UBERON:0004089: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 18: | Line 18: | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0001456 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:35, 27 June 2012
| Name: | midface | ||
|---|---|---|---|
| Definition: | "the middle of the face including the nose and its associated bony structures[MW]." [HP:0000309, http://www.merriam-webster.com/medical/midface] | ||
| Xrefs: |
| ||
| Synonyms: |
"lower face" RELATED [] "midface/lower face" RELATED [] "snout" RELATED SENSU [MA:0001910] | ||
| Comments: | editors note: this class is currently a union of the snout (e.g. in mouse), the midface and the lower face. Note that in MA, snout includes the whole jaw and should thus be more alike the lower face than the midface, so its placement here is not strictly accurate. In future we might introduce specific classes for each of these, and include the full parthood relationships. if this is done, then care should be taken to preserve inferences such as an abnormality of the lower face being an abnormality of the midface. |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000061(anatomical structure) |
|---|---|
| part_of: | UBERON:0001456(face) |
Children
| part of: | UBERON:0000004 (olfactory apparatus),UBERON:0001567 (cheek),UBERON:0001709 (upper jaw region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10199-103F1 (parotid gland, adult)
- 10275-104E5
- 10303-104H6
- 10331-105B7
- 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004089 (midface), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506400..11506433,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506400..11506433, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr2:64121005..64121007,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr2:64121005..64121007, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506400..11506433,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506400..11506433, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546872..11546887,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546872..11546887, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11418847..11418863,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11418847..11418863, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546872..11546887,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546872..11546887, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:73249728..73249729,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr1:73249728..73249729, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461203..11461212,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461203..11461212, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr20:38579074..38579083,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr20:38579074..38579083, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11463302..11463306,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p3@PRB4 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546098..11546121,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546098..11546121, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:27652675..27652684,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr1:27652675..27652684, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546098..11546121,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546098..11546121, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr1:104159538..104159544,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p1@AMY2A |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11460065..11460082,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11460065..11460082, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11463302..11463306,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p3@PRB4 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:131707604..131707608,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr5:131707604..131707608, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr17:68473195..68473200,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr17:68473195..68473200, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461556..11461561,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461556..11461561, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506903..11506911,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506903..11506911, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11418889..11418902,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11418889..11418902, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr5:159266819..159266827,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr5:159266819..159266827, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr4:156244563..156244567,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr4:156244563..156244567, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506903..11506911,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506903..11506911, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461215..11461224,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461215..11461224, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461556..11461561,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461556..11461561, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:193523505..193523508,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:193523505..193523508, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461288..11461303,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461288..11461303, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506657..11506679,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506657..11506679, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506657..11506679,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506657..11506679, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:84940118..84940122,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr7:84940118..84940122, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11504757..11504776,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11504757..11504776, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr4:156244563..156244567,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr4:156244563..156244567, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11504757..11504776,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11504757..11504776, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:141482175..141482178,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:141482175..141482178, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546512..11546529,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p2@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11085174..11085180,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11085174..11085180, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546512..11546529,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p2@PRB2 |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:55350938..55350945,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:55350938..55350945, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:159266819..159266827,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr5:159266819..159266827, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:89001385..89001386,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr6:89001385..89001386, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461834..11461842,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461834..11461842, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr9:3971778..3971783,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr9:3971778..3971783, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461834..11461842,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461834..11461842, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506768..11506777,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506768..11506777, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506768..11506777,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506768..11506777, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461145..11461156,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461145..11461156, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chrX:32229061..32229062,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chrX:32229061..32229062, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr2:64121005..64121007,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr2:64121005..64121007, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506471..11506494,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506471..11506494, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506471..11506494,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506471..11506494, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546877..11546885,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p4@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11418889..11418902,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11418889..11418902, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546877..11546885,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p4@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461215..11461224,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461215..11461224, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:46982400..46982405,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:46982400..46982405, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546139..11546158,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p3@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546139..11546158,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p3@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr6:143061489..143061496,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr6:143061489..143061496, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr20:38579074..38579083,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr20:38579074..38579083, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461567..11461574,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461567..11461574, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506917..11506930,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506917..11506930, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506917..11506930,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506917..11506930, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr3:193523505..193523508,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:193523505..193523508, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461234..11461250,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461234..11461250, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr5:131707604..131707608,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr5:131707604..131707608, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr17:68473195..68473200,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr17:68473195..68473200, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461567..11461574,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461567..11461574, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506721..11506729,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506721..11506729, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr3:60043839..60043846,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr3:60043839..60043846, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506721..11506729,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506721..11506729, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr7:84940118..84940122,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr7:84940118..84940122, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:143061489..143061496,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr6:143061489..143061496, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506208..11506238,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506208..11506238, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr7:133817277..133817278,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr7:133817277..133817278, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506208..11506238,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506208..11506238, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546581..11546615,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546581..11546615, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546581..11546615,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11546581..11546615, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461145..11461156,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461145..11461156, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr11:111114722..111114730,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr11:111114722..111114730, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11462291..11462306,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11462291..11462306, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11544471..11544496,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11544471..11544496, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr11:111114722..111114730,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr11:111114722..111114730, + |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11544471..11544496,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11544471..11544496, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461323..11461331,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461323..11461331, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr6:89001385..89001386,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr6:89001385..89001386, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11462291..11462306,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11462291..11462306, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr10:55624430..55624435,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr10:55624430..55624435, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461445..11461450,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461445..11461450, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506782..11506785,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506782..11506785, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr10:55624430..55624435,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr10:55624430..55624435, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506782..11506785,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506782..11506785, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461169..11461178,+#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461169..11461178, + |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11461445..11461450,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461445..11461450, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11506532..11506559,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506532..11506559, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11506532..11506559,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11506532..11506559, - |
| 1.55e-98 | FFCP PHASE1:Hg19::chr12:11546891..11546902,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p8@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11546891..11546902,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p8@PRB2 |
| 1.55e-98 | FFCP PHASE2:Hg19::chr12:11461234..11461250,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr12:11461234..11461250, - |
| 1.55e-98 | FFCP PHASE2:Hg19::chr8:140213621..140213625,-#_df04e4fef314a9e91c86d5cd2b9475d3 | p@chr8:140213621..140213625, - |
