CL:0000817: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{CL
|id=CL:0000817
|name=precursor B cell
|namespace=cell
|def="A precursor B cell is a B cell with the phenotype CD10-positive." [GO_REF:0000031, GOC:rhs, GOC:tfm]
|xre...") |
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|id=CL:0000817 | |id=CL:0000817 | ||
|name=precursor B cell | |name=precursor B cell | ||
|namespace= | |namespace=efo | ||
|def="A precursor B cell is a B cell with the phenotype CD10-positive." [GO_REF:0000031, GOC:rhs, GOC:tfm] | |def="A precursor B cell is a B cell with the phenotype CD10-positive." [GO_REF:0000031, GOC:rhs, GOC:tfm] | ||
|xref=BTO:0001133 | |xref=BTO:0001133 | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl | |||
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Revision as of 17:39, 15 June 2012
| Name: | precursor B cell | ||
|---|---|---|---|
| Namespace: | efo | ||
| Definition: | "A precursor B cell is a B cell with the phenotype CD10-positive." [GO_REF:0000031, GOC:rhs, GOC:tfm] | ||
| Xrefs: |
| ||
| Synonyms: | "pre-B cell" EXACT [] |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000236(B cell) |
|---|---|
| disjoint_from: | CL:0000826(pro-B cell) |
Children
| is a: | CL:0000816 (immature B cell),CL:0000955 (pre-B-II cell) |
|---|---|
| disjoint from: | CL:0000785 (mature B cell) |
| derives from: | FF:0100603 (pre-B acute lymphoblastic leukemia cell line sample) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10534-107G3 (acute lymphoblastic leukemia (B-ALL) cell line:NALM-6)
Mouse (Mus musculus)
- 10534-107G3 (acute lymphoblastic leukemia (B-ALL) cell line:NALM-6)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000817 (precursor B cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:37327716..37327725,+#_eae8735d254daa77b641f1a87ea39066 | p12@ZCCHC7 |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:37327677..37327701,+#_eae8735d254daa77b641f1a87ea39066 | p9@ZCCHC7 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr7:47225953..47225964,-#_eae8735d254daa77b641f1a87ea39066 | p@chr7:47225953..47225964, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr2:54855884..54855893,+#_eae8735d254daa77b641f1a87ea39066 | p@chr2:54855884..54855893, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr9:37327716..37327725,+#_eae8735d254daa77b641f1a87ea39066 | p12@ZCCHC7 |
| 8.98e-131 | FFCP PHASE2:Hg19::chr7:47225965..47225970,-#_eae8735d254daa77b641f1a87ea39066 | p@chr7:47225965..47225970, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr7:47225953..47225964,-#_eae8735d254daa77b641f1a87ea39066 | p@chr7:47225953..47225964, - |
| 8.98e-131 | FFCP PHASE1:Hg19::chr2:54855884..54855893,+#_eae8735d254daa77b641f1a87ea39066 | p@chr2:54855884..54855893, + |
| 8.98e-131 | FFCP PHASE1:Hg19::chr7:47225965..47225970,-#_eae8735d254daa77b641f1a87ea39066 | p@chr7:47225965..47225970, - |
| 8.98e-131 | FFCP PHASE2:Hg19::chr9:37327677..37327701,+#_eae8735d254daa77b641f1a87ea39066 | p9@ZCCHC7 |
| 6.24e-88 | FFCP PHASE2:Hg19::chrX:42815602..42815616,-#_b964d6ec0e61ff343c425d2be638de9c | p@chrX:42815602..42815616, - |
| 6.24e-88 | FFCP PHASE1:Hg19::chrX:42815602..42815616,-#_b964d6ec0e61ff343c425d2be638de9c | p@chrX:42815602..42815616, - |
| 1.52e-87 | FFCP PHASE2:Hg19::chr4:144312629..144312638,+#_1191a5d88af5662268f8290275fc8e44 | p30@GAB1 |
| 1.52e-87 | FFCP PHASE1:Hg19::chr4:144312629..144312638,+#_1191a5d88af5662268f8290275fc8e44 | p30@GAB1 |
| 1.29e-74 | FFCP PHASE2:Hg19::chr20:52346373..52346376,-#_fa2402e8b88e04fd16200331125eb6d5 | p@chr20:52346373..52346376, - |
| 1.29e-74 | FFCP PHASE1:Hg19::chr20:52346373..52346376,-#_fa2402e8b88e04fd16200331125eb6d5 | p@chr20:52346373..52346376, - |
| 5.84e-74 | FFCP PHASE2:Hg19::chr20:45891250..45891274,-#_7324083e888d09b59917b2f4f2500114 | p32@ZMYND8 |
| 5.84e-74 | FFCP PHASE1:Hg19::chr20:45891250..45891274,-#_7324083e888d09b59917b2f4f2500114 | p32@ZMYND8 |
| 7.51e-74 | FFCP PHASE1:Hg19::chr12:49555310..49555317,+#_0b89b710d65656916caa1ee8810a1626 | p@chr12:49555310..49555317, + |
| 7.51e-74 | FFCP PHASE2:Hg19::chr12:49555310..49555317,+#_0b89b710d65656916caa1ee8810a1626 | p@chr12:49555310..49555317, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:77581116..77581120,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr2:77581116..77581120, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:23213535..23213539,+#_30e281f8e698990a741f9f7b0d8cc8ab | p4@IGLV4-3 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr7:86415255..86415288,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr7:86415255..86415288, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:56410468..56410499,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr10:56410468..56410499, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:168337915..168337930,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:168337915..168337930, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:101853882..101853891,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr1:101853882..101853891, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr21:20752389..20752420,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr21:20752389..20752420, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr14:53594794..53594799,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr14:53594794..53594799, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:88646759..88646764,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:88646759..88646764, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:157336889..157336907,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:157336889..157336907, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:146411403..146411429,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr4:146411403..146411429, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:166581583..166581586,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:166581583..166581586, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr5:157816902..157816905,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:157816902..157816905, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr22:48976727..48976745,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr22:48976727..48976745, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chrY:14649728..14649734,+#_30e281f8e698990a741f9f7b0d8cc8ab | p5@SHROOM2P1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:40953942..40953946,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:40953942..40953946, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:19436672..19436686,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:19436672..19436686, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:39962337..39962342,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:39962337..39962342, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr22:22599175..22599177,+#_30e281f8e698990a741f9f7b0d8cc8ab | p4@VPREB1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:8808206..8808209,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:8808206..8808209, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:126941733..126941746,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:126941733..126941746, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chrX:154028053..154028060,-#_30e281f8e698990a741f9f7b0d8cc8ab | p21@MPP1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr11:26124040..26124064,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr11:26124040..26124064, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:1609627..1609637,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr10:1609627..1609637, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr21:20867728..20867731,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr21:20867728..20867731, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:122462770..122462775,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:122462770..122462775, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:8046990..8046993,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr4:8046990..8046993, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:22599075..22599079,+#_30e281f8e698990a741f9f7b0d8cc8ab | p6@VPREB1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:114291872..114291873,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:114291872..114291873, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:97802785..97802826,+#_30e281f8e698990a741f9f7b0d8cc8ab | p5@CCNJ |
