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MacroAPE 1083:HSF1 f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;900.2845056299682;246.88800493452695;721.1799420798628;212.64754735563767!2;146.01881823238054;67.73232407111735;1805.0321750803907;62.21668...")
 
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1783!10827-111C8;0.982637!10789-110H6;0.687541!10828-111C9;0.143253!10788-110H5;0.589052!10792-110H9;0.746605!10765-110E9;0.438407!10829-111D1;0.272775!10830-111D2;0.80296!10831-111D3;0.321898!10832-111D4;0.874039!10833-111D5;0.625435!10764-110E8;0.748375!10770-110F5;0.326235!10399-106A3;0.687729!10400-106A4;0.947091!10405-106A9;0.820148!10834-111D6;0.826698!10835-111D7;0.859812!10836-111D8;0.35414!10837-111D9;0.342498!10699-109G6;0.876768!10802-111A1;0.255815!10796-110I4;0.292822!10010-101C1;0.41793!10810-111A9;0.813947!10421-106C7;0.803945!10708-109H6;0.991834!12235-129G3;0.352428!12236-129G4;0.141071!12237-129G5;0.87168!10167-103B5;0.281889!10151-102I7;0.60503!10428-106D5;0.747872!10795-110I3;0.542193!10805-111A4;0.375871!10052-101G7;0.0927775!10189-103D9;0.459762!10589-108D4;0.482066!10425-106D2;0.146199!10427-106D4;0.0715968!10702-109G9;0.828819!10432-106D9;0.285129!10496-107C1;0.914812!10718-109I7;0.718139!10011-101C2;0.246477!10053-101G8;0.905104!10686-109F2;0.00776092!10084-102B3;0.176096!10012-101C3;0.531883!10085-102B4;0.8917!10482-107A5;0.546952!10419-106C5;0.600988!10080-102A8;0.204639!10760-110E4;0.119166!10709-109H7;0.251803!10710-109H8;0.558771!10703-109H1;0.841994!10719-109I8;0.321003!10642-109A3;0.739783!10177-103C6;0.494564!10164-103B2;0.804497!10173-103C2;0.750833!10166-103B4;0.727384!10083-102B2;0.854102!10188-103D8;0.316536!10552-107I3;0.844346!10553-107I4;0.464501!10013-101C4;0.549874!10536-107G5;0.418405!10618-108G6;0.789808!10423-106C9;0.805268!10785-110H2;0.892336!12238-129G6;0.697811!12239-129G7;0.109518!12240-129G8;0.729676!10416-106C2;0.237118!10801-110I9;0.875675!10766-110F1;0.701303!10824-111C5;0.439108!10825-111C6;0.530826!10826-111C7;0.485338!10454-106G4;0.424552!10409-106B4;0.422903!10638-108I8;0.449176!10636-108I6;0.998361!10513-107D9;0.549382!10420-106C6;0.561464!10082-102B1;0.088866!10014-101C5;0.0912575!10070-101I7;0.106912!10452-106G2;0.12334!10453-106G3;0.0905845!10449-106F8;0.410966!10042-101F6;0.388449!10069-101I6;0.584012!10193-103E4;0.882909!10631-108I1;0.701522!10438-106E6;0.749279!10488-107B2;0.218225!10196-103E7;0.89968!10071-101I8;0.935587!10071-101I8;0.283656!10041-101F5;0.144569!10451-106G1;0.322012!10450-106F9;0.906632!10604-108F1;0.899757!10605-108F2;0.99713!10606-108F3;0.989668!10603-108E9;0.856031!10497-107C2;0.997206!10448-106F7;0.956538!10643-109A4;0.976611!10426-106D3;0.864157!10431-106D8;0.94438!10197-103E8;0.156069!10443-106F2;0.604328!10815-111B5;0.744907!10816-111B6;0.0145