UBERON:0003128
From FANTOM5_SSTAR
Name: | cranium | ||
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Namespace: | FANTOM | ||
Definition: | "Upper portion of the skull that excludes the mandible (when present in the organism)." [Wikipedia:Cranium_(anatomy)] | ||
Xrefs: |
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Synonyms: |
"bones of cranium" EXACT [FMA:71325] "calvarium" RELATED [BTO:0001328] "epicranial plate" RELATED [] "ossa cranii" EXACT [FMA:71325, FMA:TA] "skeletal system of head" RELATED [] "skull minus mandible" EXACT [] "upper part of skull" EXACT [] | ||
Comments: | The term cranium can be ambiguous, in that it can refer to the neurocranium, or the neurocranium and the Facial skeleton[WP]. AO notes: the inclusion of the FMA class here is probably not quite correct, as this class includes as parts sutures, whereas this is not part of the bones of the cranium | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000075(subdivision of skeletal system) |
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part_of: | UBERON:0003129(skull) |
Children
part of: | UBERON:0001703 (neurocranium),UBERON:0004339 (calvarium),UBERON:0004766 (cranial bone) |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Mouse (Mus musculus)
- 10195-103E6 (olfactory region, adult)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003128 (cranium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:58283583..58283607, - |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr16:93971357..93971363, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:35012425..35012439, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:31283085..31283097, - |
1.87e-86 | FFCP PHASE1:Mm9::chr18:81314626..81314636,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:81314626..81314636, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42207375..42207384, - |
1.87e-86 | FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:94371127..94371139, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_c07e35bfbcad3a9ca1580153639f40d6 | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:154208086..154208123,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr13:78257491..78257498, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Gpr152 |
1.87e-86 | FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr8:13414289..13414295, + |
1.87e-86 | FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Fscn2 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154459184..154459195, + |
1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chrX:154140800..154140810, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_c07e35bfbcad3a9ca1580153639f40d6 | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Slc26a5 |
1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:35012425..35012439, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Espnl |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:67011941..67011951,+#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Gm1322 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207397..42207408,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42207397..42207408, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:133802857..133802884,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:133802857..133802884, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:154693281..154693317, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tmprss3 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:139597684..139597691, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr10:67371994..67372010, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Plscr5 |
1.87e-86 | FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:63099970..63099980, - |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otog |
1.87e-86 | FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:76964459..76964469,+#_c07e35bfbcad3a9ca1580153639f40d6 | p15@Mctp1 |
1.87e-86 | FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:133957514..133957529, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_c07e35bfbcad3a9ca1580153639f40d6 | p4@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983198..13983203, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:182528388..182528403, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:41495920..41495928, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:72652660..72652667, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:86746562..86746579, - |
1.87e-86 | FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:73232344..73232356, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Kcna10 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr3:31585340..31585360, + |
1.87e-86 | FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr5:144115382..144115389, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Otogl |
1.87e-86 | FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr2:170417150..170417155, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_c07e35bfbcad3a9ca1580153639f40d6 | p9@Otof |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Kncn |
1.87e-86 | FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:66033526..66033539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr14:102297747..102297765, + |
1.87e-86 | FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr18:42158627..42158630, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207852..42207876,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_c07e35bfbcad3a9ca1580153639f40d6 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Tomt |
1.87e-86 | FFCP PHASE1:Mm9::chr8:125802236..125802251,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Fanca |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843796..172843799,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:172843796..172843799, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_c07e35bfbcad3a9ca1580153639f40d6 | p41@Cacnb2 |
1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:109905468..109905474, + |
1.87e-86 | FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr12:13508015..13508019, + |
1.87e-86 | FFCP PHASE2:Mm9::chr8:13435173..13435186,+#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Fam70b |
1.87e-86 | FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_c07e35bfbcad3a9ca1580153639f40d6 | p3@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Tmprss7 |
1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr7:141605556..141605563, - |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:113251614..113251623, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207998..42208009,-#_c07e35bfbcad3a9ca1580153639f40d6 | p6@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:27252925..27252939, + |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78322383..78322395,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@uc007rhb.1 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Otof |
1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_c07e35bfbcad3a9ca1580153639f40d6 | p10@Sec11a |
1.87e-86 | FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_c07e35bfbcad3a9ca1580153639f40d6 | p2@Plscr5 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr11:8405038..8405048, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:42206730..42206739, - |
1.87e-86 | FFCP PHASE1:Mm9::chr6:113251570..113251578,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr6:113251570..113251578, + |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_c07e35bfbcad3a9ca1580153639f40d6 | p@chr16:93971367..93971379, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811590..69811601,+#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otol1 |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_c07e35bfbcad3a9ca1580153639f40d6 | p1@Otogl |