UBERON:0005095: Difference between revisions
From FANTOM5_SSTAR
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|subset= | |subset= | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from=UBERON:0007687 | ||
|has_quality= | |has_quality= | ||
|located_in= | |located_in= | ||
|part_of= | |part_of=UBERON:0000922 | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |is_obsolete= | ||
|preceded_by= | |preceded_by= | ||
}} | }} | ||
Revision as of 13:38, 27 June 2012
| Name: | kidney rudiment |
|---|---|
| Definition: | "." [GO:0072003] |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0005423(developing anatomical structure) |
|---|---|
| develops_from: | UBERON:0007687(kidney field) |
| part_of: | UBERON:0000922(embryo) |
Children
| develops from: | UBERON:0002113 (kidney),UBERON:0002120 (pronephros) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005095 (kidney rudiment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.73e-86 | FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_e3531214d354927045ce1bb0ec46eee2 | p4@PAX2 |
| 1.73e-86 | FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_e3531214d354927045ce1bb0ec46eee2 | p4@PAX2 |
| 2.28e-80 | FFCP PHASE1:Mm9::chr2:74542680..74542705,+#_3637be11cb55e781d755953cde98f80a | p6@Hoxd8 |
| 2.28e-80 | FFCP PHASE2:Mm9::chr2:74542680..74542705,+#_3637be11cb55e781d755953cde98f80a | p6@Hoxd8 |
| 3.64e-74 | FFCP PHASE1:Mm9::chr2:74542589..74542602,+#_01cc9b246eb8303d9144654769a08cef | p8@Hoxd8 |
| 3.64e-74 | FFCP PHASE2:Mm9::chr2:74542589..74542602,+#_01cc9b246eb8303d9144654769a08cef | p8@Hoxd8 |
| 5.03e-73 | FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_435b9f0f81898ced9be9855496bb3665 | p3@PAX2 |
| 5.03e-73 | FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_435b9f0f81898ced9be9855496bb3665 | p3@PAX2 |
| 3.13e-70 | FFCP PHASE1:Hg19::chr2:693380..693398,+#_1f2d384266eff90f48152110ddae97c9 | p@chr2:693380..693398, + |
| 3.13e-70 | FFCP PHASE2:Hg19::chr2:693380..693398,+#_1f2d384266eff90f48152110ddae97c9 | p@chr2:693380..693398, + |
| 5.44e-68 | FFCP PHASE1:Mm9::chr19:44824107..44824111,-#_7b6c4ea94d76fa61af020592b14914a3 | p@chr19:44824107..44824111, - |
| 5.44e-68 | FFCP PHASE2:Mm9::chr19:44824107..44824111,-#_7b6c4ea94d76fa61af020592b14914a3 | p@chr19:44824107..44824111, - |
| 6.57e-66 | FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_7943c70c07a617256386568ec8dd853a | p7@HOXA10 |
| 6.57e-66 | FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_7943c70c07a617256386568ec8dd853a | p7@HOXA10 |
| 2.27e-64 | FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_89047ff3c13ebae9531b5bb5f51f0ae4 | p2@PAX2 |
| 2.27e-64 | FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_89047ff3c13ebae9531b5bb5f51f0ae4 | p2@PAX2 |
| 2.61e-63 | FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_2b8deaf92ba36c1d96b35a842382086a | p4@AIF1L |
| 2.61e-63 | FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_2b8deaf92ba36c1d96b35a842382086a | p4@AIF1L |
| 9.07e-63 | FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_1ef16c24dd20c7253af520179b9dbdb7 | p1@ENST00000418041, p1@ENST00000443104 |
| 9.07e-63 | FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_1ef16c24dd20c7253af520179b9dbdb7 | p1@ENST00000418041, p1@ENST00000443104 |
