UBERON:0000167: Difference between revisions
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;; | |xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA2:0001324;;EHDAA:6970;;EMAPA:17411;;EV:0100057;;FMA:20292;;HAO:0000669;;ncithesaurus:Oral_Cavity;;SCTID:181220002;;TAO:0001027;;TGMA:0000102;;VHOG:0000188;;WBbt:0005255;;XAO:0000126;;ZFA:0001027 | ||
|is_a=UBERON:0002553 | |is_a=UBERON:0002553 | ||
|synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | |synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | ||
| Line 14: | Line 14: | ||
|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim;;vertebrate_core | |subset=uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
| Line 20: | Line 19: | ||
|located_in= | |located_in= | ||
|part_of=UBERON:0000165 | |part_of=UBERON:0000165 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Latest revision as of 13:25, 27 June 2012
| Name: | oral cavity | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"buccal cavity" EXACT [FMA:20292] "cavity of mouth" EXACT [] | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002553(anatomical cavity) |
|---|---|
| part_of: | UBERON:0000165(mouth) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000167 (oral cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70859008..70859019,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859008..70859019, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009400..9009412,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009400..9009412, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11037049..11037056,-#_d0c61eebbf6b0409239e45fca343f024 | p5@PRH1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chrX:129565220..129565223,+#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:129565220..129565223, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:99243504..99243506,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:99243504..99243506, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31761883..31761894,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761883..31761894, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chrX:53171146..53171174,-#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:53171146..53171174, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr10:12466842..12466843,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr10:12466842..12466843, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71029698..71029719,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71029698..71029719, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31763318..31763328,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763318..31763328, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:66624238..66624249,+#_d0c61eebbf6b0409239e45fca343f024 | p1@AL117652 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11033611..11033616,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033611..11033616, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:25004699..25004706,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:25004699..25004706, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:52450586..52450589,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr5:52450586..52450589, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70868036..70868047,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868036..70868047, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr7:109641728..109641729,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr7:109641728..109641729, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31756995..31757006,+#_d0c61eebbf6b0409239e45fca343f024 | p5@BPIFA2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:55224312..55224339,+#_d0c61eebbf6b0409239e45fca343f024 | p6@MUCL1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70924295..70924307,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924295..70924307, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71024386..71024397,+#_d0c61eebbf6b0409239e45fca343f024 | p8@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71029698..71029719,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71029698..71029719, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11037034..11037039,-#_d0c61eebbf6b0409239e45fca343f024 | p4@PRH1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009400..9009412,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009400..9009412, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chrX:129565220..129565223,+#_d0c61eebbf6b0409239e45fca343f024 | p@chrX:129565220..129565223, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31761883..31761894,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761883..31761894, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31768317..31768326,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31768317..31768326, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11033561..11033572,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033561..11033572, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70859008..70859019,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859008..70859019, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr15:91304387..91304431,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr15:91304387..91304431, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:55224189..55224198,+#_d0c61eebbf6b0409239e45fca343f024 | p9@MUCL1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11083291..11083303,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11083291..11083303, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:25004699..25004706,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:25004699..25004706, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:52450586..52450589,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr5:52450586..52450589, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70868036..70868047,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868036..70868047, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70916611..70916657,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70916611..70916657, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:17925808..17925814,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr11:17925808..17925814, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr7:109641728..109641729,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr7:109641728..109641729, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31756995..31757006,+#_d0c61eebbf6b0409239e45fca343f024 | p5@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31763234..31763252,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763234..31763252, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr13:21383303..21383305,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr13:21383303..21383305, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71024386..71024397,+#_d0c61eebbf6b0409239e45fca343f024 | p8@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31768317..31768326,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31768317..31768326, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255868..71255873,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255868..71255873, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:23858235..23858249,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:23858235..23858249, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009335..9009343,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009335..9009343, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70896475..70896477,+#_d0c61eebbf6b0409239e45fca343f024 | p2@HTN3 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:49942109..49942118,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942109..49942118, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31760791..31760799,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760791..31760799, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71028882..71028890,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028882..71028890, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr5:36237795..36237799,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr5:36237795..36237799, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31755975..31755986,+#_d0c61eebbf6b0409239e45fca343f024 | p2@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr16:83959468..83959471,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr16:83959468..83959471, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70916611..70916657,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70916611..70916657, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:41448820..41448825,+#_d0c61eebbf6b0409239e45fca343f024 | p13@CTPS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31763234..31763252,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31763234..31763252, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028882..71028890,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028882..71028890, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71232526..71232531,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71232526..71232531, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:66624280..66624292,+#_d0c61eebbf6b0409239e45fca343f024 | p3@AL117652 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:21489085..21489115,-#_d0c61eebbf6b0409239e45fca343f024 | p62@NDRG2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:21516851..21516857,-#_d0c61eebbf6b0409239e45fca343f024 | p63@NDRG2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11035682..11035705,-#_d0c61eebbf6b0409239e45fca343f024 | p4@PRR4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255868..71255873,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255868..71255873, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:23858235..23858249,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:23858235..23858249, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009335..9009343,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009335..9009343, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9022642..9022656,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9022642..9022656, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70896475..70896477,+#_d0c61eebbf6b0409239e45fca343f024 | p2@HTN3 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70924317..70924327,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924317..70924327, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:49942089..49942094,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942089..49942094, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:69012249..69012259,+#_d0c61eebbf6b0409239e45fca343f024 | p19@RAD51B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760791..31760799,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760791..31760799, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009415..9009422,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009415..9009422, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:36237795..36237799,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr5:36237795..36237799, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70902060..70902081,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902060..70902081, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31755975..31755986,+#_d0c61eebbf6b0409239e45fca343f024 | p2@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31761911..31761920,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761911..31761920, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:83959468..83959471,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr16:83959468..83959471, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:41448820..41448825,+#_d0c61eebbf6b0409239e45fca343f024 | p13@CTPS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71232526..71232531,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71232526..71232531, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:66624280..66624292,+#_d0c61eebbf6b0409239e45fca343f024 | p3@AL117652 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70868063..70868067,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868063..70868067, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9022642..9022656,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9022642..9022656, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70924317..70924327,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924317..70924327, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71028409..71028415,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028409..71028415, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255460..71255465,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255460..71255465, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11037049..11037056,-#_d0c61eebbf6b0409239e45fca343f024 | p5@PRH1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70866646..70866651,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70866646..70866651, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:12113249..12113261,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr3:12113249..12113261, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:82795636..82795655,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:82795636..82795655, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009415..9009422,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009415..9009422, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70902060..70902081,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902060..70902081, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71020030..71020038,+#_d0c61eebbf6b0409239e45fca343f024 | p7@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31761911..31761920,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761911..31761920, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11033611..11033616,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033611..11033616, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70859246..70859275,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859246..70859275, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9017236..9017243,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9017236..9017243, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:55224312..55224339,+#_d0c61eebbf6b0409239e45fca343f024 | p6@MUCL1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70868063..70868067,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868063..70868067, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70918781..70918818,+#_d0c61eebbf6b0409239e45fca343f024 | p3@HTN1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028409..71028415,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028409..71028415, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255460..71255465,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255460..71255465, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
