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MCL coexpression mm9:110: Difference between revisions

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|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0570741246689917,0,0,0,0,0,0,0,0,0,0,0.196153902644494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456960520238567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1587130573671,0,0,0.0445418537893845,0.0824580172145032,0.24573158740015,0.439843518889665,0.423748563837555,1.30045302167962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|coexpression_dpi_cluster_scores_median=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0570741246689917,0,0,0,0,0,0,0,0,0,0,0.196153902644494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.456960520238567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1587130573671,0,0,0.0445418537893845,0.0824580172145032,0.24573158740015,0.439843518889665,0.423748563837555,1.30045302167962,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|gostat_on_MCL_coexpression=GO:0006811;ion transport;0.000701743850737937;209195,11944,20535,246133,110895,14603,16517!GO:0022857;transmembrane transporter activity;0.00113329059201128;209195,11944,20535,246133,110895,14603,16517!GO:0015075;ion transmembrane transporter activity;0.00176454111586569;209195,11944,20535,246133,14603,16517!GO:0030001;metal ion transport;0.00184956609549029;11944,246133,110895,14603,16517!GO:0022891;substrate-specific transmembrane transporter activity;0.00233612949469922;209195,11944,20535,246133,14603,16517!GO:0006812;cation transport;0.00251675989128272;11944,246133,110895,14603,16517!GO:0004198;calcium-dependent cysteine-type endopeptidase activity;0.00251675989128272;381122,23830!GO:0015672;monovalent inorganic cation transport;0.0040605216521477;11944,246133,110895,16517!GO:0030955;potassium ion binding;0.0040605216521477;11944,246133,16517!GO:0022892;substrate-specific transporter activity;0.00434126924543376;209195,11944,20535,246133,14603,16517!GO:0006813;potassium ion transport;0.00875827746623056;11944,246133,16517!GO:0022832;voltage-gated channel activity;0.00956458177064376;209195,246133,16517!GO:0005244;voltage-gated ion channel activity;0.00956458177064376;209195,246133,16517!GO:0015297;antiporter activity;0.00957760454201461;20535,110895!GO:0031420;alkali metal ion binding;0.00981471050896882;11944,246133,16517!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0116338651825163;18104!GO:0004276;furin activity;0.0116338651825163;18550!GO:0008324;cation transmembrane transporter activity;0.0116727456090333;11944,246133,14603,16517!GO:0008900;hydrogen:potassium-exchanging ATPase activity;0.0188264938632633;11944!GO:0043206;fibril organization and biogenesis;0.0188264938632633;17833!GO:0015889;cobalamin transport;0.0188264938632633;14603!GO:0022836;gated channel activity;0.0199736596085369;209195,246133,16517!GO:0046873;metal ion transmembrane transporter activity;0.0225434404746776;246133,14603,16517!GO:0015087;cobalt ion transmembrane transporter activity;0.0225434404746776;14603!GO:0006508;proteolysis;0.0225434404746776;18550,619326,381122,23830!GO:0016787;hydrolase activity;0.0225434404746776;11944,18550,619326,57319,70166,381122,23830!GO:0005249;voltage-gated potassium channel activity;0.0225434404746776;246133,16517!GO:0004197;cysteine-type endopeptidase activity;0.0225434404746776;381122,23830!GO:0022804;active transmembrane transporter activity;0.0246854152654115;11944,20535,110895!GO:0051180;vitamin transport;0.0246854152654115;14603!GO:0006824;cobalt ion transport;0.0246854152654115;14603!GO:0004090;carbonyl reductase (NADPH) activity;0.0246854152654115;109857!GO:0008233;peptidase activity;0.0249026394601886;18550,619326,381122,23830!GO:0043167;ion binding;0.0274147196029471;209195,11944,18550,619326,26359,16517,246133,381122,14603!GO:0005216;ion channel activity;0.0274147196029471;209195,246133,16517!GO:0031419;cobalamin binding;0.0274147196029471;14603!GO:0022838;substrate specific channel activity;0.0284210641330589;209195,246133,16517!GO:0006810;transport;0.0284210641330589;209195,11944,20535,246133,110895,14603,16517!GO:0008509;anion