FFCP PHASE1:Hg19::chr1:155939409..155939425,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:155939409..155939425,- | |id=chr1:155939409..155939425,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.62e-15;82!UBERON:0010122;4.52e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.21e-89!57;UBERON:0005068!7.21e-89!57;UBERON:0006241!7.21e-89!57;UBERON:0007135!7.21e-89!57;UBERON:0001893!1.47e-78!34;UBERON:0002020!8.73e-78!34;UBERON:0003528!8.73e-78!34;UBERON:0002791!2.55e-75!33;UBERON:0001017!1.02e-74!82;UBERON:0005743!6.46e-74!86;UBERON:0002780!1.47e-73!41;UBERON:0001890!1.47e-73!41;UBERON:0006240!1.47e-73!41;UBERON:0002616!2.39e-73!59;UBERON:0001869!5.91e-73!32;UBERON:0003080!1.22e-71!42;UBERON:0000955!2.13e-71!69;UBERON:0006238!2.13e-71!69;UBERON:0000073!5.88e-66!94;UBERON:0001016!5.88e-66!94;UBERON:0003075!1.51e-64!86;UBERON:0007284!1.51e-64!86;UBERON:0002346!3.29e-61!90;UBERON:0002619!2.69e-59!22;UBERON:0001950!1.86e-53!20;UBERON:0000956!9.14e-52!25;UBERON:0000203!9.14e-52!25;UBERON:0003056!6.29e-50!61;UBERON:0007023!1.03e-48!115;UBERON:0000033!5.98e-42!123;UBERON:0000153!1.66e-39!129;UBERON:0007811!1.66e-39!129;UBERON:0004121!1.19e-33!169;UBERON:0000924!1.29e-32!173;UBERON:0006601!1.29e-32!173;UBERON:0002420!2.28e-28!9;UBERON:0007245!2.28e-28!9;UBERON:0010009!2.28e-28!9;UBERON:0010011!2.28e-28!9;UBERON:0000454!2.28e-28!9;UBERON:0002308!1.85e-27!9;UBERON:0000125!1.85e-27!9;UBERON:0009663!2.28e-22!7;UBERON:0000025!2.55e-21!194;UBERON:0000200!3.60e-20!6;UBERON:0001871!7.17e-20!7;UBERON:0003076!9.10e-18!15;UBERON:0003057!9.10e-18!15;UBERON:0000349!1.01e-16!5;UBERON:0002021!1.68e-16!5;UBERON:0004111!4.91e-16!241;UBERON:0000483!5.89e-15!309;UBERON:0000119!1.07e-14!312;UBERON:0000369!4.73e-14!4;UBERON:0002435!4.73e-14!4;UBERON:0000204!4.73e-14!4;UBERON:0010082!4.73e-14!4;UBERON:0000475!4.92e-14!365;UBERON:0000064!2.08e-13!219;UBERON:0002298!6.86e-13!8;UBERON:0000477!1.10e-12!286;UBERON:0001872!2.85e-11!5;UBERON:0004733!3.94e-11!12;UBERON:0002028!3.94e-11!12;UBERON:0007277!3.94e-11!12;UBERON:0002771!7.52e-11!3;UBERON:0005383!8.85e-11!3;UBERON:0005382!8.85e-11!3;UBERON:0004732!3.35e-10!13;UBERON:0002240!1.37e-09!3;UBERON:0000988!1.55e-09!3;UBERON:0006331!1.75e-09!3;UBERON:0002680!5.59e-08!9;UBERON:0001895!5.59e-08!9;UBERON:0010092!5.59e-08!9;UBERON:0001870!8.39e-08!2;UBERON:0001876!1.06e-07!2;UBERON:0001873!1.24e-07!2;UBERON:0010122!1.24e-07!2;UBERON:0000062!1.63e-07!511;UBERON:0001954!1.96e-07!2;UBERON:0003022!1.96e-07!2;UBERON:0002421!1.96e-07!2;UBERON:0002600!1.96e-07!2;UBERON:0001875!2.23e-07!2;UBERON:0006514!2.23e-07!2;UBERON:0002360!3.26e-07!2;UBERON:0000094!3.26e-07!2;UBERON:0007645!3.26e-07!2;UBERON:0000481!3.77e-07!347;UBERON:0002148!8.51e-07!2;UBERON:0009662!8.51e-07!2 | |ontology_enrichment_uberon=UBERON:0001049!7.21e-89!57;UBERON:0005068!7.21e-89!57;UBERON:0006241!7.21e-89!57;UBERON:0007135!7.21e-89!57;UBERON:0001893!1.47e-78!34;UBERON:0002020!8.73e-78!34;UBERON:0003528!8.73e-78!34;UBERON:0002791!2.55e-75!33;UBERON:0001017!1.02e-74!82;UBERON:0005743!6.46e-74!86;UBERON:0002780!1.47e-73!41;UBERON:0001890!1.47e-73!41;UBERON:0006240!1.47e-73!41;UBERON:0002616!2.39e-73!59;UBERON:0001869!5.91e-73!32;UBERON:0003080!1.22e-71!42;UBERON:0000955!2.13e-71!69;UBERON:0006238!2.13e-71!69;UBERON:0000073!5.88e-66!94;UBERON:0001016!5.88e-66!94;UBERON:0003075!1.51e-64!86;UBERON:0007284!1.51e-64!86;UBERON:0002346!3.29e-61!90;UBERON:0002619!2.69e-59!22;UBERON:0001950!1.86e-53!20;UBERON