FFCP PHASE1:Mm9::chr15:5058492..5058565,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr15:5058492..5058565,- | |id=chr15:5058492..5058565,- | ||
|ontology_enrichment_celltype=CL:0002320!6.53e-08!46;CL:0000134!6.53e-08!46 | |ontology_enrichment_celltype=CL:0002320!6.53e-08!46;CL:0000134!6.53e-08!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,7.49e-08,46;CL:0000134,7.49e-08,46 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.21e-12!130;UBERON:0000925!2.21e-12!130;UBERON:0006595!2.21e-12!130;UBERON:0001007!2.22e-12!128;UBERON:0001555!2.22e-12!128;UBERON:0007026!2.22e-12!128;UBERON:0004921!9.43e-12!126;UBERON:0004185!9.43e-12!126;UBERON:0000077!5.83e-10!97;UBERON:0000926!1.02e-09!193;UBERON:0004120!1.02e-09!193;UBERON:0006603!1.02e-09!193;UBERON:0001041!2.42e-09!92;UBERON:0003104!5.73e-09!131;UBERON:0009142!5.73e-09!131;UBERON:0002405!1.01e-08!70;UBERON:0000466!5.05e-08!79;UBERON:0002384!6.53e-08!46;UBERON:0009569!4.37e-07!66;UBERON:0002365!5.65e-07!25;UBERON:0002330!5.65e-07!25 | |ontology_enrichment_uberon=UBERON:0004119!2.21e-12!130;UBERON:0000925!2.21e-12!130;UBERON:0006595!2.21e-12!130;UBERON:0001007!2.22e-12!128;UBERON:0001555!2.22e-12!128;UBERON:0007026!2.22e-12!128;UBERON:0004921!9.43e-12!126;UBERON:0004185!9.43e-12!126;UBERON:0000077!5.83e-10!97;UBERON:0000926!1.02e-09!193;UBERON:0004120!1.02e-09!193;UBERON:0006603!1.02e-09!193;UBERON:0001041!2.42e-09!92;UBERON:0003104!5.73e-09!131;UBERON:0009142!5.73e-09!131;UBERON:0002405!1.01e-08!70;UBERON:0000466!5.05e-08!79;UBERON:0002384!6.53e-08!46;UBERON:0009569!4.37e-07!66;UBERON:0002365!5.65e-07!25;UBERON:0002330!5.65e-07!25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001007,3.80e-11,116;UBERON:0001555,3.80e-11,116;UBERON:0007026,3.80e-11,116;UBERON:0004119,3.86e-11,118;UBERON:0000925,3.86e-11,118;UBERON:0006595,3.86e-11,118;UBERON:0004921,1.55e-10,114;UBERON:0001041,1.82e-08,80;UBERON:0002384,7.49e-08,46;UBERON:0002100,1.69e-07,90;UBERON:0005177,1.98e-07,79;UBERON:0002365,5.99e-07,25;UBERON:0002330,5.99e-07,25;UBERON:0009569,8.24e-07,66 | |||
|phase1_expression=3.04282809499109,0.348975407639361,0.454999239389536,3.0246421130683,3.50627010962443,1.00727563147134,0.467225281191051,22.5965816022758,2.111830832275,1.40438715793196,1.36974374580404,1.27635454392538,22.0848941611255,22.9915658361963,3.99731714178795,11.9460407759997,4.19737126876888,47.6347869690939,51.2807981685463,44.1365237869951,2.46625541438102,4.96454756004426,2.35079810225042,5.43974237497583,3.67054849707472,2.29692785646008,0.430761996159075,1.72376986148711,2.09025761402011,4.28451220591882,1.33038306393183,4.44521471421742,6.1506478758457,15.8481681015439,3.17736781726402,1.49611180822643,3.06254034393554,53.9905803650611,18.7520482685712,25.1291397107423,47.6467505305122,40.9827290975067,34.4712350652119,0,0,0,3.12956537739216,0,0,0,1.39986421625363,0,35.5699124842401,5.07753499407941,9.74672017513146,2.05807548828758,1.71920063963254,0.515672092277442,0,0,0,2.03306719241479,3.55717918444456,1.3498495759221,1.97773272513395,3.5524005747305,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.614426133024974,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0,0.142371680799103,0.372798891650601,0.075726193333184,0.755715601067855,6.66688324013859,6.88339101585109,2.03991400112325,7.55584468292944,7.14754059192436,8.06448396775204,4.49422144421606,8.35108580632483,3.11743205523443,3.5333957451034,1.40843419776681,6.41632387071589,2.54805239706646,0,1.5154372870785,1.77351905832569,1.51657333504435,4.45317130904334,55.1537692168476,1.48442139064825,0.346970653532272,1.52232739156071,1.15307748628029,1.20578112442098,1.76383060703557,1.75933227861546,2.71914464507811,6.36237170447611,2.65383165584962,2.91180329905337,5.52103796150984,7.75800405016355,1.86391761218122,0.292780797011547,0,9.70736809