| 2.39e-66 | FFCP PHASE2:Hg19::chr20:58045652..58045658,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr20:58045652..58045658, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:164466325..164466331,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:164466325..164466331, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:26122006..26122011,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr11:26122006..26122011, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr22:23214117..23214120,+#_30e281f8e698990a741f9f7b0d8cc8ab | p3@AM184012, p3@AM184013, p3@AM184014, p3@AM184015 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:4313331..4313334,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:4313331..4313334, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:205827116..205827123,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr1:205827116..205827123, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:77746775..77746779,-#_30e281f8e698990a741f9f7b0d8cc8ab | p14@LRRTM4 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:130424330..130424335,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr11:130424330..130424335, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr2:18730657..18730670,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr2:18730657..18730670, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:58045621..58045634,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr20:58045621..58045634, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr14:106829914..106829921,-#_30e281f8e698990a741f9f7b0d8cc8ab | p1@HM996258, p1@HM996415, p1@HM996438 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:158747347..158747353,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:158747347..158747353, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr1:17349613..17349631,-#_30e281f8e698990a741f9f7b0d8cc8ab | p8@SDHB |
| 2.39e-66 | FFCP PHASE1:Hg19::chr21:20752617..20752622,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr21:20752617..20752622, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chrX:42727038..42727047,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chrX:42727038..42727047, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:6686484..6686491,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:6686484..6686491, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:166581590..166581596,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:166581590..166581596, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr1:156314455..156314464,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr1:156314455..156314464, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:175229206..175229218,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:175229206..175229218, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:176353908..176353917,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr4:176353908..176353917, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr7:2109002..2109005,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr7:2109002..2109005, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:79363599..79363606,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:79363599..79363606, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr2:77581116..77581120,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr2:77581116..77581120, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:88646759..88646764,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:88646759..88646764, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr10:1610285..1610290,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr10:1610285..1610290, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:164466345..164466352,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:164466345..164466352, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:178947187..178947192,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:178947187..178947192, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:22599175..22599177,+#_30e281f8e698990a741f9f7b0d8cc8ab | p4@VPREB1 |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:3881462..3881469,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr4:3881462..3881469, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chrX:89012355..89012363,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chrX:89012355..89012363, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr5:157816902..157816905,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr5:157816902..157816905, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:48976727..48976745,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr22:48976727..48976745, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr13:114062339..114062349,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr13:114062339..114062349, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:19436672..19436686,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr3:19436672..19436686, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:138904824..138904829,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr9:138904824..138904829, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr8:128270027..128270033,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr8:128270027..128270033, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr11:26124040..26124064,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr11:26124040..26124064, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:4313331..4313334,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:4313331..4313334, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:1609627..1609637,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr10:1609627..1609637, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chrX:154028053..154028060,-#_30e281f8e698990a741f9f7b0d8cc8ab | p21@MPP1 |
| 2.39e-66 | FFCP PHASE1:Hg19::chr15:53828219..53828224,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr15:53828219..53828224, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr12:122458855..122458857,+#_30e281f8e698990a741f9f7b0d8cc8ab | p16@BCL7A |
| 2.39e-66 | FFCP PHASE1:Hg19::chr20:58045652..58045658,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr20:58045652..58045658, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:39962295..39962305,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:39962295..39962305, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr10:97802785..97802826,+#_30e281f8e698990a741f9f7b0d8cc8ab | p5@CCNJ |
| 2.39e-66 | FFCP PHASE1:Hg19::chr6:164466325..164466331,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr6:164466325..164466331, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr9:97261442..97261444,+#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr9:97261442..97261444, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr12:8808206..8808209,-#_30e281f8e698990a741f9f7b0d8cc8ab | p@chr12:8808206..8808209, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr6:166581265..166581274,-#_30e281f8e698990a741f9f7b0d8cc8ab | p5@T |
| 2.39e-66 | FFCP PHASE1:Hg19::chr22:23214117..23214120,+#_30e281f8e698990a741f9f7b0d8cc8ab | p3@AM184012, p3@AM184013, p3@AM184014, p3@AM184015 |