transmembrane transporter activity;0.0284210641330589;209195,20535!GO:0043205;fibril;0.0284210641330589;17833!GO:0022843;voltage-gated cation channel activity;0.0284210641330589;246133,16517!GO:0022803;passive transmembrane transporter activity;0.0284210641330589;209195,246133,16517!GO:0015267;channel activity;0.0284210641330589;209195,246133,16517!GO:0051234;establishment of localization;0.0287062868740622;209195,11944,20535,246133,110895,14603,16517!GO:0005267;potassium channel activity;0.0296987151777888;246133,16517!GO:0022890;inorganic cation transmembrane transporter activity;0.0328490534452536;11944,14603!GO:0012510;trans-Golgi network transport vesicle membrane;0.0328490534452536;18550!GO:0005452;inorganic anion exchanger activity;0.0328490534452536;20535!GO:0005887;integral to plasma membrane;0.0336443462931283;20535,57276,110895,16517!GO:0004175;endopeptidase activity;0.0336443462931283;18550,381122,23830!GO:0031226;intrinsic to plasma membrane;0.0341669082464488;20535,57276,110895,16517!GO:0043169;cation binding;0.0360019187842886;11944,246133,18550,619326,26359,14603,381122,16517!GO:0015380;anion exchanger activity;0.0366921226086729;20535!GO:0008234;cysteine-type peptidase activity;0.0366921226086729;381122,23830!GO:0015106;bicarbonate transmembrane transporter activity;0.0366921226086729;20535!GO:0030660;Golgi-associated vesicle membrane;0.0366921226086729;18550!GO:0030658;transport vesicle membrane;0.0366921226086729;18550!GO:0050897;cobalt ion binding;0.0366921226086729;14603!GO:0015301;anion:anion antiporter activity;0.0366921226086729;20535!GO:0015108;chloride transmembrane transporter activity;0.0386963182311876;20535!GO:0030140;trans-Golgi network transport vesicle;0.0386963182311876;18550!GO:0006820;anion transport;0.0387991725533378;209195,20535!GO:0051179;localization;0.0387991725533378;209195,11944,20535,246133,110895,14603,16517!GO:0015291;secondary active transmembrane transporter activity;0.0416844967010831;20535,110895!GO:0005242;inward rectifier potassium channel activity;0.0416844967010831;16517!GO:0004289;subtilase activity;0.0416844967010831;18550!GO:0005247;voltage-gated chloride channel activity;0.0426991062891871;209195!GO:0022844;voltage-gated anion channel activity;0.0426991062891871;209195!GO:0030665;clathrin coated vesicle membrane;0.0426991062891871;18550!GO:0046872;metal ion binding;0.0436751196297037;11944,246133,18550,619326,26359,14603,381122,16517!GO:0030133;transport vesicle;0.0497220931029031;18550!
|gostat_on_MCL_coexpression=GO:0006811;ion transport;0.000701743850737937;209195,11944,20535,246133,110895,14603,16517!GO:0022857;transmembrane transporter activity;0.00113329059201128;209195,11944,20535,246133,110895,14603,16517!GO:0015075;ion transmembrane transporter activity;0.00176454111586569;209195,11944,20535,246133,14603,16517!GO:0030001;metal ion transport;0.00184956609549029;11944,246133,110895,14603,16517!GO:0022891;substrate-specific transmembrane transporter activity;0.00233612949469922;209195,11944,20535,246133,14603,16517!GO:0006812;cation transport;0.00251675989128272;11944,246133,110895,14603,16517!GO:0004198;calcium-dependent cysteine-type endopeptidase activity;0.00251675989128272;381122,23830!GO:0015672;monovalent inorganic cation transport;0.0040605216521477;11944,246133,110895,16517!GO:0030955;potassium ion binding;0.0040605216521477;11944,246133,16517!GO:0022892;substrate-specific transporter activity;0.00434126924543376;209195,11944,20535,246133,14603,16517!GO:0006813;potassium ion transport;0.00875827746623056;11944,246133,16517!GO:0022832;voltage-gated channel activity;0.00956458177064376;209195,246133,16517!GO:0005244;voltage-gated ion channel activity;0.00956458177064376;209195,246133,16517!GO:0015297;antiporter activity;0.00957760454201461;20535,110895!GO:0031420;alkali metal ion binding;0.00981471050896882;11944,246133,16517!GO:0003955;NAD(P)H dehydrogenase (quinone) activity;0.0116338651825163;18104!GO:0004276;furin activity;0.0116338651825163;18550!GO:0008324;cation transmembrane