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|id=CL:0000911
|id=CL:0000911
|name=effector T cell
|name=effector T cell
|namespace=cell
|namespace=efo
|def="A differentiated T cell with ability to traffic to peripheral tissues and is capable of mounting a specific immune response." [GOC:PAM-ADD, GOC:tfm, ISBN:0877799148, PMID:18395547]
|def="A differentiated T cell with ability to traffic to peripheral tissues and is capable of mounting a specific immune response." [GOC:PAM-ADD, GOC:tfm, ISBN:0877799148, PMID:18395547]
|xref=
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl;;IAO:0000412 http://purl.obolibrary.org/obo/efo.obo.owl
|is_obsolete=
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}}
}}

Revision as of 17:39, 15 June 2012

Name:effector T cell
Namespace:efo
Definition:"A differentiated T cell with ability to traffic to peripheral tissues and is capable of mounting a specific immune response." [GOC:PAM-ADD, GOC:tfm, ISBN:0877799148, PMID:18395547]
Synonyms: "effector T lymphocyte" EXACT []
"effector T-cell" EXACT []
"effector T-lymphocyte" EXACT []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0002419(mature T cell)



Children


is a:CL:0002127 (innate effector T cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000911 (effector T cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr10:11846830..11846860,-#_63648a6e12540d71440d0b996f34a743p@chr10:11846830..11846860, -
5.42e-195FFCP PHASE1:Hg19::chr21:43982135..43982142,+#_63648a6e12540d71440d0b996f34a743p@chr21:43982135..43982142, +
5.42e-195FFCP PHASE1:Hg19::chr17:14103251..14103258,+#_63648a6e12540d71440d0b996f34a743p@chr17:14103251..14103258, +
5.42e-195FFCP PHASE1:Hg19::chr2:146687090..146687095,+#_63648a6e12540d71440d0b996f34a743p@chr2:146687090..146687095, +
5.42e-195FFCP PHASE1:Hg19::chr21:39490932..39490937,+#_63648a6e12540d71440d0b996f34a743p@chr21:39490932..39490937, +
5.42e-195FFCP PHASE2:Hg19::chr7:38287827..38287832,-#_63648a6e12540d71440d0b996f34a743p@chr7:38287827..38287832, -
5.42e-195FFCP PHASE1:Hg19::chr4:175842511..175842520,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842511..175842520, -
5.42e-195FFCP PHASE2:Hg19::chr4:128884938..128884941,-#_63648a6e12540d71440d0b996f34a743p@chr4:128884938..128884941, -
5.42e-195FFCP PHASE2:Hg19::chr9:4544914..4544917,-#_63648a6e12540d71440d0b996f34a743p@chr9:4544914..4544917, -
5.42e-195FFCP PHASE2:Hg19::chr8:67519931..67519935,-#_63648a6e12540d71440d0b996f34a743p@chr8:67519931..67519935, -
5.42e-195FFCP PHASE2:Hg19::chr2:162762231..162762234,+#_63648a6e12540d71440d0b996f34a743p@chr2:162762231..162762234, +
5.42e-195FFCP PHASE1:Hg19::chr1:200990231..200990238,-#_63648a6e12540d71440d0b996f34a743p@chr1:200990231..200990238, -
5.42e-195FFCP PHASE2:Hg19::chr4:2428062..2428080,+#_63648a6e12540d71440d0b996f34a743p1@uc003gfa.1
5.42e-195FFCP PHASE2:Hg19::chr3:192598433..192598481,-#_63648a6e12540d71440d0b996f34a743p@chr3:192598433..192598481, -
5.42e-195FFCP PHASE2:Hg19::chr2:141989111..141989114,-#_63648a6e12540d71440d0b996f34a743p@chr2:141989111..141989114, -
5.42e-195FFCP PHASE1:Hg19::chr9:116857558..116857566,-#_63648a6e12540d71440d0b996f34a743p@chr9:116857558..116857566, -
5.42e-195FFCP PHASE1:Hg19::chr15:69972162..69972169,+#_63648a6e12540d71440d0b996f34a743p@chr15:69972162..69972169, +
