UBERON:0003128
From FANTOM5_SSTAR
Name: | cranium | ||
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Namespace: | FANTOM | ||
Definition: | "Upper portion of the skull that excludes the mandible (when present in the organism)." [Wikipedia:Cranium_(anatomy)] | ||
Xrefs: |
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Synonyms: |
"bones of cranium" EXACT [FMA:71325] "calvarium" RELATED [BTO:0001328] "epicranial plate" RELATED [] "ossa cranii" EXACT [FMA:71325, FMA:TA] "skeletal system of head" RELATED [] "skull minus mandible" EXACT [] "upper part of skull" EXACT [] | ||
Comments: | The term cranium can be ambiguous, in that it can refer to the neurocranium, or the neurocranium and the Facial skeleton[WP]. AO notes: the inclusion of the FMA class here is probably not quite correct, as this class includes as parts sutures, whereas this is not part of the bones of the cranium | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000075(subdivision of skeletal system) |
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part_of: | UBERON:0003129(skull) |
Children
part of: | UBERON:0001703 (neurocranium),UBERON:0004339 (calvarium),UBERON:0004766 (cranial bone) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003128 (cranium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr19:10536767..10536777,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr19:10536767..10536777, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:94180607..94180619, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:94371127..94371139, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349309..107349318,-#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr18:66033526..66033539,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr15:89215333..89215341,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:89215333..89215341, + |
1.87e-86 | FFCP PHASE2:Mm9::chr14:31283085..31283097,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:31283085..31283097, - |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_c07e35bfbcad3a9ca1580153639f40d6 | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_c07e35bfbcad3a9ca1580153639f40d6 | p11@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Espnl |
1.87e-86 | FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_c07e35bfbcad3a9ca1580153639f40d6 | p18@Trpm3 |
1.87e-86 | FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:81314626..81314636, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:75320183..75320189, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206695..121206711,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Jag1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c07e35bfbcad3a9ca1580153639f40d6 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Slc26a5 |
1.87e-86 | FFCP PHASE2:Mm9::chr16:96494788..96494801,+#_c07e35bfbcad3a9ca1580153639f40d6 | p12@B3galt5 |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c07e35bfbcad3a9ca1580153639f40d6 | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_c07e35bfbcad3a9ca1580153639f40d6 | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr16:45693840..45693856,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:65641741..65641748, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78257491..78257498,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:113251614..113251623, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE2:Mm9::chrX:154140781..154140788,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chrX:154140781..154140788, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tmc1 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983179..13983190, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349392..107349413,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Espnl |
1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:43699228..43699239,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:43699228..43699239, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42207397..42207408, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:89215333..89215341, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154459246..154459253, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Dytn |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr16:93971367..93971379, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_c07e35bfbcad3a9ca1580153639f40d6 | p9@Ankrd24 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otog |
1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:41495920..41495928, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_c07e35bfbcad3a9ca1580153639f40d6 | p7@Glt25d2 |
1.87e-86 | FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c07e35bfbcad3a9ca1580153639f40d6 | p9@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Gm1322 |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr10:80806020..80806031,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154459231..154459240, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:67371994..67372010,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr10:67371994..67372010, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:31585340..31585360,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710455..30710464,-#_c07e35bfbcad3a9ca1580153639f40d6 | p9@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_c07e35bfbcad3a9ca1580153639f40d6 | p18@Trpm3 |
1.87e-86 | FFCP PHASE2:Mm9::chr15:97806034..97806061,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:97806034..97806061, + |
1.87e-86 | FFCP PHASE2:Mm9::chr14:20649897..20649907,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:20649897..20649907, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:108316802..108316807,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr10:108316802..108316807, - |
1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Fanca |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Strc |
1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE2:Mm9::chr14:63099970..63099980,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:63099970..63099980, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Fanca |
1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:9811162..9811171,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@9230102O04Rik |
1.87e-86 | FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:43699188..43699216, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:35012397..35012405, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55255206..55255223,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tectb |
1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42206730..42206739, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:58626291..58626298, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:16651649..16651655,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:16651649..16651655, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:48087761..48087775, - |
1.87e-86 | FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Gipc3 |