transporter activity;0.0116727456090333;11944,246133,14603,16517!GO:0008900;hydrogen:potassium-exchanging ATPase activity;0.0188264938632633;11944!GO:0043206;fibril organization and biogenesis;0.0188264938632633;17833!GO:0015889;cobalamin transport;0.0188264938632633;14603!GO:0022836;gated channel activity;0.0199736596085369;209195,246133,16517!GO:0046873;metal ion transmembrane transporter activity;0.0225434404746776;246133,14603,16517!GO:0015087;cobalt ion transmembrane transporter activity;0.0225434404746776;14603!GO:0006508;proteolysis;0.0225434404746776;18550,619326,381122,23830!GO:0016787;hydrolase activity;0.0225434404746776;11944,18550,619326,57319,70166,381122,23830!GO:0005249;voltage-gated potassium channel activity;0.0225434404746776;246133,16517!GO:0004197;cysteine-type endopeptidase activity;0.0225434404746776;381122,23830!GO:0022804;active transmembrane transporter activity;0.0246854152654115;11944,20535,110895!GO:0051180;vitamin transport;0.0246854152654115;14603!GO:0006824;cobalt ion transport;0.0246854152654115;14603!GO:0004090;carbonyl reductase (NADPH) activity;0.0246854152654115;109857!GO:0008233;peptidase activity;0.0249026394601886;18550,619326,381122,23830!GO:0043167;ion binding;0.0274147196029471;209195,11944,18550,619326,26359,16517,246133,381122,14603!GO:0005216;ion channel activity;0.0274147196029471;209195,246133,16517!GO:0031419;cobalamin binding;0.0274147196029471;14603!GO:0022838;substrate specific channel activity;0.0284210641330589;209195,246133,16517!GO:0006810;transport;0.0284210641330589;209195,11944,20535,246133,110895,14603,16517!GO:0008509;anion transmembrane transporter activity;0.0284210641330589;209195,20535!GO:0043205;fibril;0.0284210641330589;17833!GO:0022843;voltage-gated cation channel activity;0.0284210641330589;246133,16517!GO:0022803;passive transmembrane transporter activity;0.0284210641330589;209195,246133,16517!GO:0015267;channel activity;0.0284210641330589;209195,246133,16517!GO:0051234;establishment of localization;0.0287062868740622;209195,11944,20535,246133,110895,14603,16517!GO:0005267;potassium channel activity;0.0296987151777888;246133,16517!GO:0022890;inorganic cation transmembrane transporter activity;0.0328490534452536;11944,14603!GO:0012510;trans-Golgi network transport vesicle membrane;0.0328490534452536;18550!GO:0005452;inorganic anion exchanger activity;0.0328490534452536;20535!GO:0005887;integral to plasma membrane;0.0336443462931283;20535,57276,110895,16517!GO:0004175;endopeptidase activity;0.0336443462931283;18550,381122,23830!GO:0031226;intrinsic to plasma membrane;0.0341669082464488;20535,57276,110895,16517!GO:0043169;cation binding;0.0360019187842886;11944,246133,18550,619326,26359,14603,381122,16517!GO:0015380;anion exchanger activity;0.0366921226086729;20535!GO:0008234;cysteine-type peptidase activity;0.0366921226086729;381122,23830!GO:0015106;bicarbonate transmembrane transporter activity;0.0366921226086729;20535!GO:0030660;Golgi-associated vesicle membrane;0.0366921226086729;18550!GO:0030658;transport vesicle membrane;0.0366921226086729;18550!GO:0050897;cobalt ion binding;0.0366921226086729;14603!GO:0015301;anion:anion antiporter activity;0.0366921226086729;20535!GO:0015108;chloride transmembrane transporter activity;0.0386963182311876;20535!GO:0030140;trans-Golgi network transport vesicle;0.0386963182311876;18550!GO:0006820;anion transport;0.0387991725533378;209195,20535!GO:0051179;localization;0.0387991725533378;209195,11944,20535,246133,110895,14603,16517!GO:0015291;secondary active transmembrane transporter activity;0.0416844967010831;20535,110895!GO:0005242;inward rectifier potassium channel activity;0.0416844967010831;16517!GO:0004289;subtilase activity;0.0416844967010831;18550!GO:0005247;voltage-gated chloride channel activity;0.0426991062891871;209195!GO:0022844;voltage-gated anion channel activity;0.0426991062891871;209195!GO:0030665;clathrin coated vesicle membrane;0.0426991062891871;18550!GO:0046872;metal ion binding;0.0436751196297037;11944,246133,18550,619326,26359,14603,381122,16517!GO:0030133;transport vesicle;0.0497220931029031;18550!