5.42e-195FFCP PHASE2:Hg19::chr8:75251775..75251785,+#_63648a6e12540d71440d0b996f34a743p@chr8:75251775..75251785, +
5.42e-195FFCP PHASE2:Hg19::chr13:24623546..24623587,-#_63648a6e12540d71440d0b996f34a743p@chr13:24623546..24623587, -
5.42e-195FFCP PHASE1:Hg19::chr4:134707474..134707504,-#_63648a6e12540d71440d0b996f34a743p@chr4:134707474..134707504, -
5.42e-195FFCP PHASE2:Hg19::chr6:128263833..128263838,-#_63648a6e12540d71440d0b996f34a743p@chr6:128263833..128263838, -
5.42e-195FFCP PHASE1:Hg19::chr7:117926347..117926353,-#_63648a6e12540d71440d0b996f34a743p@chr7:117926347..117926353, -
5.42e-195FFCP PHASE1:Hg19::chr9:72117884..72117889,-#_63648a6e12540d71440d0b996f34a743p@chr9:72117884..72117889, -
5.42e-195FFCP PHASE2:Hg19::chr15:92006659..92006679,+#_63648a6e12540d71440d0b996f34a743p2@uc002bqw.2
5.42e-195FFCP PHASE1:Hg19::chr4:105805755..105805761,+#_63648a6e12540d71440d0b996f34a743p@chr4:105805755..105805761, +
5.42e-195FFCP PHASE1:Hg19::chr8:114877856..114877881,-#_63648a6e12540d71440d0b996f34a743p@chr8:114877856..114877881, -
5.42e-195FFCP PHASE2:Hg19::chr4:134707420..134707442,-#_63648a6e12540d71440d0b996f34a743p@chr4:134707420..134707442, -
5.42e-195FFCP PHASE1:Hg19::chr2:146998057..146998070,-#_63648a6e12540d71440d0b996f34a743p@chr2:146998057..146998070, -
5.42e-195FFCP PHASE1:Hg19::chr15:91989101..91989105,+#_63648a6e12540d71440d0b996f34a743p@chr15:91989101..91989105, +
5.42e-195FFCP PHASE1:Hg19::chr4:175842537..175842553,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842537..175842553, -
5.42e-195FFCP PHASE2:Hg19::chr4:133657589..133657598,-#_63648a6e12540d71440d0b996f34a743p@chr4:133657589..133657598, -
5.42e-195FFCP PHASE2:Hg19::chr17:14101134..14101143,+#_63648a6e12540d71440d0b996f34a743p@chr17:14101134..14101143, +
5.42e-195FFCP PHASE2:Hg19::chr7:19479837..19479844,+#_63648a6e12540d71440d0b996f34a743p@chr7:19479837..19479844, +
5.42e-195FFCP PHASE2:Hg19::chr5:24272119..24272147,-#_63648a6e12540d71440d0b996f34a743p@chr5:24272119..24272147, -
5.42e-195FFCP PHASE1:Hg19::chr9:87797549..87797564,+#_63648a6e12540d71440d0b996f34a743p@chr9:87797549..87797564, +
5.42e-195FFCP PHASE1:Hg19::chr16:67022522..67022529,+#_63648a6e12540d71440d0b996f34a743p12@CES4A
5.42e-195FFCP PHASE2:Hg19::chr14:22962827..22962830,+#_63648a6e12540d71440d0b996f34a743p3@uc001weo.2
5.42e-195FFCP PHASE1:Hg19::chr22:46041912..46041915,+#_63648a6e12540d71440d0b996f34a743p@chr22:46041912..46041915, +
5.42e-195FFCP PHASE1:Hg19::chr1:237900222..237900230,+#_63648a6e12540d71440d0b996f34a743p@chr1:237900222..237900230, +
5.42e-195FFCP PHASE2:Hg19::chr4:175842470..175842486,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842470..175842486, -
5.42e-195FFCP PHASE2:Hg19::chr16:67022368..67022374,-#_63648a6e12540d71440d0b996f34a743p@chr16:67022368..67022374, -
5.42e-195FFCP PHASE1:Hg19::chr3:152204326..152204345,+#_63648a6e12540d71440d0b996f34a743p@chr3:152204326..152204345, +
5.42e-195FFCP PHASE2:Hg19::chr2:146687090..146687095,+#_63648a6e12540d71440d0b996f34a743p@chr2:146687090..146687095, +
5.42e-195FFCP PHASE1:Hg19::chr1:189141918..189141929,+#_63648a6e12540d71440d0b996f34a743p@chr1:189141918..189141929, +