528!10817-111B7;0.163073!10015-101C6;0.0233947!10410-106B5;0.808011!10054-101G9;0.689249!10758-110E2;0.793365!10711-109H9;0.745028!10040-101F4;0.0723094!10470-106I2;0.672629!10415-106C1;0.165975!10198-103E9;0.237342!10614-108G2;0.33729!10612-108F9;0.308822!10549-107H9;0.696829!10615-108G3;0.877477!10487-107B1;0.0540963!10433-106E1;0.395598!10688-109F4;0.225977!10444-106F3;0.994559!10444-106F3;0.691009!10485-107A8;0.851953!10413-106B8;0.25716!10175-103C4;0.334594!10161-103A8;0.754374!12131-128D7;0.6947!10624-108H3;0.0372507!10712-109I1;0.600152!10205-103F7;0.702103!10206-103F8;0.747126!10207-103F9;0.455201!10050-101G5;0.032946!10051-101G6;0.0991583!10016-101C7;0.22646!10046-101G1;0.548231!10778-110G4;0.46735!10633-108I3;0.359046!10818-111B8;0.934041!10819-111B9;0.447353!10820-111C1;0.41611!10484-107A7;0.384878!10808-111A7;0.426833!10169-103B7;0.776735!10153-102I9;0.535326!13425-144D5;0.801331!13433-144E4;0.860865!13437-144E8;0.879746!11904-125F5;0.719405!11905-125F6;0.39115!10039-101F3;0.545159!10791-110H8;0.749529!10017-101C8;0.725812!10045-101F9;0.633038!10509-107D5;0.887569!10839-111E2;0.176022!10692-109F8;0.846386!10079-102A7;0.898882!10078-102A6;0.212749!10721-110A1;0.59021!10569-108B2;0.834136!10570-108B3;0.703104!10571-108B4;0.0353484!10647-109A8;0.179922!10752-110D5;0.697631!10782-110G8;0.779593!10726-110A6;0.249487!10018-101C9;0.76917!10086-102B5;0.224781!10182-103D2;0.633461!10165-103B3;0.61899!10499-107C4;0.399433!10408-106B3;0.477771!10019-101D1;0.0121254!10068-101I5;0.879235!10075-102A3;0.876287!10077-102A5;0.566363!10727-110A7;0.394118!10775-110G1;0.300313!10412-106B7;0.385046!12231-129F8;0.117205!12232-129F9;0.14905!12233-129G1;0.219707!12234-129G2;0.144557!10414-106B9;0.126114!10170-103B8;0.243324!10183-103D3;0.410513!10150-102I6;0.728426!10174-103C3;0.662814!10155-103A2;0.334311!10038-101F2;0.430907!10838-111E1;0.869087!10759-110E3;0.329925!10514-107E1;0.207229!10465-106H6;0.868849!10691-109F7;0.801221!10843-111E6;0.0307175!10844-111E7;0.0905644!11747-123G1;0.112716!11748-123G2;0.14737!11749-123G3;0.165962!11750-123G4;0.117252!11751-123G5;0.16263!11840-124H4;0.293144!11752-123G6;0.469759!11753-123G7;0.016948!11754-123G8;0.0844345!11755-123G9;0.322386!11756-123H1;0.0593583!11833-124G6;0.161599!11760-123H5;0.0510378!11836-124G9;0.205819!11758-123H3;0.288772!11835-124G8;0.148478!11762-123H7;0.578485!11838-124H2;0.0650188!11757-123H2;0.215834!11759-123H4;0.226949!11761-123H6;0.456682!11842-124H6;0.193668!11837-124H1;0.713327!10568-108B1;0.375647!13230-141I8;0.154649!13231-141I9;0.875525!10696-109G3;0.872891!10493-107B7;0.889935!10494-107B8;0.151571!10850-111F4;0.752439!10851-111F5;0.931234!10852-111F6;0.00587641!10853-111F7;0.0735772!10854-111F8;0.940707!10855-111F9;0.962631!10856-111G1;0.0293672!10847-111F1;0.461319!10846-111E9;0.108737