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Revision as of 17:26, 15 June 2012

Name:nephric duct
Definition:"A nephric duct is a tube that drains a primitive kidney[GO]." [GO:0072176]
Comments:pronephric duct or mesonephric duct

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000058(duct),UBERON:0003914(epithelial tube),UBERON:0004819(kidney epithelium),UBERON:0006553(renal duct),UBERON:0006555(excretory tube)
part_of:UBERON:0002113(kidney)



Children

is a:UBERON:0003060 (pronephric duct),UBERON:0003074 (mesonephric duct)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0009201 (nephric duct), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.58e-86FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
1.58e-86FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_e2abe83880ba1d2bc690a5cf9591ad22p4@Spink12
3.28e-58FFCP PHASE2:Mm9::chr1:90155966..90155989,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155966..90155989, +
3.28e-58FFCP PHASE2:Mm9::chr14:51627616..51627623,+#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase10
3.28e-58FFCP PHASE1:Mm9::chr9:35651679..35651691,-#_006addc8dc83332a4f4d9db9adb060d7p5@9230110F15Rik
3.28e-58FFCP PHASE2:Mm9::chrX:103276578..103276585,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:103276578..103276585, +
3.28e-58FFCP PHASE2:Mm9::chr13:21379118..21379120,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379118..21379120, -
3.28e-58FFCP PHASE2:Mm9::chr9:35585507..35585517,-#_006addc8dc83332a4f4d9db9adb060d7p4@Gm17727
3.28e-58FFCP PHASE1:Mm9::chr11:116901629..116901639,-#_006addc8dc83332a4f4d9db9adb060d7p3@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr11:59845376..59845393,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:59845376..59845393, -
3.28e-58FFCP PHASE2:Mm9::chr18:74784728..74784738,+#_006addc8dc83332a4f4d9db9adb060d7p@chr18:74784728..74784738, +
3.28e-58FFCP PHASE2:Mm9::chr9:26688157..26688159,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26688157..26688159, -
3.28e-58FFCP PHASE2:Mm9::chr14:52542661..52542668,-#_006addc8dc83332a4f4d9db9adb060d7p3@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr14:103746280..103746298,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:103746280..103746298, +
3.28e-58FFCP PHASE2:Mm9::chrX:130496372..130496393,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496372..130496393, -
3.28e-58FFCP PHASE1:Mm9::chr2:172632171..172632178,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:172632171..172632178, -
3.28e-58FFCP PHASE2:Mm9::chr13:23683348..23683398,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:23683348..23683398, +
3.28e-58FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19141429..19141440, +
3.28e-58FFCP PHASE2:Mm9::chr9:34813361..34813403,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:34813361..34813403, -
3.28e-58FFCP PHASE1:Mm9::chr14:52608712..52608739,+#_006addc8dc83332a4f4d9db9adb060d7p11@Arhgef40
3.28e-58FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379372..21379404, +
3.28e-58FFCP PHASE2:Mm9::chr13:21378871..21378901,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21378871..21378901, -
3.28e-58FFCP PHASE1:Mm9::chr1:90155923..90155932,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155923..90155932, +
3.28e-58FFCP PHASE1:Mm9::chr4:134913640..134913649,+#_006addc8dc83332a4f4d9db9adb060d7p@chr4:134913640..134913649, +
3.28e-58FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:74440187..74440209, -
3.28e-58FFCP PHASE2:Mm9::chr9:26611214..26611227,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26611214..26611227, -
3.28e-58FFCP PHASE1:Mm9::chr7:109379335..109379338,+#_006addc8dc83332a4f4d9db9adb060d7p21@Pgap2
3.28e-58FFCP PHASE2:Mm9::chr5:31379477..31379481,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379477..31379481, +