5.42e-195FFCP PHASE2:Hg19::chr4:111448516..111448521,+#_63648a6e12540d71440d0b996f34a743p@chr4:111448516..111448521, +
5.42e-195FFCP PHASE2:Hg19::chr4:176123823..176123829,+#_63648a6e12540d71440d0b996f34a743p@chr4:176123823..176123829, +
5.42e-195FFCP PHASE1:Hg19::chr2:202521027..202521058,-#_63648a6e12540d71440d0b996f34a743p@chr2:202521027..202521058, -
5.42e-195FFCP PHASE2:Hg19::chr15:92006720..92006726,+#_63648a6e12540d71440d0b996f34a743p1@uc002bqw.2
5.42e-195FFCP PHASE1:Hg19::chr8:16739475..16739490,-#_63648a6e12540d71440d0b996f34a743p@chr8:16739475..16739490, -
5.42e-195FFCP PHASE1:Hg19::chr21:47278815..47278834,+#_63648a6e12540d71440d0b996f34a743p6@PCBP3
5.42e-195FFCP PHASE2:Hg19::chr4:134707449..134707458,-#_63648a6e12540d71440d0b996f34a743p@chr4:134707449..134707458, -
5.42e-195FFCP PHASE1:Hg19::chr8:51970952..51970959,+#_63648a6e12540d71440d0b996f34a743p@chr8:51970952..51970959, +
5.42e-195FFCP PHASE1:Hg19::chr15:91989133..91989141,+#_63648a6e12540d71440d0b996f34a743p@chr15:91989133..91989141, +
5.42e-195FFCP PHASE1:Hg19::chr4:175858389..175858405,-#_63648a6e12540d71440d0b996f34a743p@chr4:175858389..175858405, -
5.42e-195FFCP PHASE2:Hg19::chr4:133657651..133657654,-#_63648a6e12540d71440d0b996f34a743p@chr4:133657651..133657654, -
5.42e-195FFCP PHASE1:Hg19::chrX:133321044..133321049,+#_63648a6e12540d71440d0b996f34a743p@chrX:133321044..133321049, +
5.42e-195FFCP PHASE2:Hg19::chr17:14103251..14103258,+#_63648a6e12540d71440d0b996f34a743p@chr17:14103251..14103258, +
5.42e-195FFCP PHASE2:Hg19::chr21:43982135..43982142,+#_63648a6e12540d71440d0b996f34a743p@chr21:43982135..43982142, +
5.42e-195FFCP PHASE1:Hg19::chr7:38287827..38287832,-#_63648a6e12540d71440d0b996f34a743p@chr7:38287827..38287832, -
5.42e-195FFCP PHASE1:Hg19::chr4:128884938..128884941,-#_63648a6e12540d71440d0b996f34a743p@chr4:128884938..128884941, -
5.42e-195FFCP PHASE1:Hg19::chr9:4544914..4544917,-#_63648a6e12540d71440d0b996f34a743p@chr9:4544914..4544917, -
5.42e-195FFCP PHASE2:Hg19::chr21:39490932..39490937,+#_63648a6e12540d71440d0b996f34a743p@chr21:39490932..39490937, +
5.42e-195FFCP PHASE1:Hg19::chr10:11846830..11846860,-#_63648a6e12540d71440d0b996f34a743p@chr10:11846830..11846860, -
5.42e-195FFCP PHASE2:Hg19::chr4:175842511..175842520,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842511..175842520, -
5.42e-195FFCP PHASE1:Hg19::chr13:49078833..49078841,-#_63648a6e12540d71440d0b996f34a743p@chr13:49078833..49078841, -
5.42e-195FFCP PHASE2:Hg19::chr2:146998057..146998070,-#_63648a6e12540d71440d0b996f34a743p@chr2:146998057..146998070, -
5.42e-195FFCP PHASE1:Hg19::chr8:50081052..50081075,-#_63648a6e12540d71440d0b996f34a743p@chr8:50081052..50081075, -
5.42e-195FFCP PHASE2:Hg19::chr1:200990231..200990238,-#_63648a6e12540d71440d0b996f34a743p@chr1:200990231..200990238, -
5.42e-195FFCP PHASE2:Hg19::chr22:46041912..46041915,+#_63648a6e12540d71440d0b996f34a743p@chr22:46041912..46041915, +
5.42e-195FFCP PHASE1:Hg19::chr8:75251775..75251785,+#_63648a6e12540d71440d0b996f34a743p@chr8:75251775..75251785, +
5.42e-195FFCP PHASE2:Hg19::chr7:117926347..117926353,-#_63648a6e12540d71440d0b996f34a743p@chr7:117926347..117926353, -
5.42e-195FFCP PHASE1:Hg19::chr6:128263833..128263838,-#_63648a6e12540d71440d0b996f34a743p@chr6:128263833..128263838, -
