UBERON:0000167: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0000167
|name=oral cavity
|namespace=
|def=
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA:6970;;EHDAA2:0001324;;EMAPA:17411;;EV:0100057;;FMA:2029...") |
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|namespace= | |namespace= | ||
|def= | |def= | ||
|xref=AAO:0000053;;AAO:0000960;;EFO:0001975;; | |xref=AAO:0000053;;AAO:0000960;;EFO:0001975;;EHDAA2:0001324;;EHDAA:6970;;EMAPA:17411;;EV:0100057;;FMA:20292;;HAO:0000669;;ncithesaurus:Oral_Cavity;;SCTID:181220002;;TAO:0001027;;TGMA:0000102;;VHOG:0000188;;WBbt:0005255;;XAO:0000126;;ZFA:0001027 | ||
|is_a=UBERON:0002553 | |is_a=UBERON:0002553 | ||
|synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | |synonym="buccal cavity" EXACT [FMA:20292];;"cavity of mouth" EXACT [] | ||
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|obo_creation_date= | |obo_creation_date= | ||
|subset=uberon_slim;;vertebrate_core | |subset=uberon_slim;;vertebrate_core | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
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|located_in= | |located_in= | ||
|part_of=UBERON:0000165 | |part_of=UBERON:0000165 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl;;UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Latest revision as of 13:25, 27 June 2012
| Name: | oral cavity | ||
|---|---|---|---|
| Xrefs: |
| ||
| Synonyms: |
"buccal cavity" EXACT [FMA:20292] "cavity of mouth" EXACT [] | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0002553(anatomical cavity) |
|---|---|
| part_of: | UBERON:0000165(mouth) |
Children
NA
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Mouse (Mus musculus)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 11771-123I7 (salivary acinar cells, donor1)
- 11772-123I8 (salivary acinar cells, donor2)
- 11773-123I9 (salivary acinar cells, donor3)
- 59-29C1 (submandibular gland, adult)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000167 (oral cavity), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028882..71028890,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028882..71028890, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71232526..71232531,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71232526..71232531, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr17:66624280..66624292,+#_d0c61eebbf6b0409239e45fca343f024 | p3@AL117652 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:21489085..21489115,-#_d0c61eebbf6b0409239e45fca343f024 | p62@NDRG2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:21516851..21516857,-#_d0c61eebbf6b0409239e45fca343f024 | p63@NDRG2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11035682..11035705,-#_d0c61eebbf6b0409239e45fca343f024 | p4@PRR4 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255868..71255873,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255868..71255873, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:23858235..23858249,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:23858235..23858249, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009335..9009343,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009335..9009343, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9022642..9022656,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9022642..9022656, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70896475..70896477,+#_d0c61eebbf6b0409239e45fca343f024 | p2@HTN3 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70924317..70924327,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924317..70924327, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:49942089..49942094,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942089..49942094, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:69012249..69012259,+#_d0c61eebbf6b0409239e45fca343f024 | p19@RAD51B |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760791..31760799,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760791..31760799, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009415..9009422,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009415..9009422, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr5:36237795..36237799,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr5:36237795..36237799, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70902060..70902081,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902060..70902081, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31755975..31755986,+#_d0c61eebbf6b0409239e45fca343f024 | p2@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31761911..31761920,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761911..31761920, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr16:83959468..83959471,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr16:83959468..83959471, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:41448820..41448825,+#_d0c61eebbf6b0409239e45fca343f024 | p13@CTPS |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71232526..71232531,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71232526..71232531, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr17:66624280..66624292,+#_d0c61eebbf6b0409239e45fca343f024 | p3@AL117652 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70868063..70868067,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868063..70868067, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9022642..9022656,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9022642..9022656, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70924317..70924327,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924317..70924327, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71028409..71028415,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028409..71028415, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255460..71255465,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255460..71255465, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11037049..11037056,-#_d0c61eebbf6b0409239e45fca343f024 | p5@PRH1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70866646..70866651,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70866646..70866651, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr3:12113249..12113261,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr3:12113249..12113261, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:82795636..82795655,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:82795636..82795655, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009415..9009422,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009415..9009422, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70902060..70902081,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902060..70902081, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71020030..71020038,+#_d0c61eebbf6b0409239e45fca343f024 | p7@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31761911..31761920,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761911..31761920, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71028409..71028415,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71028409..71028415, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11033611..11033616,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033611..11033616, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70859246..70859275,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859246..70859275, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9017236..9017243,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9017236..9017243, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:55224312..55224339,+#_d0c61eebbf6b0409239e45fca343f024 | p6@MUCL1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70868063..70868067,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70868063..70868067, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70918781..70918818,+#_d0c61eebbf6b0409239e45fca343f024 | p3@HTN1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255460..71255465,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255460..71255465, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255891..71255902,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255891..71255902, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:23860113..23860123,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:23860113..23860123, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:9009350..9009358,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009350..9009358, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11036998..11037006,-#_d0c61eebbf6b0409239e45fca343f024 | p6@PRH1 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70866646..70866651,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70866646..70866651, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70898882..70898894,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70898882..70898894, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr14:49942143..49942148,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942143..49942148, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr6:82795636..82795655,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:82795636..82795655, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31760813..31760814,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760813..31760814, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr11:30756513..30756541,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr11:30756513..30756541, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71020030..71020038,+#_d0c61eebbf6b0409239e45fca343f024 | p7@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr13:21383303..21383305,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr13:21383303..21383305, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr11:30756513..30756541,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr11:30756513..30756541, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr3:12113249..12113261,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr3:12113249..12113261, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:11083291..11083303,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11083291..11083303, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70859246..70859275,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70859246..70859275, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70867977..70867982,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70867977..70867982, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9017236..9017243,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9017236..9017243, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr15:91304387..91304431,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr15:91304387..91304431, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70918781..70918818,+#_d0c61eebbf6b0409239e45fca343f024 | p3@HTN1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71024179..71024185,+#_d0c61eebbf6b0409239e45fca343f024 | p9@C4orf40 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:65506801..65506806,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:65506801..65506806, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71255891..71255902,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255891..71255902, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:23860113..23860123,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:23860113..23860123, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:9009350..9009358,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:9009350..9009358, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr15:95746149..95746154,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr15:95746149..95746154, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70898882..70898894,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70898882..70898894, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70924328..70924336,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924328..70924336, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:49942109..49942118,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr14:49942109..49942118, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31760813..31760814,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31760813..31760814, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31765977..31765983,+#_d0c61eebbf6b0409239e45fca343f024 | p13@BPIFA2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70867977..70867982,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70867977..70867982, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:70902243..70902249,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902243..70902249, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:146782922..146782938,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:146782922..146782938, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr1:27652420..27652431,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:27652420..27652431, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31761938..31761953,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr20:31761938..31761953, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:71024179..71024185,+#_d0c61eebbf6b0409239e45fca343f024 | p9@C4orf40 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr20:31765977..31765983,+#_d0c61eebbf6b0409239e45fca343f024 | p13@BPIFA2 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr4:71255777..71255788,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:71255777..71255788, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr1:65506801..65506806,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr1:65506801..65506806, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:21516851..21516857,-#_d0c61eebbf6b0409239e45fca343f024 | p63@NDRG2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:11033624..11033630,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:11033624..11033630, + |
| 1.83e-98 | FFCP PHASE2:Hg19::chr10:12466842..12466843,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr10:12466842..12466843, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31757056..31757062,+#_d0c61eebbf6b0409239e45fca343f024 | p9@BPIFA2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr12:55224381..55224392,+#_d0c61eebbf6b0409239e45fca343f024 | p7@MUCL1 |
| 1.83e-98 | FFCP PHASE1:Hg19::chr12:68527632..68527634,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr12:68527632..68527634, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr9:129377669..129377671,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr9:129377669..129377671, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70924328..70924336,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70924328..70924336, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr18:4264585..4264594,+#_d0c61eebbf6b0409239e45fca343f024 | p4@LOC284215 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr14:69012249..69012259,+#_d0c61eebbf6b0409239e45fca343f024 | p19@RAD51B |
| 1.83e-98 | FFCP PHASE1:Hg19::chr8:32168322..32168325,+#_d0c61eebbf6b0409239e45fca343f024 | p@chr8:32168322..32168325, + |
| 1.83e-98 | FFCP PHASE1:Hg19::chr6:82882487..82882510,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr6:82882487..82882510, - |
| 1.83e-98 | FFCP PHASE1:Hg19::chr20:31749574..31749588,+#_d0c61eebbf6b0409239e45fca343f024 | p3@BPIFA2 |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:70902243..70902249,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:70902243..70902249, - |
| 1.83e-98 | FFCP PHASE2:Hg19::chr4:146782922..146782938,-#_d0c61eebbf6b0409239e45fca343f024 | p@chr4:146782922..146782938, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical cavity bounded anteriorly by the mouth and posteriorly by the derivatives of the branchial arches.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
