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UBERON:0003075

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Name:neural plate
Namespace:FANTOM
Definition:"A region of embryonic ectodermal cells that lie directly above the notochord. During neurulation, they change shape and produce an infolding of the neural plate (the neural fold) that then seals to form the neural tube[XAO]. The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium[ZFA]" [ISBN:0815318960, OMD:neural+plate, Wikipedia:Neural_plate, ZFIN:curator]
Xrefs:
links:

AAO:0011072
BTO:0001765
EHDAA:346
EHDAA:902
EMAPA:16095
EMAPA:16527
EMAPA:16756
[ Neural_Crest.png Neural_Crest.png]
ncithesaurus:Neural_Plate
RETIRED_EHDAA2:0001252
TAO:0000132
VHOG:0000068
XAO:0000249

ZFA:0000132
Synonyms: "lamina neuralis" RELATED LATIN [Wikipedia:Neural_plate]
"presumptive central nervous system" RELATED []
Alt_id: UBERON:XAO_0000249-ZFA_0000132
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0005291(embryonic tissue),UBERON:0007497(developing epithelial placode),UBERON:0010371(ecto-epithelium),UBERON:0016879(future central nervous system)
develops_from:UBERON:0002346(neurectoderm),UBERON:0007284(presumptive neural plate)
part_of:UBERON:0000922(embryo),UBERON:0002346(neurectoderm)



Children

develops from:UBERON:0002342 (neural crest),UBERON:0007135 (neural keel)
part of:UBERON:0003056 (pre-chordal neural plate),UBERON:0003057 (chordal neural plate),UBERON:0005061 (neural groove)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003075 (neural plate), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data











Property "Property value" (as page type) with input value "UBPROP:0000001 "The earliest recognizable dorsal ectodermal primordium of the central nervous system present near the end of gastrulation before infolding to form the neural keel; consists of a thickened pseudostratified epithelium. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.