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MacroAPE 1083:CNhs11725 bu f2: Difference between revisions

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(Created page with "{{Macroape_1083 |PWM=PO;A;C;G;T!1;1025.497325202485;220.9122365366468;1049.5779241005016;516.3691385641911!2;444.870595475589;1342.0506606801785;801.2397059008439;224.1956623...")
 
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774052!10534-107G3;0.0472276!10429-106D6;0.0436992!10464-106H5;0.118104!10827-111C8;0.173148!10789-110H6;0.0945757!10828-111C9;0.0725844!10788-110H5;0.0504815!10792-110H9;0.0819908!10765-110E9;0.0391844!10829-111D1;0.0721552!10830-111D2;0.0544237!10831-111D3;0.0743327!10832-111D4;0.0776985!10833-111D5;0.0808047!10764-110E8;0.0741316!10770-110F5;0.0699579!10399-106A3;0.0903757!10400-106A4;0.0308643!10405-106A9;0.0413612!10834-111D6;0.0258292!10835-111D7;0.0203752!10836-111D8;0.0240993!10837-111D9;0.104523!10699-109G6;0.0976831!10802-111A1;0.0549859!10796-110I4;0.150331!10010-101C1;0.0044156!10810-111A9;0.00277299!10421-106C7;0.00940024!10708-109H6;0.257197!12235-129G3;0.00829201!12236-129G4;0.879604!12237-129G5;0.184538!10167-103B5;0.958125!10151-102I7;0.00867496!10428-106D5;0.0114267!10795-110I3;0.648811!10805-111A4;0.057655!10052-101G7;0.00683304!10189-103D9;0.0208096!10589-108D4;0.00905078!10425-106D2;0.459776!10427-106D4;0.357747!10702-109G9;0.23858!10432-106D9;0.0632176!10496-107C1;0.0070771!10718-109I7;0.00228183!10011-101C2;0.0635652!10053-101G8;0.0247925!10686-109F2;0.80443!10084-102B3;0.602318!10012-101C3;0.00737504!10085-102B4;0.0103232!10482-107A5;0.029688!10419-106C5;0.00634088!10080-102A8;0.00110057!10760-110E4;0.0244859!10709-109H7;0.00397241!10710-109H8;0.00124238!10703-109H1;0.014641!10719-109I8;0.7014!10642-109A3;0.48643!10177-103C6;0.41933!10164-103B2;0.0185677!10173-103C2;0.0158414!10166-103B4;0.00755298!10083-102B2;0.014314!10188-103D8;0.00499149!10552-107I3;0.00907017!10553-107I4;0.0308244!10013-101C4;0.0371177!10536-107G5;0.1368!10618-108G6;0.821422!10423-106C9;0.014602!10785-110H2;0.0140738!12238-129G6;0.0196849!12239-129G7;0.0769309!12240-129G8;0.568951!10416-106C2;0.00351399!10801-110I9;0.273551!10766-110F1;0.0588404!10824-111C5;0.0978279!10825-111C6;0.0425484!10826-111C7;0.0425812!10454-106G4;0.0417123!10409-106B4;0.0362868!10638-108I8;0.0828335!10636-108I6;0.00299528!10513-107D9;0.00260238!10420-106C6;0.0143081!10082-102B1;0.0226359!10014-101C5;0.0812331!10070-101I7;0.0221931!10452-106G2;0.050845!10453-106G3;0.418111!10449-106F8;0.321929!10042-101F6;0.304382!10069-101I6;0.00712088!10193-103E4;0.0520762!10631-108I1;0.011255!10438-106E6;0.065684!10488-107B2;0.0221441!10196-103E7;0.0127317!10071-101I8;0.0453999!10071-101I8;0.0377092!10041-101F5;0.0741734!10451-106G1;0.00191146!10450-106F9;0.0708695!10604-108F1;0.00467956!10605-108F2;0.00189684!10606-108F3;0.00326842!10603-108E9;0.00694618!10497-107C2;0.00721743!10448-106F7;0.00277084!10643-109A4;0.00713936!10426-106D3;0.00468449!10431-106D8;0.000648235!10197-103E8;0.0193908!10443-106F2;0.0379512!10815-111B5;0.00460778!10816-111B6;0.0424839!10817-111B7;0.0455753!10015-101C6;0.0289597!10410-106B5;0.0919258!10054-101G9;0.075933!10758-110E2;0.0585007!10711-109H9;0.163725!10040-101F4;0.0259335!10470-106I2;0.00866623!10415-106C1;0.00250838!10198-103E9;0.00408676!10614-108G2;0.0445758!10612-108F9;0.00439398!10549-107H9;0.000127563!10615-108G3;0.000630881!10487-107B1;0.654379!10433-106E1;0.0154494!10688-109