3970308be340c9f348f4c3017776 | p@chr4:133802857..133802884, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_75fc3970308be340c9f348f4c3017776 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_75fc3970308be340c9f348f4c3017776 | p1@Otol1 |
1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_75fc3970308be340c9f348f4c3017776 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_75fc3970308be340c9f348f4c3017776 | p@chr6:113251606..113251613, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:150945209..150945220, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_75fc3970308be340c9f348f4c3017776 | p@chr11:4689776..4689785, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_75fc3970308be340c9f348f4c3017776 | p@chr10:108316802..108316807, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:154459246..154459253, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_75fc3970308be340c9f348f4c3017776 | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_75fc3970308be340c9f348f4c3017776 | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_75fc3970308be340c9f348f4c3017776 | p1@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:65641779..65641790, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_75fc3970308be340c9f348f4c3017776 | p@chrX:154140800..154140810, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_75fc3970308be340c9f348f4c3017776 | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_75fc3970308be340c9f348f4c3017776 | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_75fc3970308be340c9f348f4c3017776 | p3@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_75fc3970308be340c9f348f4c3017776 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_75fc3970308be340c9f348f4c3017776 | p@chr2:128881546..128881553, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:136942131..136942142,-#_75fc3970308be340c9f348f4c3017776 | p6@Jag1 |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_75fc3970308be340c9f348f4c3017776 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_75fc3970308be340c9f348f4c3017776 | p3@Epyc |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_75fc3970308be340c9f348f4c3017776 | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_75fc3970308be340c9f348f4c3017776 | p1@Tomt |
1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_75fc3970308be340c9f348f4c3017776 | p2@Gpr152 |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_75fc3970308be340c9f348f4c3017776 | p1@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_75fc3970308be340c9f348f4c3017776 | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE1:Mm9::chr3:100724698..100724706,+#_75fc3970308be340c9f348f4c3017776 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_75fc3970308be340c9f348f4c3017776 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_75fc3970308be340c9f348f4c3017776 | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_75fc3970308be340c9f348f4c3017776 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_75fc3970308be340c9f348f4c3017776 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_75fc3970308be340c9f348f4c3017776 | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_75fc3970308be340c9f348f4c3017776 | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_75fc3970308be340c9f348f4c3017776 | p@chr13:48087761..48087775, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_75fc3970308be340c9f348f4c3017776 | p21@Espn |
1.87e-86 | FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_75fc3970308be340c9f348f4c3017776 | p@chr13:43699188..43699216, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_75fc3970308be340c9f348f4c3017776 | p@chr6:29428397..29428407, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_75fc3970308be340c9f348f4c3017776 | p1@Tmprss3 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Epithelial sac present beside the fifth rhombomere; forms the semicircular canals dorsally and the otolith organs ventrally, and houses the acoustico-vestibular sensory epithelia (maculae) of hair cells. Kimmel et al, 1995. (Also see Anatomical Atlas entry for ear by T. Whitfield.)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.