3.28e-58FFCP PHASE2:Mm9::chr18:44264128..44264135,+#_006addc8dc83332a4f4d9db9adb060d7p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr6:118298429..118298448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr6:118298429..118298448, +
3.28e-58FFCP PHASE1:Mm9::chr14:51734060..51734066,+#_006addc8dc83332a4f4d9db9adb060d7p5@Eddm3b
3.28e-58FFCP PHASE1:Mm9::chr13:21379159..21379162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21379159..21379162, -
3.28e-58FFCP PHASE1:Mm9::chr8:19142604..19142612,+#_006addc8dc83332a4f4d9db9adb060d7p@chr8:19142604..19142612, +
3.28e-58FFCP PHASE2:Mm9::chr1:89597834..89597840,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89597834..89597840, +
3.28e-58FFCP PHASE2:Mm9::chr11:116901629..116901639,-#_006addc8dc83332a4f4d9db9adb060d7p3@uc007mmw.1
3.28e-58FFCP PHASE2:Mm9::chr11:101958876..101958883,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958876..101958883, +
3.28e-58FFCP PHASE1:Mm9::chr1:89596972..89596981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:89596972..89596981, +
3.28e-58FFCP PHASE2:Mm9::chr16:22504758..22504766,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70761931..70761971, +
3.28e-58FFCP PHASE1:Mm9::chr1:11079838..11079844,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:11079838..11079844, +
3.28e-58FFCP PHASE2:Mm9::chr14:51677141..51677148,-#_006addc8dc83332a4f4d9db9adb060d7p7@Rnase12
3.28e-58FFCP PHASE1:Mm9::chrX:164787162..164787188,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:164787162..164787188, -
3.28e-58FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:50280126..50280140, +
3.28e-58FFCP PHASE1:Mm9::chr5:31379437..31379448,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379437..31379448, +
3.28e-58FFCP PHASE2:Mm9::chr7:151928014..151928021,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151928014..151928021, +
3.28e-58FFCP PHASE1:Mm9::chr11:53955299..53955306,+#_006addc8dc83332a4f4d9db9adb060d7p@chr11:53955299..53955306, +
3.28e-58FFCP PHASE2:Mm9::chr16:23308182..23308185,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:23308182..23308185, +
3.28e-58FFCP PHASE1:Mm9::chr14:51676936..51676963,-#_006addc8dc83332a4f4d9db9adb060d7p6@Rnase12
3.28e-58FFCP PHASE2:Mm9::chr2:25678985..25679033,+#_006addc8dc83332a4f4d9db9adb060d7p@chr2:25678985..25679033, +
3.28e-58FFCP PHASE2:Mm9::chr14:69143309..69143319,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr15:83143938..83143953,-#_006addc8dc83332a4f4d9db9adb060d7p@chr15:83143938..83143953, -
3.28e-58FFCP PHASE1:Mm9::chr11:101958844..101958851,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101958844..101958851, -
3.28e-58FFCP PHASE1:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chrX:75798132..75798152,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:75798132..75798152, -
3.28e-58FFCP PHASE1:Mm9::chr9:26785438..26785446,-#_006addc8dc83332a4f4d9db9adb060d7p3@Acad8
3.28e-58FFCP PHASE1:Mm9::chr8:23057222..23057234,+#_006addc8dc83332a4f4d9db9adb060d7p1@Defb13
3.28e-58FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_006addc8dc83332a4f4d9db9adb060d7p4@Atp4a
3.28e-58FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE1:Mm9::chr13:52712744..52712754,+#_006addc8dc83332a4f4d9db9adb060d7p@chr13:52712744..52712754, +
3.28e-58FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_006addc8dc83332a4f4d9db9adb060d7p@chr17:35249011..35249020, -
3.28e-58FFCP PHASE1:Mm9::chr6:83487114..83487124,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:83487114..83487124, -
3.28e-58FFCP PHASE1:Mm9::chr14:69143309..69143319,-#_006addc8dc83332a4f4d9db9adb060d7p@chr14:69143309..69143319, -
3.28e-58FFCP PHASE1:Mm9::chr10:52101299..52101305,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:52101299..52101305, +
3.28e-58FFCP PHASE2:Mm9::chr9:26727675..26727681,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26727675..26727681, -
3.28e-58FFCP PHASE2:Mm9::chr2:164434157..164434162,-#_006addc8dc83332a4f4d9db9adb060d7p@chr2:164434157..164434162, -