F4;0.0115693!10444-106F3;0.00256972!10444-106F3;0.0101958!10485-107A8;0.0146087!10413-106B8;0.0204701!10175-103C4;0.012082!10161-103A8;0.00927981!12131-128D7;0.00742404!10624-108H3;0.172639!10712-109I1;0.379075!10205-103F7;0.336109!10206-103F8;0.0157114!10207-103F9;0.0157359!10050-101G5;0.00214814!10051-101G6;0.28084!10016-101C7;0.0208051!10046-101G1;0.0241792!10778-110G4;0.0383742!10633-108I3;0.115523!10818-111B8;0.026177!10819-111B9;0.0436695!10820-111C1;0.0474322!10484-107A7;0.0477548!10808-111A7;0.00155023!10169-103B7;0.0543212!10153-102I9;0.00668194!13425-144D5;0.00937635!13433-144E4;0.0947435!13437-144E8;0.170544!11904-125F5;0.163191!11905-125F6;0.659623!10039-101F3;0.43546!10791-110H8;0.0110228!10017-101C8;0.00338657!10045-101F9;0.0334949!10509-107D5;0.195416!10839-111E2;0.0295426!10692-109F8;0.00383215!10079-102A7;0.0323589!10078-102A6;0.00984224!10721-110A1;0.0126633!10569-108B2;0.00154587!10570-108B3;0.301926!10571-108B4;0.416821!10647-109A8;0.437699!10752-110D5;0.00712457!10782-110G8;0.0665225!10726-110A6;0.956412!10018-101C9;0.089316!10086-102B5;0.0072074!10182-103D2;0.0746839!10165-103B3;0.0102088!10499-107C4;0.00755349!10408-106B3;8.34073e-05!10019-101D1;0.00259188!10068-101I5;0.0590465!10075-102A3;0.0759554!10077-102A5;0.0529051!10727-110A7;0.0554594!10775-110G1;0.177685!10412-106B7;0.0810004!12231-129F8;0.0031394!12232-129F9;0.0246699!12233-129G1;0.00751316!12234-129G2;0.0124273!10414-106B9;0.0590859!10170-103B8;0.00116233!10183-103D3;0.012918!10150-102I6;0.0108574!10174-103C3;0.0121072!10155-103A2;0.0139802!10038-101F2;0.0126052!10838-111E1;0.00783901!10759-110E3;0.188621!10514-107E1;0.00856325!10465-106H6;0.0429408!10691-109F7;0.202163!10843-111E6;0.0414682!10844-111E7;0.132817!11747-123G1;0.498638!11748-123G2;0.684809!11749-123G3;0.714263!11750-123G4;0.415712!11751-123G5;0.333406!11840-124H4;0.194609!11752-123G6;0.228342!11753-123G7;0.721489!11754-123G8;0.41249!11755-123G9;0.898827!11756-123H1;0.693359!11833-124G6;0.591847!11760-123H5;0.527384!11836-124G9;0.662806!11758-123H3;0.907357!11835-124G8;0.430197!11762-123H7;0.4018!11838-124H2;0.490777!11757-123H2;0.210647!11759-123H4;0.946572!11761-123H6;0.776785!11842-124H6;0.999193!11837-124H1;0.1086!10568-108B1;0.572585!13230-141I8;0.704978!13231-141I9;0.17096!10696-109G3;0.229119!10493-107B7;0.427558!10494-107B8;0.00726987!10850-111F4;0.0104379!10851-111F5;0.0896899!10852-111F6;0.0812227!10853-111F7;0.111377!10854-111F8;0.0430006!10855-111F9;0.0283223!10856-111G1;0.404578!10847-111F1;0.297396!10846-111E9;0.0399411!10848-111F2;0.0251207!10845-111E8;0.0294791!10857-111G2;0.000297416!10858-111G3;0.00544358!10156-103A3;0.188513!11901-125F2;0.00976345!11902-125F3;0.760397!11903-125F4;0.486925!10689-109F5;0.921753!10648-109A9;0.000185713!10784-110H1;0.0771372!10744-110C6;0.00202352!10772-110F7;0.785226!10474-106I6;0.00696788!10600-108E6;0.450965!10684-109E9;0.0384414!12226-129F3;0.0773833!12227-129F4;0.0174047!10508-107D4;0.514616!10539-107G8;0.961293!10607-108F4;0.425593!10555-107I6;0.127507!10774-110F9;0.836558!10637-108I7;0.0276833!10663-109C6;0.455302!10728-110A8;0.324794!10729-110A9;0.0216055!10430-106D7;0.203875!10730-110B1;0.174577!10813-111B3;0.531556!10812-111B2;0.409192!10037-101F1;0.751077!10172-103C1;0.0127723!10163-103B1;0.0108517!10076-102A4;0.010988!10073-102A1;0.0107284!10036-101E9;0.0989003!10195-103E6;0.0132848!10277-104E7;0.0145345!10434-106E2;0.00349592!10550-107I1;0.000296567!10545-107H5;0.0113197!10544