UBERON:0007284: Difference between revisions
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|xref=EFO:0003424;;ZFA:0000063 | |xref=EFO:0003424;;TAO:0000063;;ZFA:0000063 | ||
|is_a=UBERON:0006598 | |is_a=UBERON:0006598 | ||
|synonym= | |synonym= | ||
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|obo_creation_date= | |obo_creation_date= | ||
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|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 17:07, 26 June 2012
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0006598(presumptive structure) |
|---|
Children
| develops from: | UBERON:0003075 (neural plate) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007284 (presumptive neural plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 9.11e-109 | FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5c | p3@CTNND2 |
| 9.11e-109 | FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5c | p3@CTNND2 |
| 3.26e-108 | FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7 | p3@PAX6 |
| 3.26e-108 | FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7 | p3@PAX6 |
| 7.37e-104 | FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66 | p1@ANKFN1 |
| 7.37e-104 | FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66 | p1@ANKFN1 |
| 2.38e-100 | FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987ed | p1@ENST00000412957 |
| 2.38e-100 | FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987ed | p1@ENST00000412957 |
| 3.23e-100 | FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864d | p@chr5:87439352..87439386, - |
| 3.23e-100 | FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864d | p@chr5:87439352..87439386, - |
| 1.2e-98 | FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33 | p2@RFX4 |
| 1.2e-98 | FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33 | p2@RFX4 |
| 1.54e-98 | FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4 | p8@CTNND2 |
| 1.54e-98 | FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4 | p8@CTNND2 |
| 2.06e-98 | FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406 | p3@NRXN1 |
| 2.06e-98 | FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406 | p3@NRXN1 |
| 4.02e-98 | FFCP PHASE1:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336e | p2@PSD3 |
| 4.02e-98 | FFCP PHASE2:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336e | p2@PSD3 |
| 4.6e-98 | FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08 | p7@DTNA |
| 4.6e-98 | FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08 | p7@DTNA |
| 9.29e-98 | FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1 | p6@BSCL2 |
| 9.29e-98 | FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1 | p6@BSCL2 |
| 2.26e-97 | FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0 | p@chr5:146314142..146314146, - |
| 2.26e-97 | FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0 | p@chr5:146314142..146314146, - |
| 1.06e-96 | FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52 | p2@MARCH1 |
| 1.06e-96 | FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52 | p2@MARCH1 |
| 1.15e-96 | FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3 | p2@SRCIN1 |
| 1.15e-96 | FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3 | p2@SRCIN1 |
| 1.21e-96 | FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576 | p1@GABRG1 |
| 1.21e-96 | FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576 | p1@GABRG1 |
| 2.85e-96 | FFCP PHASE2:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6 | p@chr19:30016395..30016433, + |
| 2.85e-96 | FFCP PHASE1:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6 | p@chr19:30016395..30016433, + |
| 4.51e-96 | FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985dec | p2@CTNND2 |
| 4.51e-96 | FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985dec | p2@CTNND2 |
| 7.48e-96 | FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3c | p4@RFX4 |
| 7.48e-96 | FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3c | p4@RFX4 |
| 7.68e-96 | FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6 | p9@PRKACB |
| 7.68e-96 | FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6 | p9@PRKACB |
| 8.2e-96 | FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871 | p@chr15:46702499..46702523, + |
| 8.2e-96 | FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871 | p@chr15:46702499..46702523, + |
| 8.26e-96 | FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fd | p4@LINC00461 |
| 8.26e-96 | FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fd | p4@LINC00461 |
| 9.79e-96 | FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2 | p6@GPM6B |
| 9.79e-96 | FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2 | p6@GPM6B |
| 1.45e-95 | FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87 | p17@PRKACB |
| 1.45e-95 | FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87 | p17@PRKACB |
| 1.98e-95 | FFCP PHASE2:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464b | p@chr16:4850844..4850888, - |