!10848-111F2;0.36581!10845-111E8;0.725934!10857-111G2;0.571976!10858-111G3;0.107505!10156-103A3;0.0218616!11901-125F2;0.743346!11902-125F3;0.206258!11903-125F4;0.262687!10689-109F5;0.456219!10648-109A9;0.640112!10784-110H1;0.224519!10744-110C6;0.885358!10772-110F7;0.542035!10474-106I6;0.730264!10600-108E6;0.965516!10684-109E9;0.593175!12226-129F3;0.424318!12227-129F4;0.534195!10508-107D4;0.0617353!10539-107G8;0.15626!10607-108F4;0.118792!10555-107I6;0.130437!10774-110F9;0.636519!10637-108I7;0.654333!10663-109C6;0.135663!10728-110A8;0.228643!10729-110A9;0.9774!10430-106D7;0.278975!10730-110B1;0.289093!10813-111B3;0.743946!10812-111B2;0.60499!10037-101F1;0.203968!10172-103C1;0.766604!10163-103B1;0.599654!10076-102A4;0.631704!10073-102A1;0.645154!10036-101E9;0.197129!10195-103E6;0.693922!10277-104E7;0.850284!10434-106E2;0.116054!10550-107I1;0.688496!10545-107H5;0.166342!10544-107H4;0.718313!10704-109H2;0.525232!10510-107D6;0.0172001!10558-107I9;0.878121!10020-101D2;0.458975!10732-110B3;0.751122!10049-101G4;0.0570432!10698-109G5;0.496209!10437-106E5;0.867542!10417-106C3;0.57577!10035-101E8;0.602355!10171-103B9;0.883475!10157-103A4;0.678368!10034-101E7;0.564333!10072-101I9;0.880086!10199-103F1;0.124638!10200-103F2;0.503985!10697-109G4;0.575469!10723-110A3;0.307262!10179-103C8;0.348248!10160-103A7;0.649572!10180-103C9;0.849115!10162-103A9;0.534374!10021-101D3;0.657058!10840-111E3;0.78619!10706-109H4;0.559958!10033-101E6;0.105243!10032-101E5;0.978633!10490-107B4;0.776462!10439-106E7;0.980841!10022-101D4;0.619362!10176-103C5;0.956935!10469-106I1;0.867031!10067-101I4;0.726853!10411-106B6;0.308103!10471-106I3;0.502935!10030-101E3;0.819376!10475-106I7;0.334461!10787-110H4;0.362658!10477-106I9;0.802578!10695-109G2;0.816402!11771-123I7;0.281434!11772-123I8;0.401693!11773-123I9;0.608071!10093-102C3;0.642716!10442-106F1;0.997393!10442-106F1;0.740198!10201-103F3;0.940323!10639-108I9;0.922873!11843-124H7;0.118544!11841-124H5;0.169503!10693-109F9;0.235481!10436-106E4;0.286689!10483-107A6;0.192982!10282-104F3;0.249361!10023-101D5;0.967881!10066-101I3;0.745948!10065-101I2;0.332117!10800-110I8;0.60159!10610-108F7;0.112086!10841-111E4;0.00563505!10541-107H1;0.788836!10842-111E5;0.0541211!10562-108A4;0.572252!10024-101D6;0.0424451!10064-101I1;0.0213767!10609-108F6;0.0243473!10048-101G3;0.139141!10781-110G7;0.971216!10181-103D1;0.065451!10159-103A6;0.8521!10056-101H2;0.370526!10737-110B8;0.429486!10025-101D7;0.163963!10044-101F8;0.265492!10424-106D1;0.808178!10463-106H4;0.329075!10616-108G4;0.882735!10486-107A9;0.209125!10062-101H8;0.83995!10202-103F4;0.16334!10158-103A5;0.711448!10441-106E9;0.382146!10031-101E4;0.0296393!10063-101H9;0.697666!10063-101H9;0.142447!11763-123H8;0.0952302!11765-123I1;0.787779!11768-123I4;0.587066!10807-111A6;0.69968!10790-110H7;0.948495!10798-110