-107H4;0.00444252!10704-109H2;0.0140933!10510-107D6;0.155223!10558-107I9;0.00174065!10020-101D2;0.00516004!10732-110B3;0.027954!10049-101G4;0.195758!10698-109G5;0.116999!10437-106E5;0.0395975!10417-106C3;0.225995!10035-101E8;0.000579594!10171-103B9;0.00947797!10157-103A4;0.00974458!10034-101E7;0.0117071!10072-101I9;0.00929772!10199-103F1;0.104318!10200-103F2;0.0869145!10697-109G4;0.087848!10723-110A3;0.348316!10179-103C8;0.0408167!10160-103A7;0.00781206!10180-103C9;0.013049!10162-103A9;0.00643394!10021-101D3;0.0203437!10840-111E3;0.0547818!10706-109H4;0.0862117!10033-101E6;0.169495!10032-101E5;0.00706718!10490-107B4;0.0105172!10439-106E7;0.00143206!10022-101D4;0.00179964!10176-103C5;0.0459105!10469-106I1;0.0157514!10067-101I4;0.00125276!10411-106B6;0.0355728!10471-106I3;0.176535!10030-101E3;0.0578598!10475-106I7;0.0239565!10787-110H4;0.0730488!10477-106I9;0.00123097!10695-109G2;0.0712562!11771-123I7;0.488492!11772-123I8;0.0142555!11773-123I9;0.501631!10093-102C3;0.305538!10442-106F1;0.0467197!10442-106F1;0.0322988!10201-103F3;0.0573807!10639-108I9;0.0325268!11843-124H7;0.00921524!11841-124H5;0.01765!10693-109F9;0.000977316!10436-106E4;0.01481!10483-107A6;0.0178541!10282-104F3;0.000621704!10023-101D5;0.0167791!10066-101I3;0.0226269!10065-101I2;0.0248451!10800-110I8;0.116607!10610-108F7;0.119591!10841-111E4;0.571256!10541-107H1;0.0375195!10842-111E5;0.00605389!10562-108A4;0.291876!10024-101D6;0.649702!10064-101I1;0.010024!10609-108F6;0.038337!10048-101G3;0.49266!10781-110G7;0.00616618!10181-103D1;0.550973!10159-103A6;0.00464902!10056-101H2;0.00325178!10737-110B8;0.0258201!10025-101D7;0.339547!10044-101F8;0.0252524!10424-106D1;0.005482!10463-106H4;0.157725!10616-108G4;0.0060636!10486-107A9;0.0576453!10062-101H8;0.0366021!10202-103F4;0.0397632!10158-103A5;0.0372764!10441-106E9;0.00272915!10031-101E4;0.0274421!10063-101H9;0.0128004!10063-101H9;0.0999217!11763-123H8;0.017682!11765-123I1;0.273734!11768-123I4;0.0808148!10807-111A6;0.162017!10790-110H7;0.000292986!10798-110I6;0.0034686!10786-110H3;0.051206!10591-108D6;0.031295!10593-108D8;0.00352302!10590-108D5;0.00762!10026-101D8;0.0237724!10096-102C6;0.196036!10168-103B6;0.955686!10154-103A1;0.00822333!10209-103G2;0.00944176!10061-101H7;0.141084!10027-101D9;0.0935463!10043-101F7;0.994438!10783-110G9;0.134585!10028-101E1;0.0511661!10060-101H6;0.053355!10203-103F5;0.0558241!10059-101H5;0.174196!10047-101G2;0.190061!10029-101E2;0.139506!10058-101H4;0.0919169!10418-106C4;0.0917839!10492-107B6;0.000977087!10694-109G1;0.0133259!10797-110I5;0.337315!10057-101H3;0.00156863!10100-102D1;0.088656!10055-101H1;0.044364!10204-103F6;0.268611!10191-103E2;0.0232216!10563-108A5;0.00360136
|name=CNhs11725_bu_f2
|name=CNhs11725_bu_f2
|tomtom_result=Trl#MA0205.1;1;0.000488932;0.232732;0.465464;9;GCACAGCAA;GAGAGAGCAA;-!REST#MA0138.2;10;0.00370975;1.76584;1;9;GCACAGCAA;TCAGCACCATGGACAGCGC;-!REST#MA0138.2;11;0.00705015;3.35587;1;9;GCACAGCAA;TTCAGCACCATGGACAGCGCC;+!GAL4#MA0299.1;4;0.0125825;5.98928;1;9;GCACAGCAA;CGGGGAACAGTACTC;+!BAS1#MA0278.1;0;0.0127291;6.05904;1;9;GCACAGCAA;GCACAGCCAGAGTCAAGTCAA;+!CRZ1#MA0285.1;-1;0.0130392;6.20667;1;8;GCACAGCAA;CTAAGCCAC;+!Dof2#MA0020.1;-2;0.0150384;7.1583;1;6;GCACAGCAA;AAAGCA;+!NFE2L2#MA0150.1;3;0.0162732;7.74604;1;8;GCACAGCAA;ATGACTCAGCA;+!ACE2#MA0267.1;-1;0.0167881;7.99113;1;7;GCACAGCAA;ACCAGCA;+!FOXA1#MA0148.1;-1;0.0172127;8.19326;1;8;GCACAGCAA;CAAAGTAAACA;-!SPIB#MA0081.1;-2;0.0177837;8.46502;1;7;GCACAGCAA;AGAGGAA;+
}}
}}