:0000956!9.14e-52!25;UBERON:0000203!9.14e-52!25;UBERON:0003056!6.29e-50!61;UBERON:0007023!1.03e-48!115;UBERON:0000033!5.98e-42!123;UBERON:0000153!1.66e-39!129;UBERON:0007811!1.66e-39!129;UBERON:0004121!1.19e-33!169;UBERON:0000924!1.29e-32!173;UBERON:0006601!1.29e-32!173;UBERON:0002420!2.28e-28!9;UBERON:0007245!2.28e-28!9;UBERON:0010009!2.28e-28!9;UBERON:0010011!2.28e-28!9;UBERON:0000454!2.28e-28!9;UBERON:0002308!1.85e-27!9;UBERON:0000125!1.85e-27!9;UBERON:0009663!2.28e-22!7;UBERON:0000025!2.55e-21!194;UBERON:0000200!3.60e-20!6;UBERON:0001871!7.17e-20!7;UBERON:0003076!9.10e-18!15;UBERON:0003057!9.10e-18!15;UBERON:0000349!1.01e-16!5;UBERON:0002021!1.68e-16!5;UBERON:0004111!4.91e-16!241;UBERON:0000483!5.89e-15!309;UBERON:0000119!1.07e-14!312;UBERON:0000369!4.73e-14!4;UBERON:0002435!4.73e-14!4;UBERON:0000204!4.73e-14!4;UBERON:0010082!4.73e-14!4;UBERON:0000475!4.92e-14!365;UBERON:0000064!2.08e-13!219;UBERON:0002298!6.86e-13!8;UBERON:0000477!1.10e-12!286;UBERON:0001872!2.85e-11!5;UBERON:0004733!3.94e-11!12;UBERON:0002028!3.94e-11!12;UBERON:0007277!3.94e-11!12;UBERON:0002771!7.52e-11!3;UBERON:0005383!8.85e-11!3;UBERON:0005382!8.85e-11!3;UBERON:0004732!3.35e-10!13;UBERON:0002240!1.37e-09!3;UBERON:0000988!1.55e-09!3;UBERON:0006331!1.75e-09!3;UBERON:0002680!5.59e-08!9;UBERON:0001895!5.59e-08!9;UBERON:0010092!5.59e-08!9;UBERON:0001870!8.39e-08!2;UBERON:0001876!1.06e-07!2;UBERON:0001873!1.24e-07!2;UBERON:0010122!1.24e-07!2;UBERON:0000062!1.63e-07!511;UBERON:0001954!1.96e-07!2;UBERON:0003022!1.96e-07!2;UBERON:0002421!1.96e-07!2;UBERON:0002600!1.96e-07!2;UBERON:0001875!2.23e-07!2;UBERON:0006514!2.23e-07!2;UBERON:0002360!3.26e-07!2;UBERON:0000094!3.26e-07!2;UBERON:0007645!3.26e-07!2;UBERON:0000481!3.77e-07!347;UBERON:0002148!8.51e-07!2;UBERON:0009662!8.51e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.15e-96;32!UBERON:0001893;6.77e-96;34!UBERON:0002791;1.64e-89;32!UBERON:0002619;1.60e-84;22!UBERON:0003528;1.63e-80;34!UBERON:0002020;1.63e-80;34!UBERON:0001950;2.11e-75;20!UBERON:0002780;5.07e-75;41!UBERON:0001890;5.07e-75;41!UBERON:0000956;3.03e-74;25!UBERON:0000203;3.03e-74;25!UBERON:0000073;1.31e-46;53!UBERON:0002616;1.31e-46;53!UBERON:0001017;1.08e-37;75!UBERON:0000955;3.64e-37;68!UBERON:0002420;6.44e-35;9!UBERON:0007245;6.44e-35;9!UBERON:0010009;6.44e-35;9!UBERON:0010011;6.44e-35;9!UBERON:0000454;6.44e-35;9!UBERON:0000200;9.76e-31;6!UBERON:0001871;9.83e-26;6!UBERON:0009663;1.19e-25;7!UBERON:0000349;2.61e-25;5!UBERON:0001016;3.58e-24;83!UBERON:0000369;3.70e-21;4!UBERON:0002435;3.70e-21;4!UBERON:0000204;3.70e-21;4!UBERON:0000125;7.82e-20;9!UBERON:0002308;7.82e-20;9!UBERON:0001872;5.96e-17;5!UBERON:0002021;9.72e-17;5!UBERON:0001870;3.50e-16;3!UBERON:0005383;5.01e-16;3!UBERON:0005382;5.01e-16;3!UBERON:0007023;1.87e-13;114!UBERON:0002771;2.93e-11;2!UBERON:0001876;3.59e-11;2!UBERON:0002702;3.59e-11;2!UBERON:0001873;4.52e-11;2!UBERON:0011216;6.32e-11;132!UBERON:0001954;9.16e-11;2!UBERON:0003022;9.16e-11;2!UBERON:0002421;9.16e-11;2!UBERON:0002600;9.16e-11;2!UBERON:0001875;1.27e-10;2!UBERON:0006514;1.27e-10;2!UBERON:0010314;9.11e-08;132!UBERON:0001882;7.49e-07;1!UBERON:0005403;7.49e-07;1!UBERON:0002902;8.34e-07;1!UBERON:0009899;8.34e-07;1!UBERON:0002022;8.81e-07;1!UBERON:0007190;9.29e-07;1!UBERON:0002581;9.81e-07;1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,9.28418148309384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6013256992378,9.83341840515623,7.98455192004777,0,0,0,0,0,0,0