| 1.98e-95 | FFCP PHASE1:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464b | p@chr16:4850844..4850888, - |
| 2.2e-95 | FFCP PHASE1:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6 | p4@MAP7 |
| 2.2e-95 | FFCP PHASE2:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6 | p4@MAP7 |
| 3.63e-95 | FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0 | p17@NTRK2 |
| 3.63e-95 | FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0 | p17@NTRK2 |
| 3.98e-95 | FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263a | p8@PRKCZ |
| 3.98e-95 | FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263a | p8@PRKCZ |
| 4.64e-95 | FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9f | p1@RFX4 |
| 4.64e-95 | FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9f | p1@RFX4 |
| 6.45e-95 | FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7a | p@chr6:80131670..80131724, + |
| 6.45e-95 | FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7a | p@chr6:80131670..80131724, + |
| 1.07e-94 | FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10ea | p1@ATP10B |
| 1.07e-94 | FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10ea | p1@ATP10B |
| 1.15e-94 | FFCP PHASE2:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0 | p2@CNTNAP4 |
| 1.15e-94 | FFCP PHASE1:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0 | p2@CNTNAP4 |
| 1.24e-94 | FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3a | p2@GABRG1 |
| 1.24e-94 | FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3a | p2@GABRG1 |
| 3.41e-94 | FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828 | p@chr7:47420733..47420758, - |
| 3.41e-94 | FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828 | p@chr7:47420733..47420758, - |
| 3.86e-94 | FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747 | p9@GPM6B |
| 3.86e-94 | FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747 | p9@GPM6B |
| 4.07e-94 | FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456 | p4@APC |
| 4.07e-94 | FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456 | p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343 |
| 4.07e-94 | FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456 | p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343 |
| 4.07e-94 | FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456 | p4@APC |
| 1.32e-93 | FFCP PHASE2:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8b | p10@DTNA |
| 1.32e-93 | FFCP PHASE1:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8b | p10@DTNA |
| 1.41e-93 | FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235 | p2@KCNJ16 |
| 1.41e-93 | FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235 | p2@KCNJ16 |
| 1.62e-93 | FFCP PHASE2:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27 | p7@GFAP |
| 1.62e-93 | FFCP PHASE1:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27 | p7@GFAP |
| 1.62e-93 | FFCP PHASE1:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27 | p5@DTNA |
| 1.62e-93 | FFCP PHASE2:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27 | p5@DTNA |
| 3.0e-93 | FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4b | p8@DST |
| 3.0e-93 | FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4b | p8@DST |
| 4.29e-93 | FFCP PHASE1:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9 | p@chr17:7558857..7558903, + |
| 4.29e-93 | FFCP PHASE2:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9 | p@chr17:7558857..7558903, + |
| 4.3e-93 | FFCP PHASE1:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7d | p15@CTNND2 |
| 4.3e-93 | FFCP PHASE2:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7d | p15@CTNND2 |
| 4.84e-93 | FFCP PHASE1:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7e | p1@ENST00000450270 |
| 4.84e-93 | FFCP PHASE2:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7e | p1@ENST00000450270 |
| 5.06e-93 | FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3 | p2@PAQR6 |
| 5.06e-93 | FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3 | p2@PAQR6 |
| 5.69e-93 | FFCP PHASE1:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992f | p12@TJP1 |
| 5.69e-93 | FFCP PHASE2:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992f | p12@TJP1 |
| 6.08e-93 | FFCP PHASE2:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549b | p9@CHN2 |
| 6.08e-93 | FFCP PHASE1:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549b | p9@CHN2 |
| 6.68e-93 | FFCP PHASE1:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09 | p3@SFXN5 |
| 6.68e-93 | FFCP PHASE2:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09 | p3@SFXN5 |
| 1.1e-92 | FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39b | p2@uc002fch.1 |
| 1.1e-92 | FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39b | p2@uc002fch.1 |
| 2.68e-92 | FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695d | p1@ANK3 |
| 2.68e-92 | FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695d | p1@ANK3 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