Latest revision as of 14:32, 7 September 2012

Full Name: CNhs11725_bu_f2

Motif matrix
POACGT
11025.497325202485220.91223653664681049.5779241005016516.3691385641911
2444.8705954755891342.0506606801785801.2397059008439224.19566234721367
32466.092898049010324.58189732019767251.2727498289992870.40907920561624
411.2856748499535481657.82413642499731133.7171898852159.52962324365936
52806.64382362932970.00.05.712800774494621
615.2011751635706910.3151391692092252777.26076398781929.579546083226017
7155.705154544046051854.8827080735084727.497391821828774.27136996443825
81131.9762546634647454.407325112292517.7024479255899708.2705967024799
91430.256196087765527.2659576039576499.8565575349519354.9779131771493

Sample specificity

The values shown are the p-values of the motif in FANTOM5 samples. <br>Analyst: Michiel de Hoon


TomTom analysis

<br>Analyst: Michiel de Hoon and Hiroko Ohmiya


Target_ID

Optimal_offset

p-value

E-value

q-value

Overlap

Query
consensus
Target
consensus

Orientation
Trl#MA0205.110.0004889320.2327320.4654649GCACAGCAAGAGAGAGCAA-
REST#MA0138.2100.003709751.7658419GCACAGCAATCAGCACCATGGACAGCGC-
REST#MA0138.2110.007050153.3558719GCACAGCAATTCAGCACCATGGACAGCGCC+
GAL4#MA0299.140.01258255.9892819GCACAGCAACGGGGAACAGTACTC+
BAS1#MA0278.100.01272916.0590419GCACAGCAAGCACAGCCAGAGTCAAGTCAA+
CRZ1#MA0285.1-10.01303926.2066718GCACAGCAACTAAGCCAC+
Dof2#MA0020.1-20.01503847.158316GCACAGCAAAAAGCA+
NFE2L2#MA0150.130.01627327.7460418GCACAGCAAATGACTCAGCA+
ACE2#MA0267.1-10.01678817.9911317GCACAGCAAACCAGCA+
FOXA1#MA0148.1-10.01721278.1932618GCACAGCAACAAAGTAAACA-
SPIB#MA0081.1-20.01778378.4650217GCACAGCAAAGAGGAA+
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