| 1.43e-62 | FFCP PHASE2:Mm9::chr10:3291561..3291580,+#_83225e4782008112640f6816c5bd3704 | p@chr10:3291561..3291580, + |
| 1.43e-62 | FFCP PHASE1:Mm9::chr10:3291561..3291580,+#_83225e4782008112640f6816c5bd3704 | p@chr10:3291561..3291580, + |
| 7.58e-62 | FFCP PHASE2:Mm9::chr19:44899724..44899728,+#_b2cfb5928b0cd4fa913f10205b328d24 | p@chr19:44899724..44899728, + |
| 7.58e-62 | FFCP PHASE1:Mm9::chr19:44821149..44821161,+#_b2cfb5928b0cd4fa913f10205b328d24 | p@chr19:44821149..44821161, + |
| 7.58e-62 | FFCP PHASE1:Mm9::chr19:44899724..44899728,+#_b2cfb5928b0cd4fa913f10205b328d24 | p@chr19:44899724..44899728, + |
| 7.58e-62 | FFCP PHASE2:Mm9::chr19:44821149..44821161,+#_b2cfb5928b0cd4fa913f10205b328d24 | p@chr19:44821149..44821161, + |
| 4.78e-61 | FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_1367aa8a6db839b4577636680fa3fe45 | p4@MEGF11 |
| 4.78e-61 | FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_1367aa8a6db839b4577636680fa3fe45 | p4@MEGF11 |
| 1.07e-59 | FFCP PHASE2:Mm9::chr8:107148422..107148433,+#_1bc486457fdcae24ff46b0d1c8b4c464 | p@chr8:107148422..107148433, + |
| 1.07e-59 | FFCP PHASE1:Mm9::chr8:107148422..107148433,+#_1bc486457fdcae24ff46b0d1c8b4c464 | p@chr8:107148422..107148433, + |
| 6.23e-58 | FFCP PHASE2:Mm9::chr10:50689167..50689171,+#_d2516dd00f0000cd8d820234cc6d53f4 | p@chr10:50689167..50689171, + |
| 6.23e-58 | FFCP PHASE1:Mm9::chr10:50689167..50689171,+#_d2516dd00f0000cd8d820234cc6d53f4 | p@chr10:50689167..50689171, + |
| 8.0e-58 | FFCP PHASE2:Mm9::chr5:24755801..24755819,+#_59b521c3761f3a1daa4af4182da96e4b | p@chr5:24755801..24755819, + |
| 8.0e-58 | FFCP PHASE1:Mm9::chr5:24755801..24755819,+#_59b521c3761f3a1daa4af4182da96e4b | p@chr5:24755801..24755819, + |
| 1.03e-57 | FFCP PHASE1:Mm9::chr19:59532611..59532623,+#_eefefe092d6698eb433a1f7f5836cd94 | p@chr19:59532611..59532623, + |
| 1.03e-57 | FFCP PHASE2:Mm9::chr19:59532611..59532623,+#_eefefe092d6698eb433a1f7f5836cd94 | p@chr19:59532611..59532623, + |
| 2.2e-56 | FFCP PHASE2:Mm9::chr4:44956599..44956663,+#_8de1bfdd0726fff8b4026e79c5965f55 | p1@ENSMUST00000154177 |
| 2.2e-56 | FFCP PHASE1:Mm9::chr4:44956599..44956663,+#_8de1bfdd0726fff8b4026e79c5965f55 | p1@ENSMUST00000154177 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr10:39251651..39251690,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:39251651..39251690, + |
| 9.89e-56 | FFCP PHASE1:Mm9::chr5:5694436..5694447,-#_3404a78f3273636b8cfc82454777e178 | p7@Steap2 |
| 9.89e-56 | FFCP PHASE1:Mm9::chr2:74971765..74971779,-#_3404a78f3273636b8cfc82454777e178 | p@chr2:74971765..74971779, - |
| 9.89e-56 | FFCP PHASE1:Mm9::chr7:31244771..31244782,+#_3404a78f3273636b8cfc82454777e178 | p2@Nphs1 |
| 9.89e-56 | FFCP PHASE1:Mm9::chr10:50622895..50622905,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:50622895..50622905, + |
| 9.89e-56 | FFCP PHASE1:Mm9::chr7:126785928..126785945,-#_3404a78f3273636b8cfc82454777e178 | p3@uc009jll.1 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr7:126785928..126785945,-#_3404a78f3273636b8cfc82454777e178 | p3@uc009jll.1 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr8:118959620..118959632,-#_3404a78f3273636b8cfc82454777e178 | p@chr8:118959620..118959632, - |
