UBERON:0004875: Difference between revisions
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0004876 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:38, 27 June 2012
| Name: | nephrogenic cord | ||
|---|---|---|---|
| Definition: | "a portion of the urogenital ridge which is the source of much of the urinary system[WP]." [Wikipedia:Nephrogenic_cord] | ||
| Xrefs: |
| ||
| Synonyms: | "chorda nephrogenica" RELATED LATIN [Wikipedia:Nephrogenic_cord] | ||
| Comments: | part_of or develops_from urogenital ridge? |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0004876(urogenital ridge) |
| part_of: | UBERON:0000922(embryo) |
Children
| part of: | UBERON:0005754 (rostral part of nephrogenic cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004875 (nephrogenic cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63665679..63665688,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Defb42 |
| 2.83e-65 | FFCP PHASE2:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE2:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 2.83e-65 | FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_3e74b05bcd4ae70139df9224d331bf42 | p4@Spink12 |
| 2.83e-65 | FFCP PHASE1:Mm9::chr10:127470655..127470664,+#_3e74b05bcd4ae70139df9224d331bf42 | p@chr10:127470655..127470664, + |
| 2.83e-65 | FFCP PHASE1:Mm9::chr14:63585028..63585037,-#_3e74b05bcd4ae70139df9224d331bf42 | p@chr14:63585028..63585037, - |
| 3.99e-50 | FFCP PHASE2:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 3.99e-50 | FFCP PHASE1:Mm9::chr2:152388713..152388729,+#_c356b2c847a515521a6fe753444b3a76 | p@chr2:152388713..152388729, + |
| 5.6e-50 | FFCP PHASE2:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 5.6e-50 | FFCP PHASE1:Hg19::chr2:120409486..120409492,+#_a52ba957e8ad4186f4d8110f79d26ad7 | p@chr2:120409486..120409492, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:105797641..105797656,-#_386211f7cdcce24144f83dd84ef487d5 | p4@Cyb561 |
| 1.6e-49 | FFCP PHASE1:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr11:76361451..76361499,+#_386211f7cdcce24144f83dd84ef487d5 | p@chr11:76361451..76361499, + |
| 1.6e-49 | FFCP PHASE1:Mm9::chr14:63585020..63585025,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585020..63585025, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr14:63585048..63585062,-#_386211f7cdcce24144f83dd84ef487d5 | p@chr14:63585048..63585062, - |
| 1.6e-49 | FFCP PHASE2:Mm9::chr9:35597686..35597691,-#_386211f7cdcce24144f83dd84ef487d5 | p2@D730048I06Rik, p2@Gm17727 |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr9:26732045..26732085,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26732045..26732085, + |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:63627556..63627564,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr14:63627556..63627564, - |
| 2.33e-49 | FFCP PHASE1:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr14:51734043..51734054,+#_d9799cdb5d1792b54fa1fa8cc7d7483a | p2@Eddm3b |
| 2.33e-49 | FFCP PHASE2:Mm9::chr9:26611246..26611253,-#_d9799cdb5d1792b54fa1fa8cc7d7483a | p@chr9:26611246..26611253, - |
| 3.4e-49 | FFCP PHASE1:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 3.4e-49 | FFCP PHASE2:Mm9::chr2:69981027..69981032,+#_7e60dff3c96e89262e358066b0d5d3ca | p@chr2:69981027..69981032, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE1:Hg19::chr1:172416185..172416189,-#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr1:172416185..172416189, - |
| 9.75e-45 | FFCP PHASE2:Hg19::chr10:102505655..102505689,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p10@PAX2 |
| 9.75e-45 | FFCP PHASE2:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 9.75e-45 | FFCP PHASE1:Hg19::chr14:68644730..68644737,+#_121e7bbcf9d5f9174346c0dd1cd0f66e | p@chr14:68644730..68644737, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:160573108..160573123,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:160573108..160573123, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:52712744..52712754,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:52712744..52712754, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:75798114..75798125,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:75798114..75798125, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:155698178..155698191,-#_2c808356ccd804cd36d69a04f78b05be | p@chr1:155698178..155698191, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:18213651..18213663,-#_2c808356ccd804cd36d69a04f78b05be | p1@Defb44-ps |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:96150839..96150842,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:96150839..96150842, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:20219008..20219045,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:20219008..20219045, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26599476..26599505,-#_2c808356ccd804cd36d69a04f78b05be | p3@Glb1l2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:25565920..25565950,-#_2c808356ccd804cd36d69a04f78b05be | p@chr7:25565920..25565950, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:35930667..35930691,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:35930667..35930691, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379065..21379072,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379065..21379072, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:160347529..160347538, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr17:35249011..35249020,-#_2c808356ccd804cd36d69a04f78b05be | p@chr17:35249011..35249020, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:53938008..53938022,+#_2c808356ccd804cd36d69a04f78b05be | p11@P4ha2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chrX:160347529..160347538,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:160347529..160347538, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:25706083..25706089,-#_2c808356ccd804cd36d69a04f78b05be | p4@Ido1 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:90155722..90155743,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155722..90155743, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:63779573..63779582,+#_2c808356ccd804cd36d69a04f78b05be | p@chr11:63779573..63779582, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr10:91753336..91753348,-#_2c808356ccd804cd36d69a04f78b05be | p@chr10:91753336..91753348, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21379125..21379144,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379125..21379144, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:65941913..65941923,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:65941913..65941923, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:26688157..26688159,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26688157..26688159, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:63611303..63611312,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611303..63611312, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr4:106731469..106731481,-#_2c808356ccd804cd36d69a04f78b05be | p@chr4:106731469..106731481, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:164479326..164479336,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:164479326..164479336, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr14:67453354..67453365,-#_2c808356ccd804cd36d69a04f78b05be | p@chr14:67453354..67453365, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr13:21380670..21380678,-#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21380670..21380678, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:74440187..74440209,-#_2c808356ccd804cd36d69a04f78b05be | p@chr2:74440187..74440209, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:96014490..96014496,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:96014490..96014496, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:156829476..156829504,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:156829476..156829504, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:35651788..35651804,-#_2c808356ccd804cd36d69a04f78b05be | p1@9230110F15Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148676859..148676866,-#_2c808356ccd804cd36d69a04f78b05be | p5@9230104L09Rik |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:34107562..34107572,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:34107562..34107572, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr5:110773795..110773801,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:110773795..110773801, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:31507623..31507631,+#_2c808356ccd804cd36d69a04f78b05be | p4@Atp4a |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:26719400..26719404,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:26719400..26719404, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr1:87936238..87936249,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:87936238..87936249, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:63611214..63611229,+#_2c808356ccd804cd36d69a04f78b05be | p@chr14:63611214..63611229, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:90155951..90155962,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:90155951..90155962, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:18213651..18213663,-#_2c808356ccd804cd36d69a04f78b05be | p1@Defb44-ps |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:109379339..109379349,+#_2c808356ccd804cd36d69a04f78b05be | p15@Pgap2 |
| 4.54e-44 | FFCP PHASE2:Mm9::chr12:16664775..16664784,+#_2c808356ccd804cd36d69a04f78b05be | p@chr12:16664775..16664784, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr11:53937918..53937922,+#_2c808356ccd804cd36d69a04f78b05be | p7@P4ha2 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr14:66589365..66589371,+#_2c808356ccd804cd36d69a04f78b05be | p19@Clu |
| 4.54e-44 | FFCP PHASE1:Mm9::chr11:101958887..101958896,-#_2c808356ccd804cd36d69a04f78b05be | p@chr11:101958887..101958896, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:164787162..164787188,-#_2c808356ccd804cd36d69a04f78b05be | p@chrX:164787162..164787188, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr9:34813361..34813403,-#_2c808356ccd804cd36d69a04f78b05be | p@chr9:34813361..34813403, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:148445639..148445665,+#_2c808356ccd804cd36d69a04f78b05be | p@chr7:148445639..148445665, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr17:73221034..73221051,+#_2c808356ccd804cd36d69a04f78b05be | p@chr17:73221034..73221051, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr18:62775330..62775347,-#_2c808356ccd804cd36d69a04f78b05be | p@chr18:62775330..62775347, - |
| 4.54e-44 | FFCP PHASE2:Mm9::chr9:70761931..70761971,+#_2c808356ccd804cd36d69a04f78b05be | p@chr9:70761931..70761971, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr8:19062951..19062955,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19062951..19062955, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr1:156048695..156048707,+#_2c808356ccd804cd36d69a04f78b05be | p@chr1:156048695..156048707, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:25349402..25349409,-#_2c808356ccd804cd36d69a04f78b05be | p3@Lcn12 |
| 4.54e-44 | FFCP PHASE1:Mm9::chr2:148625223..148625234,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:148625223..148625234, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chrX:50280126..50280140,+#_2c808356ccd804cd36d69a04f78b05be | p@chrX:50280126..50280140, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr6:18338054..18338077,-#_2c808356ccd804cd36d69a04f78b05be | p@chr6:18338054..18338077, - |
| 4.54e-44 | FFCP PHASE1:Mm9::chr5:31379486..31379501,+#_2c808356ccd804cd36d69a04f78b05be | p@chr5:31379486..31379501, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr2:160573108..160573123,+#_2c808356ccd804cd36d69a04f78b05be | p@chr2:160573108..160573123, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr13:21379372..21379404,+#_2c808356ccd804cd36d69a04f78b05be | p@chr13:21379372..21379404, + |
| 4.54e-44 | FFCP PHASE2:Mm9::chr8:19141429..19141440,+#_2c808356ccd804cd36d69a04f78b05be | p@chr8:19141429..19141440, + |
| 4.54e-44 | FFCP PHASE1:Mm9::chr7:105313229..105313234,-#_2c808356ccd804cd36d69a04f78b05be | p17@Capn5 |