792647,1.91704199209472,2.99951365496704,2.03312363316904,0.748953197024114,0.915001205637253,0.251308704225729,0.347648640384553,1.02286182932132,0.62336413367868,0.162241263067758,1.93494791315601,10.0769646194175,4.0435641349388,5.26104639716185,0.520481771850815,0.229902104433473,0.720248519221397,0.90422890701429,0.680364991513279,1.66547836370305,1.21812241927647,2.32833033665114,0,0.945530400839096,0.175951124163949,1.31517439456545,1.11218899690239,0.696504333044333,0.823128545631774,0.796137067273973,2.1066395619397,0.772043721344145,0.852490498186778,1.65700618028402,2.34526059981096,3.24111710629827,2.60419209143731,2.55793501271625,0.925602677324269,2.79040733700489,2.41446061259657,1.5179494507732,1.6455984991348,3.11918181750281,3.16168357228837,3.50879969820798,4.39100230582101,4.56301823785264,0.841159794256509,0.720332286654991,12.8863325363681,5.81791246659797,1.2797295032114,0.464473343720877,1.67527699718721,0.80673409849337,0.667134131534611,1.33157938278791,5.69434873853414,2.63518327558417,3.51869292320377,4.77495532898762,3.70431765526328,7.19055526923377,3.02593269824572,4.38110801159608,0.758671603812327,0.114248512609729,1.1270773567308,1.01825663922657,0.775809948670503,0.841629838683823,2.15004226222475,2.06654207171443,1.72698600625512,1.35736880313981,9.19003143970162,0.83422552858047,0.589676985339609,1.79889689907883,1.82574109249653,3.61765739628625,1.78238096246994,4.02774592431135,6.64754429777645,4.11842119782122,8.62609239164127,9.67566463938109,10.9213185590096,10.8608917517258,9.68746033018326,12.5435315554475,11.0851914099963,0.757965647081939,0.651859905768103,1.52770577197669,1.64283173801951,3.01511263395268,3.80869825417622,3.31727201358258,5.83250033192907,4.65075848262427,5.74037167166954,11.7981586595331,8.28887912956299,9.11289069063523,3.01582567878545,2.17562273527484,2.95058563811422,3.31124095565679,0.963303539926752,0.820481806145422,0.983609672260053,1.51482556322624,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,0.642642632843614,5.39372323791421,1.06839362200353,0.651547837414304,2.8044920905331,3.98235415019888,0.971122544619926,0.302323556964751,0.754420319023592,1.77181135728464,1.84461088766356,2.32585463851399,2.54473610634254,3.56497378384721,4.10847785316561,5.27093042874994,8.25084345985495,0,0.36012218806262,0.388076051348264,1.07168517515796,1.59606210278046,1.60531935841864,0.987294123612726,2.43571959291679,2.81606049676452,1.27099242518292,3.08739757276947,2.30840754118072,1.29171541356724,0.965006798850494,0.954978752025092,0.492422699235184,4.95517422270746,0.556275906031529,10.5939946094669,3.09580301944834,6.85219751267933,5.27431679613135,11.4823151285661,11.6676868335327,2.71965487990169,3.91864066506242,4.97519905695926,4.77335309007557,0.316335993581135,0.609958401380546,0.972048067396211,1.46361807210128,1.74690050996942,3.2367443132357,4.71124697634415,3.66458318777641,1.68499465279331,9.32008969630389,0,0.897099276263873,0.66183396182839,0.777804753376191,2.19571699912143,1.18269287843545,1.99507305697782,1.43224823328345,1.15345278868282,0,0.288030006257865,3.79213344753814,0.405450430580328,1.43795340030758,0.77952493786677,0.895133478337407,1.39076948346885,2.16351809135944,1.62458479892035,1.00966449948148,1.600342939755,1.91569751759997,2.72882066071307,2.98256709085021,3.15567635890236,2.94749498699775,0,0,0.167884616364078,5.60249822693352,2.43987218086537,3.11357761254351,2.78678892802786,8.02515366456581,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.518936737920883,0.399024873401031,0.170733605754134,1.45864030240976,1.46729213839588,1.2869045591501,0.888986911206461,0.824140228955577,1.92551525755089,2.27427490587418,2.5347929989024,1.69763707247469,2.34103768674706,1.72867911493147,1.43588672389033,1.42888107384922,1.0429589335037,1.54327376370964,1.23625770240992,2.50238164228475,2.40008476669791,1.59728225543404,1.66905332963125,2.0348498328526,1.41164070622996,1.52306294205018,0.914639864363863,1.8414879800649,1.35804113845862,1.12228454331548,2.25406534435931,0.985044823755635,2.45538625901814,1.39443157067369,1.35034627686799,1.49886346762768,0.935726433781634,1.07435527024149,1.53030665655075,2.20591419119516,3.01428186306548 | |phase1_expression=3.04282809499109,0.348975407639361,0.454999239389536,3.0246421130683,3.50627010962443,1.00727563147134,0.467225281191051,22.5965816022758,2.111830832275,1.40438715793196,1.36974374580404,1.27635454392538,22.0848941611255,22.9915658361963,3.99731714178795,11.9460407759997,4.19737126876888,47.6347869690939,51.2807981685463,44.1365237869951,2.46625541438102,4.96454756004426,2.35079810225042,5.43974237497583,3.67054849707472,2.29692785646008,0.430761996159075,1.72376986148711,2.09025761402011,4.28451220591882,1.33038306393183,4.44521471421742,6.1506478758457,15.8481681015439,3.17736781726402,1.49611180822643,3.06254034393554,53.9905803650611,18.7520482685712,25.1291397107423,47.6467505305122,40.9827290975067,34.4712350652119,0,0,0,3.12956537739216,0,0,0,1.39986421625363,0,35.5699124842401,5.07753499407941,9.74672017513146,2.05807548828758,1.71920063963254,0.515672092277442,0,0,0,2.03306719241479,3.55717918444456,1.3498495759221,1.97773272513395,3.5524005747305,0.599200221036809,0.384218305321555,0.207379224616955,0.135005938331691,0.210324961351382,0,0.662605622854841,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0.614426133024974,0.131886287730194,0.274462930807229,0,0.558365998002762,0,0.763991238884051,0,0.142371680799103,0.372798891650601,0.075726193333184,0.755715601067855,6.66688324013859,6.88339101585109,2.03991400112325,7.55584468292944,7.14754059192436,8.06448396775204,4.49422144421606,8.35108580632483,3.11743205523443,3.5333957451034,1.40843419776681,6.41632387071589,2.54805239706646,0,1.5154372870785,1.77351905832569,1.51657333504435,4.45317130904334,55.1537692168476,1.48442139064825,0.346970653532272,1.52232739156071,1.15307748628029,1.20578112442098,1.76383060703557,1.75933227861546,2.71914464507811,6.36237170447611,2.65383165584962,2.91180329905337,5.52103796150984,7.75800405016355,1.86391761218122,0.292780797011547,0,9.70736809792647,1.91704199209472,2.99951365496704,2.03312363316904,0.748953197024114,0.915001205637253,0.251308704225729,0.347648640384553,1.02286182932132,0.62336413367868,0.162241263067758,1.93494791315601,10.0769646194175,4.0435641349388,5.26104639716185,0.520481771850815,0.229902104433473,0.720248519221397,0.90422890701429,0.680364991513279,1.66547836370305,1.21812241927647,2.32833033665114,0,0.945530400839096,0.175951124163949,1.31517439456545,1.11218899690239,0.696504333044333,0.823128545631774,0.796137067273973,2.1066395619397,0.772043721344145,0.852490498186778,1.65700618028402,2.34526059981096,3.24111710629827,2.60419209143731,2.55793501271625,0.925602677324269,2.79040733700489,2.41446061259657,1.5179494507732,1.6455984991348,3.11918181750281,3.16168357228837,3.50879969820798,4.39100230582101,4.56301823785264,0.841159794256509,0.720332286654991,12.8863325363681,5.81791246659797,1.2797295032114,0.464473343720877,1.67527699718721,0.80673409849337,0.667134131534611,1.33157938278791,5.69434873853414,2.63518327558417,3.51869292320377,4.77495532898762,3.70431765526328,7.19055526923377,3.02593269824572,4.38110801159608,0.758671603812327,0.114248512609729,1.1270773567308,1.01825663922657,0.775809948670503,0.841629838683823,2.15004226222475,2.06654207171443,1.72698600625512,1.35736880313981,9.19003143970162,0.83422552858047,0.589676985339609,1.79889689907883,1.82574109249653,3.61765739628625,1.78238096246994,4.02774592431135,6.64754429777645,4.11842119782122,8.62609239164127,9.67566463938109,10.9213185590