| 9.89e-56 | FFCP PHASE2:Mm9::chr2:74971765..74971779,-#_3404a78f3273636b8cfc82454777e178 | p@chr2:74971765..74971779, - |
| 9.89e-56 | FFCP PHASE2:Mm9::chr10:51915118..51915138,-#_3404a78f3273636b8cfc82454777e178 | p4@Ros1 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr1:89952042..89952053,+#_3404a78f3273636b8cfc82454777e178 | p2@LOC100048662, p2@LOC100048744, p2@Ugt1a10 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr5:5694436..5694447,-#_3404a78f3273636b8cfc82454777e178 | p7@Steap2 |
| 9.89e-56 | FFCP PHASE2:Mm9::chr10:79277411..79277429,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:79277411..79277429, + |
| 9.89e-56 | FFCP PHASE1:Mm9::chr7:47891824..47891827,-#_3404a78f3273636b8cfc82454777e178 | p@chr7:47891824..47891827, - |
| 9.89e-56 | FFCP PHASE2:Mm9::chr19:17554168..17554181,+#_3404a78f3273636b8cfc82454777e178 | p@chr19:17554168..17554181, + |
| 9.89e-56 | FFCP PHASE2:Mm9::chr7:31244771..31244782,+#_3404a78f3273636b8cfc82454777e178 | p2@Nphs1 |
| 9.89e-56 | FFCP PHASE1:Mm9::chr8:118959620..118959632,-#_3404a78f3273636b8cfc82454777e178 | p@chr8:118959620..118959632, - |
| 9.89e-56 | FFCP PHASE2:Mm9::chr7:47891824..47891827,-#_3404a78f3273636b8cfc82454777e178 | p@chr7:47891824..47891827, - |
| 9.89e-56 | FFCP PHASE1:Mm9::chr10:39251651..39251690,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:39251651..39251690, + |
| 9.89e-56 | FFCP PHASE1:Mm9::chr10:51915118..51915138,-#_3404a78f3273636b8cfc82454777e178 | p4@Ros1 |
| 9.89e-56 | FFCP PHASE1:Mm9::chr1:89952042..89952053,+#_3404a78f3273636b8cfc82454777e178 | p2@LOC100048662, p2@LOC100048744, p2@Ugt1a10 |
| 9.89e-56 | FFCP PHASE1:Mm9::chr10:79277411..79277429,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:79277411..79277429, + |
| 9.89e-56 | FFCP PHASE2:Mm9::chr10:50622895..50622905,+#_3404a78f3273636b8cfc82454777e178 | p@chr10:50622895..50622905, + |
| 9.89e-56 | FFCP PHASE1:Mm9::chr19:17554168..17554181,+#_3404a78f3273636b8cfc82454777e178 | p@chr19:17554168..17554181, + |
| 1.76e-55 | FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_0e98a7df5c2ff374246ff95bb16c88df | p@chr18:3456189..3456200, + |
| 1.76e-55 | FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_0e98a7df5c2ff374246ff95bb16c88df | p@chr18:3456189..3456200, + |
| 3.07e-55 | FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_5886faa4d81417f386cebdb2ffd424a3 | p@chr9:119741711..119741743, - |
| 3.07e-55 | FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_5886faa4d81417f386cebdb2ffd424a3 | p@chr9:119741711..119741743, - |
| 6.17e-52 | FFCP PHASE1:Mm9::chr11:75720190..75720216,-#_23747fe47d2bcb244da7a518a6e9f989 | p@chr11:75720190..75720216, - |
| 6.17e-52 | FFCP PHASE2:Mm9::chr11:75720190..75720216,-#_23747fe47d2bcb244da7a518a6e9f989 | p@chr11:75720190..75720216, - |
| 6.97e-52 | FFCP PHASE2:Mm9::chr13:108834249..108834299,+#_8c5b881a80b88fa73bab50027e7b7b2a | p3@2810008M24Rik |
| 6.97e-52 | FFCP PHASE1:Mm9::chr13:108834249..108834299,+#_8c5b881a80b88fa73bab50027e7b7b2a | p3@2810008M24Rik |
| 1.64e-51 | FFCP PHASE1:Mm9::chr2:74975548..74975563,-#_5b2748b19609c31bfa67fb9689abd2ff | p1@ENSMUST00000143898 |
| 1.64e-51 | FFCP PHASE2:Mm9::chr2:74975548..74975563,-#_5b2748b19609c31bfa67fb9689abd2ff | p1@ENSMUST00000143898 |