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000945!1.07e-26!16;UBERON:0010039!1.07e-26!16;UBERON:0005409!1.12e-11!47;UBERON:0001153!2.48e-10!1;UBERON:0001045!2.48e-10!1
}}
}}

Revision as of 16:20, 11 October 2012


Phase1 CAGE Peaks

 Short description
Mm9::chr10:106386258..106386264,+p@chr10:106386258..106386264
+
Mm9::chr10:126586428..126586436,+p@chr10:126586428..126586436
+
Mm9::chr10:57514176..57514196,+p4@Smpdl3a
Mm9::chr10:80334545..80334569,+p@chr10:80334545..80334569
+
Mm9::chr10:80334581..80334597,+p@chr10:80334581..80334597
+
Mm9::chr11:103196622..103196638,-p@chr11:103196622..103196638
-
Mm9::chr11:110858368..110858376,+p9@Kcnj16
Mm9::chr12:99766911..99766918,-p@chr12:99766911..99766918
-
Mm9::chr13:97241134..97241145,-p3@Ankdd1b
Mm9::chr13:97241169..97241179,-p2@Ankdd1b
Mm9::chr14:26507248..26507259,-p@chr14:26507248..26507259
-
Mm9::chr15:58359880..58359892,+p@chr15:58359880..58359892
+
Mm9::chr15:74547065..74547098,-p@chr15:74547065..74547098
-
Mm9::chr15:74547104..74547129,-p@chr15:74547104..74547129
-
Mm9::chr15:74547135..74547149,+p@chr15:74547135..74547149
+
Mm9::chr16:43807510..43807513,+p@chr16:43807510..43807513
+
Mm9::chr16:44333248..44333270,-p3@Sidt1
Mm9::chr16:92292625..92292642,+p2@Kcne2
Mm9::chr16:92292643..92292656,+p3@Kcne2
Mm9::chr16:92498330..92498339,+p3@Clic6
Mm9::chr16:92498358..92498363,+p4@Clic6
Mm9::chr16:92498367..92498420,+p1@Clic6
Mm9::chr16:92498455..92498464,+p2@Clic6
Mm9::chr16:93683474..93683494,+p2@Cbr3
Mm9::chr17:47865745..47865750,-p@chr17:47865745..47865750
-
Mm9::chr17:47865766..47865802,-p@chr17:47865766..47865802
-
Mm9::chr17:47865805..47865814,-p@chr17:47865805..47865814
-
Mm9::chr17:47865824..47865857,-p@chr17:47865824..47865857
-
Mm9::chr17:47866227..47866230,-p@chr17:47866227..47866230
-
Mm9::chr17:47867070..47867076,-p@chr17:47867070..47867076
-
Mm9::chr17:47867083..47867110,-p@chr17:47867083..47867110
-
Mm9::chr17:47867578..47867581,-p@chr17:47867578..47867581
-
Mm9::chr17:47867609..47867618,-p@chr17:47867609..47867618
-
Mm9::chr17:47867696..47867715,+p@chr17:47867696..47867715
+
Mm9::chr17:47867699..47867712,-p@chr17:47867699..47867712
-
Mm9::chr17:47869376..47869387,-p@chr17:47869376..47869387
-
Mm9::chr17:47869395..47869409,-p@chr17:47869395..47869409
-
Mm9::chr17:47869411..47869423,-p@chr17:47869411..47869423
-
Mm9::chr17:47869428..47869437,-p@chr17:47869428..47869437
-
Mm9::chr17:47869447..47869455,-p@chr17:47869447..47869455
-
Mm9::chr17:47869976..47869999,-p@chr17:47869976..47869999
-
Mm9::chr17:47870004..47870026,-p@chr17:47870004..47870026
-
Mm9::chr17:47870035..47870059,-p@chr17:47870035..47870059
-
Mm9::chr17:47870747..47870759,-p@chr17:47870747..47870759
-
Mm9::chr17:47870785..47870811,-p@chr17:47870785..47870811
-
Mm9::chr17:47871263..47871277,-p@chr17:47871263..47871277
-
Mm9::chr17:47871293..47871313,-p@chr17:47871293..47871313
-
Mm9::chr17:73748629..73748642,-p1@Capn13
Mm9::chr18:10921951..10921956,+p@chr18:10921951..10921956
+
Mm9::chr19:11822038..11822071,+p1@Gif
Mm9::chr19:11822073..11822094,+p2@Gif
Mm9::chr19:11822943..11822970,+p@chr19:11822943..11822970
+
Mm9::chr19:11824483..11824486,+p@chr19:11824483..11824486
+
Mm9::chr19:11824743..11824753,+p@chr19:11824743..11824753
+
Mm9::chr19:11830273..11830301,+p@chr19:11830273..11830301
+
Mm9::chr19:11833497..11833536,-p@chr19:11833497..11833536
-
Mm9::chr19:34142015..34142024,+p3@Lipn
Mm9::chr1:108895165..108895178,+p@chr1:108895165..108895178
+
Mm9::chr1:123256440..123256453,-p@chr1:123256440..123256453
-