5.42e-195FFCP PHASE2:Hg19::chr9:116857558..116857566,-#_63648a6e12540d71440d0b996f34a743p@chr9:116857558..116857566, -
5.42e-195FFCP PHASE2:Hg19::chr15:69972162..69972169,+#_63648a6e12540d71440d0b996f34a743p@chr15:69972162..69972169, +
5.42e-195FFCP PHASE2:Hg19::chr4:134707474..134707504,-#_63648a6e12540d71440d0b996f34a743p@chr4:134707474..134707504, -
5.42e-195FFCP PHASE1:Hg19::chr3:192598433..192598481,-#_63648a6e12540d71440d0b996f34a743p@chr3:192598433..192598481, -
5.42e-195FFCP PHASE1:Hg19::chr15:92006659..92006679,+#_63648a6e12540d71440d0b996f34a743p2@uc002bqw.2
5.42e-195FFCP PHASE2:Hg19::chr9:72117884..72117889,-#_63648a6e12540d71440d0b996f34a743p@chr9:72117884..72117889, -
5.42e-195FFCP PHASE1:Hg19::chr4:134707420..134707442,-#_63648a6e12540d71440d0b996f34a743p@chr4:134707420..134707442, -
5.42e-195FFCP PHASE2:Hg19::chr4:105805755..105805761,+#_63648a6e12540d71440d0b996f34a743p@chr4:105805755..105805761, +
5.42e-195FFCP PHASE2:Hg19::chr8:114877856..114877881,-#_63648a6e12540d71440d0b996f34a743p@chr8:114877856..114877881, -
5.42e-195FFCP PHASE2:Hg19::chr8:16739475..16739490,-#_63648a6e12540d71440d0b996f34a743p@chr8:16739475..16739490, -
5.42e-195FFCP PHASE1:Hg19::chr4:133657589..133657598,-#_63648a6e12540d71440d0b996f34a743p@chr4:133657589..133657598, -
5.42e-195FFCP PHASE2:Hg19::chr15:91989101..91989105,+#_63648a6e12540d71440d0b996f34a743p@chr15:91989101..91989105, +
5.42e-195FFCP PHASE2:Hg19::chr4:175842537..175842553,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842537..175842553, -
5.42e-195FFCP PHASE2:Hg19::chr9:87797549..87797564,+#_63648a6e12540d71440d0b996f34a743p@chr9:87797549..87797564, +
5.42e-195FFCP PHASE2:Hg19::chr16:67022522..67022529,+#_63648a6e12540d71440d0b996f34a743p12@CES4A
5.42e-195FFCP PHASE1:Hg19::chr8:67519931..67519935,-#_63648a6e12540d71440d0b996f34a743p@chr8:67519931..67519935, -
5.42e-195FFCP PHASE1:Hg19::chr7:19479837..19479844,+#_63648a6e12540d71440d0b996f34a743p@chr7:19479837..19479844, +
5.42e-195FFCP PHASE1:Hg19::chr2:162762231..162762234,+#_63648a6e12540d71440d0b996f34a743p@chr2:162762231..162762234, +
5.42e-195FFCP PHASE2:Hg19::chr13:49078833..49078841,-#_63648a6e12540d71440d0b996f34a743p@chr13:49078833..49078841, -
5.42e-195FFCP PHASE1:Hg19::chr17:14101134..14101143,+#_63648a6e12540d71440d0b996f34a743p@chr17:14101134..14101143, +
5.42e-195FFCP PHASE2:Hg19::chr1:237900222..237900230,+#_63648a6e12540d71440d0b996f34a743p@chr1:237900222..237900230, +
5.42e-195FFCP PHASE2:Hg19::chr8:51970952..51970959,+#_63648a6e12540d71440d0b996f34a743p@chr8:51970952..51970959, +
5.42e-195FFCP PHASE1:Hg19::chr4:175842470..175842486,-#_63648a6e12540d71440d0b996f34a743p@chr4:175842470..175842486, -
5.42e-195FFCP PHASE1:Hg19::chr4:2428062..2428080,+#_63648a6e12540d71440d0b996f34a743p1@uc003gfa.1
5.42e-195FFCP PHASE1:Hg19::chr2:141989111..141989114,-#_63648a6e12540d71440d0b996f34a743p@chr2:141989111..141989114, -
5.42e-195FFCP PHASE2:Hg19::chr3:152204326..152204345,+#_63648a6e12540d71440d0b996f34a743p@chr3:152204326..152204345, +
5.42e-195FFCP PHASE1:Hg19::chr16:67022368..67022374,-#_63648a6e12540d71440d0b996f34a743p@chr16:67022368..67022374, -
5.42e-195FFCP PHASE1:Hg19::chr4:111448516..111448521,+#_63648a6e12540d71440d0b996f34a743p@chr4:111448516..111448521, +

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