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|def="A bone that is part of a cranium." [UBERON:automatic]
|def="A bone that is part of a cranium." [UBERON:automatic]
|xref=SCTID:181792001
|xref=SCTID:181792001
|is_a=UBERON:0000032;;UBERON:0003457
|is_a=UBERON:0003457
|synonym="cranium bone" EXACT [UBERON:automatic]
|synonym="cranium bone" EXACT [UBERON:automatic]
|comment=
|comment=Note that here cranium = skull - mandible
|alt_id=
|alt_id=
|disjoint_from=
|disjoint_from=
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|obo_creation_date=
|obo_creation_date=
|subset=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
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|part_of=UBERON:0003128
|part_of=UBERON:0003128
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|preceded_by=
}}
}}

Latest revision as of 13:37, 27 June 2012

Name:cranial bone
Definition:"A bone that is part of a cranium." [UBERON:automatic]
Xrefs:
links:
SCTID:181792001
Synonyms: "cranium bone" EXACT [UBERON:automatic]
Comments:Note that here cranium = skull - mandible

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0003457(head bone)
part_of:UBERON:0003128(cranium)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004766 (cranial bone), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_393437a447275ec45333ee35d832e41dp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_393437a447275ec45333ee35d832e41dp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_393437a447275ec45333ee35d832e41dp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_393437a447275ec45333ee35d832e41dp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_393437a447275ec45333ee35d832e41dp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_393437a447275ec45333ee35d832e41dp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_393437a447275ec45333ee35d832e41dp3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_393437a447275ec45333ee35d832e41dp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_393437a447275ec45333ee35d832e41dp4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_393437a447275ec45333ee35d832e41dp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_393437a447275ec45333ee35d832e41dp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_393437a447275ec45333ee35d832e41dp7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_393437a447275ec45333ee35d832e41dp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_393437a447275ec45333ee35d832e41dp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_393437a447275ec45333ee35d832e41dp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_393437a447275ec45333ee35d832e41dp9@Otof
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_393437a447275ec45333ee35d832e41dp@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_393437a447275ec45333ee35d832e41dp@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_393437a447275ec45333ee35d832e41dp18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_393437a447275ec45333ee35d832e41dp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_393437a447275ec45333ee35d832e41dp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_393437a447275ec45333ee35d832e41dp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_393437a447275ec45333ee35d832e41dp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_393437a447275ec45333ee35d832e41dp6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_393437a447275ec45333ee35d832e41dp@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_393437a447275ec45333ee35d832e41dp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_393437a447275ec45333ee35d832e41dp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_393437a447275ec45333ee35d832e41dp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_393437a447275ec45333ee35d832e41dp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_393437a447275ec45333ee35d832e41dp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_393437a447275ec45333ee35d832e41dp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349418..107349423,-#_393437a447275ec45333ee35d832e41dp5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_393437a447275ec45333ee35d832e41dp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_393437a447275ec45333ee35d832e41dp2@9230102O04Rik
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_393437a447275ec45333ee35d832e41dp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_393437a447275ec45333ee35d832e41dp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_393437a447275ec45333ee35d832e41dp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_393437a447275ec45333ee35d832e41dp1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_393437a447275ec45333ee35d832e41dp@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_393437a447275ec45333ee35d832e41dp4@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_393437a447275ec45333ee35d832e41dp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_393437a447275ec45333ee35d832e41dp2@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_393437a447275ec45333ee35d832e41dp2@Otof
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_393437a447275ec45333ee35d832e41dp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_393437a447275ec45333ee35d832e41dp4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983095..13983100,+#_393437a447275ec45333ee35d832e41dp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr2:75320183..75320189,+#_393437a447275ec45333ee35d832e41dp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:93218694..93218705,+#_393437a447275ec45333ee35d832e41dp1@Espnl