Mm9::chr1:133870870..133870918,+p@chr1:133870870..133870918
+
Mm9::chr1:182981363..182981373,+p2@9130409I23Rik
Mm9::chr1:182981380..182981397,+p1@9130409I23Rik
Mm9::chr1:184495125..184495141,+p1@Capn8
Mm9::chr1:189767199..189767210,+p@chr1:189767199..189767210
+
Mm9::chr1:40636913..40636937,+p2@Slc9a4
Mm9::chr1:40637316..40637326,+p4@Slc9a4
Mm9::chr1:40637337..40637355,+p1@Slc9a4
Mm9::chr1:53944580..53944590,-p@chr1:53944580..53944590
-
Mm9::chr1:59019401..59019405,-p@chr1:59019401..59019405
-
Mm9::chr1:93202748..93202751,+p@chr1:93202748..93202751
+
Mm9::chr2:70922226..70922237,+p@chr2:70922226..70922237
+
Mm9::chr2:85376824..85376852,-p@chr2:85376824..85376852
-
Mm9::chr3:10301298..10301310,-p3@Fabp12
Mm9::chr3:53361478..53361493,-p@chr3:53361478..53361493
-
Mm9::chr3:69662792..69662796,-p@chr3:69662792..69662796
-
Mm9::chr4:148038458..148038465,+p@chr4:148038458..148038465
+
Mm9::chr5:115924557..115924577,-p@chr5:115924557..115924577
-
Mm9::chr5:115924599..115924609,-p@chr5:115924599..115924609
-
Mm9::chr5:115924650..115924679,-p@chr5:115924650..115924679
-
Mm9::chr5:124143487..124143490,-p@chr5:124143487..124143490
-
Mm9::chr5:135827769..135827797,+p@chr5:135827769..135827797
+
Mm9::chr5:23934578..23934590,+p10@Slc4a2
Mm9::chr5:23936536..23936547,+p@chr5:23936536..23936547
+
Mm9::chr5:23936589..23936597,+p@chr5:23936589..23936597
+
Mm9::chr5:30927839..30927879,-p@chr5:30927839..30927879
-
Mm9::chr6:115434503..115434506,-p@chr6:115434503..115434506
-
Mm9::chr6:14704590..14704600,-p@chr6:14704590..14704600
-
Mm9::chr6:87297060..87297065,+p@chr6:87297060..87297065
+
Mm9::chr6:87328231..87328269,-p@chr6:87328231..87328269
-
Mm9::chr7:148974866..148974884,+p1@Muc5ac
Mm9::chr7:152393974..152393991,-p2@1810010D01Rik
Mm9::chr7:152394003..152394034,-p1@1810010D01Rik
Mm9::chr7:31497229..31497246,+p1@Atp4a
Mm9::chr7:31500891..31500912,+p@chr7:31500891..31500912
+
Mm9::chr7:31505300..31505309,+p@chr7:31505300..31505309
+
Mm9::chr7:87548190..87548195,-p16@Furin
Mm9::chr7:87548201..87548225,-p5@Furin
Mm9::chr7:87548256..87548264,-p14@Furin
Mm9::chr7:87550311..87550319,-p2@Furin
Mm9::chr8:109912582..109912585,-p@chr8:109912582..109912585
-
Mm9::chr8:109927097..109927113,-p1@Nqo1
Mm9::chr8:13386643..13386652,+p@chr8:13386643..13386652
+
Mm9::chr8:24278249..24278296,+p@chr8:24278249..24278296
+
Mm9::chr8:37328840..37328853,-p@chr8:37328840..37328853
-
Mm9::chr8:60257144..60257155,-p@chr8:60257144..60257155
-
Mm9::chr8:64601983..64601997,-p2@Anxa10
Mm9::chr8:87223059..87223077,+p@chr8:87223059..87223077
+
Mm9::chr9:37346850..37346864,+p1@Vsig2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0006811ion transport0.000701743850737937
GO:0022857transmembrane transporter activity0.00113329059201128
GO:0015075ion transmembrane transporter activity0.00176454111586569
GO:0030001metal ion transport0.00184956609549029
GO:0022891substrate-specific transmembrane transporter activity0.00233612949469922
GO:0006812cation transport0.00251675989128272
GO:0004198calcium-dependent cysteine-type endopeptidase activity0.00251675989128272
GO:0015672monovalent inorganic cation transport0.0040605216521477
GO:0030955potassium ion binding0.0040605216521477
GO:0022892substrate-specific transporter activity0.00434126924543376
GO:0006813potassium ion transport0.00875827746623056
GO:0022832voltage-gated channel activity0.00956458177064376
GO:0005244voltage-gated ion channel activity0.00956458177064376
GO:0015297antiporter activity0.00957760454201461
GO:0031420alkali metal ion binding0.00981471050896882
