UBERON:0004119
From FANTOM5_SSTAR
Name: | endoderm-derived structure |
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Namespace: | FANTOM |
Definition: | "An anatomical structure that develops (entirely or partially) from the endoderm." [UBERON:cjm] |
Comments: | Grouping term for query purposes |
Subset: | grouping_class |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000061(anatomical structure) |
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develops_from: | UBERON:0000925(endoderm) |
Children
is a: | UBERON:0000006 (islet of Langerhans),UBERON:0000016 (endocrine pancreas),UBERON:0000065 (respiratory tract),UBERON:0000072 (segment of respiratory tract),UBERON:0000077 (mixed endoderm/mesoderm-derived structure),UBERON:0000101 (lobe of lung),UBERON:0000117 (respiratory tube),UBERON:0000170 (pair of lungs),UBERON:0000931 (proctodeum),UBERON:0001171 (portal lobule),UBERON:0001172 (hepatic acinus),UBERON:0001173 (biliary tree),UBERON:0001280 (liver parenchyma),UBERON:0001723 (tongue),UBERON:0001726 (papilla of tongue),UBERON:0001735 (tonsillar ring),UBERON:0001736 (submandibular gland),UBERON:0001737 (larynx),UBERON:0001826 (nasal cavity mucosa),UBERON:0001831 (parotid gland),UBERON:0002046 (thyroid gland),UBERON:0002048 (lung),UBERON:0002107 (liver),UBERON:0002110 (gallbladder),UBERON:0002173 (alveolar duct),UBERON:0002299 (alveolus of lung),UBERON:0002372 (tonsil),UBERON:0002394 (bile duct),UBERON:0002397 (maxilla),UBERON:0002539 (pharyngeal arch),UBERON:0003091 (thyroid primordium),UBERON:0003295 (pharyngeal gland),UBERON:0003323 (mesenchyme of upper jaw),UBERON:0004185 (endodermal part of digestive tract),UBERON:0004647 (liver lobule),UBERON:0004894 (alveolar wall),UBERON:0004913 (hepatopancreatic ampulla),UBERON:0005020 (mucosa of tongue),UBERON:0005911 (endo-epithelium),UBERON:0006524 (alveolar system),UBERON:0006877 (vasculature of liver),UBERON:0007196 (tracheobronchial tree),UBERON:0007303 (pharyngeal vasculature),UBERON:0007329 (pancreatic duct),UBERON:0008814 (pharyngeal arch system),UBERON:0009471 (dorsum of tongue),UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0009526 (maxillary process mesenchyme),UBERON:0010046 (entire pharyngeal arch associated mesenchyme),UBERON:0010359 (pharyngeal arch mesenchyme from neural crest)... further results |
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Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10011-101C2 (bladder, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10021-101D3 (placenta, adult, pool1)
- 10022-101D4 (prostate, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
... further results Mouse (Mus musculus)
- 10011-101C2 (bladder, adult, pool1)
- 10014-101C5 (colon, adult, pool1)
- 10015-101C6 (esophagus, adult, pool1)
- 10018-101C9 (liver, adult, pool1)
- 10019-101D1 (lung, adult, pool1)
- 10021-101D3 (placenta, adult, pool1)
- 10022-101D4 (prostate, adult, pool1)
- 10024-101D6 (small intestine, adult, pool1)
- 10025-101D7 (spleen, adult, pool1)
- 10027-101D9 (thymus, adult, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004119 (endoderm-derived structure), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data