096,10.8608917517258,9.68746033018326,12.5435315554475,11.0851914099963,0.757965647081939,0.651859905768103,1.52770577197669,1.64283173801951,3.01511263395268,3.80869825417622,3.31727201358258,5.83250033192907,4.65075848262427,5.74037167166954,11.7981586595331,8.28887912956299,9.11289069063523,3.01582567878545,2.17562273527484,2.95058563811422,3.31124095565679,0.963303539926752,0.820481806145422,0.983609672260053,1.51482556322624,0.315508219416257,0.780877488593277,0.215423397732799,0.238968797952552,0,0.566153061577665,0.809621403349789,0,0,0.642642632843614,5.39372323791421,1.06839362200353,0.651547837414304,2.8044920905331,3.98235415019888,0.971122544619926,0.302323556964751,0.754420319023592,1.77181135728464,1.84461088766356,2.32585463851399,2.54473610634254,3.56497378384721,4.10847785316561,5.27093042874994,8.25084345985495,0,0.36012218806262,0.388076051348264,1.07168517515796,1.59606210278046,1.60531935841864,0.987294123612726,2.43571959291679,2.81606049676452,1.27099242518292,3.08739757276947,2.30840754118072,1.29171541356724,0.965006798850494,0.954978752025092,0.492422699235184,4.95517422270746,0.556275906031529,10.5939946094669,3.09580301944834,6.85219751267933,5.27431679613135,11.4823151285661,11.6676868335327,2.71965487990169,3.91864066506242,4.97519905695926,4.77335309007557,0.316335993581135,0.609958401380546,0.972048067396211,1.46361807210128,1.74690050996942,3.2367443132357,4.71124697634415,3.66458318777641,1.68499465279331,9.32008969630389,0,0.897099276263873,0.66183396182839,0.777804753376191,2.19571699912143,1.18269287843545,1.99507305697782,1.43224823328345,1.15345278868282,0,0.288030006257865,3.79213344753814,0.405450430580328,1.43795340030758,0.77952493786677,0.895133478337407,1.39076948346885,2.16351809135944,1.62458479892035,1.00966449948148,1.600342939755,1.91569751759997,2.72882066071307,2.98256709085021,3.15567635890236,2.94749498699775,0,0,0.167884616364078,5.60249822693352,2.43987218086537,3.11357761254351,2.78678892802786,8.02515366456581,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.518936737920883,0.399024873401031,0.170733605754134,1.45864030240976,1.46729213839588,1.2869045591501,0.888986911206461,0.824140228955577,1.92551525755089,2.27427490587418,2.5347929989024,1.69763707247469,2.34103768674706,1.72867911493147,1.43588672389033,1.42888107384922,1.0429589335037,1.54327376370964,1.23625770240992,2.50238164228475,2.40008476669791,1.59728225543404,1.66905332963125,2.0348498328526,1.41164070622996,1.52306294205018,0.914639864363863,1.8414879800649,1.35804113845862,1.12228454331548,2.25406534435931,0.985044823755635,2.45538625901814,1.39443157067369,1.35034627686799,1.49886346762768,0.935726433781634,1.07435527024149,1.53030665655075,2.20591419119516,3.01428186306548 | ||
|short_description=p1@Card6 | |short_description=p1@Card6 | ||
}} | }} |
Revision as of 11:58, 13 November 2012
Short description: | p1@Card6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Card6_5end |
Coexpression cluster: | MCL_coexpression_mm9:177 |
Association with transcript: | 0bp_to_ENSMUST00000118365, NM_001163138, uc007vcr.2_5end |
EntrezGene: | Card6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 7.49e-08 | 46 |
mesenchymal cell | 7.49e-08 | 46 |
Ontology term | p-value | n |
---|---|---|
digestive system | 3.80e-11 | 116 |
digestive tract | 3.80e-11 | 116 |
primitive gut | 3.80e-11 | 116 |
endoderm-derived structure | 3.86e-11 | 118 |
endoderm | 3.86e-11 | 118 |
presumptive endoderm | 3.86e-11 | 118 |
subdivision of digestive tract | 1.55e-10 | 114 |
foregut | 1.82e-08 | 80 |
connective tissue | 7.49e-08 | 46 |
trunk | 1.69e-07 | 90 |
trunk region element | 1.98e-07 | 79 |
exocrine gland | 5.99e-07 | 25 |
exocrine system | 5.99e-07 | 25 |
subdivision of trunk | 8.24e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.