| 6.24e-51 | FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_aa8306664bc252908ecc84f8b3fd47a4 | p@chr7:7606139..7606151, - |
| 6.24e-51 | FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_aa8306664bc252908ecc84f8b3fd47a4 | p@chr7:7606139..7606151, - |
| 1.67e-50 | FFCP PHASE1:Mm9::chr3:96637141..96637180,+#_6ee22ed867664842cbb349fb36ce8802 | p4@Pdzk1 |
| 1.67e-50 | FFCP PHASE2:Mm9::chr3:96637141..96637180,+#_6ee22ed867664842cbb349fb36ce8802 | p4@Pdzk1 |
| 2.31e-50 | FFCP PHASE2:Mm9::chr13:98786159..98786170,-#_ea58d19e29ad31a8192e84eea2a8756e | p8@Rgnef |
| 2.31e-50 | FFCP PHASE1:Mm9::chr13:98786159..98786170,-#_ea58d19e29ad31a8192e84eea2a8756e | p8@Rgnef |
| 2.36e-50 | FFCP PHASE1:Mm9::chr16:88563303..88563315,-#_24ee8803274e0093ebdb066eaddfc47c | p5@Cldn8 |
| 2.36e-50 | FFCP PHASE2:Mm9::chr16:88563303..88563315,-#_24ee8803274e0093ebdb066eaddfc47c | p5@Cldn8 |
| 2.38e-50 | FFCP PHASE1:Mm9::chr3:154257229..154257241,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p@chr3:154257229..154257241, - |
| 2.38e-50 | FFCP PHASE2:Mm9::chr10:12353875..12353921,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p@chr10:12353875..12353921, - |
| 2.38e-50 | FFCP PHASE2:Mm9::chr7:31244710..31244719,+#_cc2cfa98dad0d300a47f0a98ca82eeed | p4@Nphs1 |
| 2.38e-50 | FFCP PHASE1:Mm9::chr10:12353875..12353921,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p@chr10:12353875..12353921, - |
| 2.38e-50 | FFCP PHASE1:Mm9::chr7:31244710..31244719,+#_cc2cfa98dad0d300a47f0a98ca82eeed | p4@Nphs1 |
| 2.38e-50 | FFCP PHASE1:Mm9::chr7:126785968..126785980,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p2@uc009jll.1 |
| 2.38e-50 | FFCP PHASE2:Mm9::chr7:126785968..126785980,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p2@uc009jll.1 |
| 2.38e-50 | FFCP PHASE2:Mm9::chr3:154257229..154257241,-#_cc2cfa98dad0d300a47f0a98ca82eeed | p@chr3:154257229..154257241, - |
| 3.53e-50 | FFCP PHASE1:Mm9::chr10:3291584..3291599,+#_c5b9bcff3f822b0de006a4b232372c72 | p@chr10:3291584..3291599, + |
| 3.53e-50 | FFCP PHASE2:Mm9::chr10:3291584..3291599,+#_c5b9bcff3f822b0de006a4b232372c72 | p@chr10:3291584..3291599, + |
| 5.98e-50 | FFCP PHASE1:Mm9::chr17:34764056..34764069,-#_312535c85320f4e62a287013fa0314a8 | p9@Ppt2 |
| 5.98e-50 | FFCP PHASE2:Mm9::chr17:34764056..34764069,-#_312535c85320f4e62a287013fa0314a8 | p9@Ppt2 |
| 6.48e-50 | FFCP PHASE2:Mm9::chr4:107817557..107817589,-#_abdc2c1fa79291021f61bcc83482603f | p5@Scp2 |
| 6.48e-50 | FFCP PHASE1:Mm9::chr4:107817557..107817589,-#_abdc2c1fa79291021f61bcc83482603f | p5@Scp2 |
| 7.43e-50 | FFCP PHASE2:Mm9::chr2:74543235..74543246,+#_5f81860d8af0a9b7d7f0339d95be898c | p7@Hoxd8 |
| 7.43e-50 | FFCP PHASE1:Mm9::chr2:74543235..74543246,+#_5f81860d8af0a9b7d7f0339d95be898c | p7@Hoxd8 |
| 1.21e-49 | FFCP PHASE2:Mm9::chr2:74543143..74543158,+#_d64802432b9b45e31ac67962301aeece | p9@Hoxd8 |
| 1.21e-49 | FFCP PHASE2:Mm9::chr12:31949130..31949155,+#_d64802432b9b45e31ac67962301aeece | p@chr12:31949130..31949155, + |
| 1.21e-49 | FFCP PHASE1:Mm9::chr14:71030002..71030013,-#_d64802432b9b45e31ac67962301aeece | p14@Epb4.9 |
| 1.21e-49 | FFCP PHASE1:Mm9::chr11:75720175..75720186,-#_d64802432b9b45e31ac67962301aeece | p@chr11:75720175..75720186, - |