GO:0003955NAD(P)H dehydrogenase (quinone) activity0.0116338651825163
GO:0004276furin activity0.0116338651825163
GO:0008324cation transmembrane transporter activity0.0116727456090333
GO:0008900hydrogen:potassium-exchanging ATPase activity0.0188264938632633
GO:0043206fibril organization and biogenesis0.0188264938632633
GO:0015889cobalamin transport0.0188264938632633
GO:0022836gated channel activity0.0199736596085369
GO:0046873metal ion transmembrane transporter activity0.0225434404746776
GO:0015087cobalt ion transmembrane transporter activity0.0225434404746776
GO:0006508proteolysis0.0225434404746776
GO:0016787hydrolase activity0.0225434404746776
GO:0005249voltage-gated potassium channel activity0.0225434404746776
GO:0004197cysteine-type endopeptidase activity0.0225434404746776
GO:0022804active transmembrane transporter activity0.0246854152654115
GO:0051180vitamin transport0.0246854152654115
GO:0006824cobalt ion transport0.0246854152654115
GO:0004090carbonyl reductase (NADPH) activity0.0246854152654115
GO:0008233peptidase activity0.0249026394601886
GO:0043167ion binding0.0274147196029471
GO:0005216ion channel activity0.0274147196029471
GO:0031419cobalamin binding0.0274147196029471
GO:0022838substrate specific channel activity0.0284210641330589
GO:0006810transport0.0284210641330589
GO:0008509anion transmembrane transporter activity0.0284210641330589
GO:0043205fibril0.0284210641330589
GO:0022843voltage-gated cation channel activity0.0284210641330589
GO:0022803passive transmembrane transporter activity0.0284210641330589
GO:0015267channel activity0.0284210641330589
GO:0051234establishment of localization0.0287062868740622
GO:0005267potassium channel activity0.0296987151777888
GO:0022890inorganic cation transmembrane transporter activity0.0328490534452536
GO:0012510trans-Golgi network transport vesicle membrane0.0328490534452536
GO:0005452inorganic anion exchanger activity0.0328490534452536
GO:0005887integral to plasma membrane0.0336443462931283
GO:0004175endopeptidase activity0.0336443462931283
GO:0031226intrinsic to plasma membrane0.0341669082464488
GO:0043169cation binding0.0360019187842886
GO:0015380anion exchanger activity0.0366921226086729
GO:0008234cysteine-type peptidase activity0.0366921226086729
GO:0015106bicarbonate transmembrane transporter activity0.0366921226086729
GO:0030660Golgi-associated vesicle membrane0.0366921226086729
GO:0030658transport vesicle membrane0.0366921226086729
GO:0050897cobalt ion binding0.0366921226086729
GO:0015301anion:anion antiporter activity0.0366921226086729
GO:0015108chloride transmembrane transporter activity0.0386963182311876
GO:0030140trans-Golgi network transport vesicle0.0386963182311876
GO:0006820anion transport0.0387991725533378
GO:0051179localization0.0387991725533378
GO:0015291secondary active transmembrane transporter activity0.0416844967010831
GO:0005242inward rectifier potassium channel activity0.0416844967010831
GO:0004289subtilase activity0.0416844967010831
GO:0005247voltage-gated chloride channel activity0.0426991062891871
GO:0022844voltage-gated anion channel activity0.0426991062891871
GO:0030665clathrin coated vesicle membrane0.0426991062891871
GO:0046872metal ion binding0.0436751196297037
GO:0030133transport vesicle0.0497220931029031



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
stomach1.07e-2616
food storage organ1.07e-2616
gastrointestinal system1.12e-1147
caecum2.48e-101
midgut2.48e-101


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}

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