,0,0,8.85741385813839,7.47697919477529,0,0.221158519862449,0.295547618953547,9.21418668046685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,12.6502800691683,0,0,0,0,0,1.83643656978294,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1686455588228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,1.9166753044879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,5.44813624446302,0,0,0,0,0,18.6501138940136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,7.68765468882368,9.63970166440049,0,0.110929051536852,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5076411475315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5810196324104,2.8339315265117,9.41839768437193,9.02512002659322,0.504143392443436,19.2948734375168,8.55820921848811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6142458161251,7.02970288752463,9.92096623205684,12.7465778489753,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.883606528698812,14.798874051641,0,0,0,12.2550160134481,0,0,0,0,0.0714765441766563,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.573358332605805,0,20.1934725867017,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30985586758065,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272906150057846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.22664428346111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0.590789906681404,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,9.28418148309384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6013256992378,9.83341840515623,7.98455192004777,0,0,0,0,0,0,0,0,0,8.85741385813839,7.47697919477529,0,0.221158519862449,0.295547618953547,9.21418668046685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61762719153625,0,12.6502800691683,0,0,0,0,0,1.83643656978294,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1686455588228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.00420288709789,1.9166753044879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.77137813885582,5.44813624446302,0,0,0,0,0,18.6501138940136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0.39669780522807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08854543973589,7.68765468882368,9.63970166440049,0,0.110929051536852,1.42821726765182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5076411475315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5810196324104,2.8339315265117,9.41839768437193,9.02512002659322,0.504143392443436,19.2948734375168,8.55820921848811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.6142458161251,7.02970288752463,9.92096623205684,12.7465778489753,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.883606528698812,14.798874051641,0,0,0,12.2550160134481,0,0,0,0,0.0714765441766563,0,0,0.695433089210318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.573358332605805,0,20.1934725867017,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.30985586758065,0,0,0,0,0,0,0,0,0.342233301085281,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@ARHGEF2 | |short_description=p9@ARHGEF2 | ||
}} | }} |
Revision as of 22:32, 13 August 2012
Short description: | p9@ARHGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_ARHGEF2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -18bp_to_ENST00000462460_5end |
EntrezGene: | ARHGEF2 |
HGNC: | 682 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Ontology term | p-value | n |
---|
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.