3.28e-58FFCP PHASE2:Mm9::chr14:52608712..52608739,+#_006addc8dc83332a4f4d9db9adb060d7p11@Arhgef40
3.28e-58FFCP PHASE2:Mm9::chr12:110132148..110132154,+#_006addc8dc83332a4f4d9db9adb060d7p3@Wdr25
3.28e-58FFCP PHASE1:Mm9::chr15:75329148..75329155,+#_006addc8dc83332a4f4d9db9adb060d7p@chr15:75329148..75329155, +
3.28e-58FFCP PHASE2:Mm9::chr14:63630486..63630493,+#_006addc8dc83332a4f4d9db9adb060d7p5@Defb43
3.28e-58FFCP PHASE1:Mm9::chrX:10488683..10488691,+#_006addc8dc83332a4f4d9db9adb060d7p@chrX:10488683..10488691, +
3.28e-58FFCP PHASE1:Mm9::chr9:26719400..26719404,-#_006addc8dc83332a4f4d9db9adb060d7p@chr9:26719400..26719404, -
3.28e-58FFCP PHASE2:Mm9::chr18:46301295..46301302,-#_006addc8dc83332a4f4d9db9adb060d7p@chr18:46301295..46301302, -
3.28e-58FFCP PHASE2:Mm9::chr1:168436322..168436326,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:168436322..168436326, -
3.28e-58FFCP PHASE2:Mm9::chr1:155697874..155697885,-#_006addc8dc83332a4f4d9db9adb060d7p@chr1:155697874..155697885, -
3.28e-58FFCP PHASE1:Mm9::chr13:21381141..21381155,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21381141..21381155, -
3.28e-58FFCP PHASE1:Mm9::chr13:21385325..21385329,-#_006addc8dc83332a4f4d9db9adb060d7p@chr13:21385325..21385329, -
3.28e-58FFCP PHASE2:Mm9::chr16:43230846..43230884,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:43230846..43230884, +
3.28e-58FFCP PHASE2:Mm9::chr8:25706083..25706089,-#_006addc8dc83332a4f4d9db9adb060d7p4@Ido1
3.28e-58FFCP PHASE1:Mm9::chr1:90368977..90368987,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90368977..90368987, +
3.28e-58FFCP PHASE1:Mm9::chr14:66521865..66521876,+#_006addc8dc83332a4f4d9db9adb060d7p@chr14:66521865..66521876, +
3.28e-58FFCP PHASE1:Mm9::chr18:44264128..44264135,+#_006addc8dc83332a4f4d9db9adb060d7p5@Spink12
3.28e-58FFCP PHASE2:Mm9::chr10:116399500..116399516,+#_006addc8dc83332a4f4d9db9adb060d7p@chr10:116399500..116399516, +
3.28e-58FFCP PHASE2:Mm9::chrX:130496260..130496269,-#_006addc8dc83332a4f4d9db9adb060d7p@chrX:130496260..130496269, -
3.28e-58FFCP PHASE2:Mm9::chr8:107073888..107073914,-#_006addc8dc83332a4f4d9db9adb060d7p@chr8:107073888..107073914, -
3.28e-58FFCP PHASE2:Mm9::chr17:73221034..73221051,+#_006addc8dc83332a4f4d9db9adb060d7p@chr17:73221034..73221051, +
3.28e-58FFCP PHASE2:Mm9::chr5:31379972..31379981,+#_006addc8dc83332a4f4d9db9adb060d7p@chr5:31379972..31379981, +
3.28e-58FFCP PHASE1:Mm9::chr19:17585885..17585901,-#_006addc8dc83332a4f4d9db9adb060d7p@chr19:17585885..17585901, -
3.28e-58FFCP PHASE1:Mm9::chr14:52542711..52542716,-#_006addc8dc83332a4f4d9db9adb060d7p2@Rnase13
3.28e-58FFCP PHASE2:Mm9::chr1:90155722..90155743,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:90155722..90155743, +
3.28e-58FFCP PHASE1:Mm9::chr7:151927980..151927988,+#_006addc8dc83332a4f4d9db9adb060d7p@chr7:151927980..151927988, +
3.28e-58FFCP PHASE1:Mm9::chr6:147624258..147624285,-#_006addc8dc83332a4f4d9db9adb060d7p@chr6:147624258..147624285, -
3.28e-58FFCP PHASE2:Mm9::chr16:25752183..25752203,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:25752183..25752203, +
3.28e-58FFCP PHASE2:Mm9::chr11:101959282..101959299,-#_006addc8dc83332a4f4d9db9adb060d7p@chr11:101959282..101959299, -
3.28e-58FFCP PHASE1:Mm9::chr16:22504758..22504766,-#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22504758..22504766, -
3.28e-58FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_006addc8dc83332a4f4d9db9adb060d7p@chr1:156048695..156048707, +
3.28e-58FFCP PHASE2:Mm9::chr16:22547027..22547063,+#_006addc8dc83332a4f4d9db9adb060d7p@chr16:22547027..22547063, +
3.28e-58FFCP PHASE2:Mm9::chr9:70779586..70779596,+#_006addc8dc83332a4f4d9db9adb060d7p@chr9:70779586..70779596, +
3.28e-58FFCP PHASE2:Mm9::chr7:6204391..6204398,+#_006addc8dc83332a4f4d9db9adb060d7p2@Gm6792
3.28e-58FFCP PHASE2:Mm9::chr12:114385720..114385732,-#_006addc8dc83332a4f4d9db9adb060d7p@chr12:114385720..114385732, -

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