I6;0.390174!10786-110H3;0.147478!10591-108D6;0.934516!10593-108D8;0.151593!10590-108D5;0.423169!10026-101D8;0.960976!10096-102C6;0.187725!10168-103B6;0.0746458!10154-103A1;0.837494!10209-103G2;0.583224!10061-101H7;0.548085!10027-101D9;0.371052!10043-101F7;0.0166029!10783-110G9;0.56268!10028-101E1;0.382521!10060-101H6;0.507391!10203-103F5;0.867459!10059-101H5;0.679995!10047-101G2;0.886277!10029-101E2;0.518979!10058-101H4;0.337462!10418-106C4;0.957332!10492-107B6;0.842099!10694-109G1;0.775188!10797-110I5;0.690813!10057-101H3;0.845191!10100-102D1;0.738394!10055-101H1;0.688729!10204-103F6;0.981343!10191-103E2;0.000107502!10563-108A5;0.63351
|name=HSF1_f2
|name=HSF1_f2
|tomtom_result=ABF2#MA0266.1;-6;0.00215318;1.02491;1;7;AGAAAGTTCTAGAA;CTCTAGA;+!MGA1#MA0336.1;-2;0.00613697;2.9212;1;12;AGAAAGTTCTAGAA;AGGACTATAGAACACTCTAAA;+!YER184C#MA0424.1;-6;0.00938883;4.46908;1;8;AGAAAGTTCTAGAA;CTCCGGAA;+!Cebpa#MA0102.1;-2;0.0101259;4.81994;1;12;AGAAAGTTCTAGAA;GAGATTGCGAAA;-!sd#MA0243.1;-1;0.0105545;5.02394;1;12;AGAAAGTTCTAGAA;GACATTCCTCGA;+!ARO80#MA0273.1;1;0.0188256;8.96099;1;14;AGAAAGTTCTAGAA;GATAATTCTCGGCAAGTATGT;+!Stat3#MA0144.1;-6;0.0202299;9.62943;1;8;AGAAAGTTCTAGAA;TTCCAGGAAG;+
}}
}}

Latest revision as of 13:03, 7 September 2012

Full Name: HSF1_f2

Motif matrix
POACGT
1900.2845056299682246.88800493452695721.1799420798628212.64754735563767
2146.0188182323805467.732324071117351805.032175080390762.216682616085315
31751.573959006525799.7798018945557571.5051721565525158.141066942346
41697.8530988954549157.11720535488485144.1449623163602581.88473343328027
5609.4278829797199445.70595574948914529.7633735450328496.10278772574895
6594.1774530313412479.6872437161541707.4864473967361299.64885585576053
7290.53444813127476202.80516174675523255.712635683748721331.9477544382094
8282.0370473183119221.85294041580795223.904243952066761353.2057683137991
9162.868670349414151619.2260202016191222.7839259192768476.12138352966903
10208.6801128726763669.6659486867103352.9832653047999849.6706731358073
111286.1693450768125188.63760223889088504.9312080246656101.26184465961872
12118.2153058915748968.438004508940311846.654556299661447.6921332997975
131544.241468601316224.01478849514342186.98043171605383125.76331118746903
141566.508193918667899.65095058987866292.09906037919734122.74179511223859

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation

ABF2#MA0266.1-60.002153181.0249117AGAAAGTTCTAGAACTCTAGA+
MGA1#MA0336.1-20.006136972.9212112AGAAAGTTCTAGAAAGGACTATAGAACACTCTAAA+
YER184C#MA0424.1-60.009388834.4690818AGAAAGTTCTAGAACTCCGGAA+
Cebpa#MA0102.1-20.01012594.81994112AGAAAGTTCTAGAAGAGATTGCGAAA-
sd#MA0243.1-10.01055455.02394112AGAAAGTTCTAGAAGACATTCCTCGA+
ARO80#MA0273.110.01882568.96099114AGAAAGTTCTAGAAGATAATTCTCGGCAAGTATGT+
Stat3#MA0144.1-60.02022999.6294318AGAAAGTTCTAGAATTCCAGGAAG+