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_393437a447275ec45333ee35d832e41dp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_393437a447275ec45333ee35d832e41dp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_393437a447275ec45333ee35d832e41dp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_393437a447275ec45333ee35d832e41dp@chr1:16651649..16651655, +
1.87e-86FFCP PHASE2:Mm9::chr10:107156949..107156956,-#_393437a447275ec45333ee35d832e41dp3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_393437a447275ec45333ee35d832e41dp@chr18:81314626..81314636, +
1.87e-86FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_393437a447275ec45333ee35d832e41dp@chr2:75320183..75320189, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_393437a447275ec45333ee35d832e41dp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_393437a447275ec45333ee35d832e41dp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_393437a447275ec45333ee35d832e41dp13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_393437a447275ec45333ee35d832e41dp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_393437a447275ec45333ee35d832e41dp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr15:65641779..65641790,+#_393437a447275ec45333ee35d832e41dp@chr15:65641779..65641790, +
1.87e-86FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_393437a447275ec45333ee35d832e41dp@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_393437a447275ec45333ee35d832e41dp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_393437a447275ec45333ee35d832e41dp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_393437a447275ec45333ee35d832e41dp1@Otol1
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_393437a447275ec45333ee35d832e41dp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_393437a447275ec45333ee35d832e41dp18@Trpm3
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_393437a447275ec45333ee35d832e41dp2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_393437a447275ec45333ee35d832e41dp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_393437a447275ec45333ee35d832e41dp1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr17:13983198..13983203,+#_393437a447275ec45333ee35d832e41dp@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr15:12848147..12848162,+#_393437a447275ec45333ee35d832e41dp@chr15:12848147..12848162, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_393437a447275ec45333ee35d832e41dp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459231..154459240,+#_393437a447275ec45333ee35d832e41dp@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011956..67011967,+#_393437a447275ec45333ee35d832e41dp1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_393437a447275ec45333ee35d832e41dp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86745686..86745727,-#_393437a447275ec45333ee35d832e41dp@chr6:86745686..86745727, -
1.87e-86FFCP PHASE1:Mm9::chr3:69811590..69811601,+#_393437a447275ec45333ee35d832e41dp1@Otol1
1.87e-86FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_393437a447275ec45333ee35d832e41dp12@B3galt5
1.87e-86FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_393437a447275ec45333ee35d832e41dp2@Otogl
1.87e-86FFCP PHASE1:Mm9::chr16:96494788..96494801,+#_393437a447275ec45333ee35d832e41dp12@B3galt5
1.87e-86FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_393437a447275ec45333ee35d832e41dp6@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_393437a447275ec45333ee35d832e41dp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_393437a447275ec45333ee35d832e41dp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr15:58022966..58022995,-#_393437a447275ec45333ee35d832e41dp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_393437a447275ec45333ee35d832e41dp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_393437a447275ec45333ee35d832e41dp3@Fanca
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_393437a447275ec45333ee35d832e41dp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_393437a447275ec45333ee35d832e41dp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_393437a447275ec45333ee35d832e41dp2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_393437a447275ec45333ee35d832e41dp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843847..172843880,-#_393437a447275ec45333ee35d832e41dp@chr1:172843847..172843880, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207397..42207408,-#_393437a447275ec45333ee35d832e41dp@chr9:42207397..42207408, -
1.87e-86FFCP PHASE1:Mm9::chr1:78523144..78523177,+#_393437a447275ec45333ee35d832e41dp@chr1:78523144..78523177, +
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_393437a447275ec45333ee35d832e41dp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_393437a447275ec45333ee35d832e41dp@chr4:133802857..133802884, +
1.87e-86FFCP PHASE1:Mm9::chr3:154459246..154459253,+#_393437a447275ec45333ee35d832e41dp@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322383..78322395,-#_393437a447275ec45333ee35d832e41dp2@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_393437a447275ec45333ee35d832e41dp@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr2:53464168..53464175,+#_393437a447275ec45333ee35d832e41dp@chr2:53464168..53464175, +

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