FFCP PHASE1:Mm9::chr13:58712240..58712266,-: Difference between revisions
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|id=chr13:58712240..58712266,- | |id=chr13:58712240..58712266,- | ||
|ontology_enrichment_celltype=CL:0002563!9.26e-08!9;CL:0002251!9.26e-08!9;CL:0002076!6.70e-07!15 | |ontology_enrichment_celltype=CL:0002563!9.26e-08!9;CL:0002251!9.26e-08!9;CL:0002076!6.70e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.20e-10,6;CL:0000677,1.20e-10,6;CL:0000584,1.20e-10,6;CL:0002076,2.36e-09,15;CL:0000075,5.43e-09,7;CL:0002563,9.44e-09,9;CL:0002251,9.44e-09,9;CL:0000066,1.79e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.69e-19!43;UBERON:0005409!7.23e-19!59;UBERON:0000344!5.98e-13!15;UBERON:0004119!8.85e-12!130;UBERON:0000925!8.85e-12!130;UBERON:0006595!8.85e-12!130;UBERON:0002108!1.75e-11!16;UBERON:0001242!2.55e-11!13;UBERON:0000060!2.55e-11!13;UBERON:0001262!2.55e-11!13;UBERON:0004786!2.55e-11!13;UBERON:0001007!3.63e-11!128;UBERON:0001555!3.63e-11!128;UBERON:0007026!3.63e-11!128;UBERON:0004921!4.11e-10!126;UBERON:0004185!4.11e-10!126;UBERON:0004923!1.80e-09!24;UBERON:0003100!1.56e-08!11;UBERON:0001264!1.57e-08!12;UBERON:0003922!1.57e-08!12;UBERON:0002114!1.57e-08!12;UBERON:0003923!1.57e-08!12;UBERON:0003924!1.57e-08!12;UBERON:0003921!1.57e-08!12;UBERON:0003350!9.26e-08!9;UBERON:0004808!9.26e-08!9;UBERON:0001277!9.26e-08!9;UBERON:0007023!9.38e-08!51;UBERON:0001045!1.44e-07!13 | |ontology_enrichment_uberon=UBERON:0000160!4.69e-19!43;UBERON:0005409!7.23e-19!59;UBERON:0000344!5.98e-13!15;UBERON:0004119!8.85e-12!130;UBERON:0000925!8.85e-12!130;UBERON:0006595!8.85e-12!130;UBERON:0002108!1.75e-11!16;UBERON:0001242!2.55e-11!13;UBERON:0000060!2.55e-11!13;UBERON:0001262!2.55e-11!13;UBERON:0004786!2.55e-11!13;UBERON:0001007!3.63e-11!128;UBERON:0001555!3.63e-11!128;UBERON:0007026!3.63e-11!128;UBERON:0004921!4.11e-10!126;UBERON:0004185!4.11e-10!126;UBERON:0004923!1.80e-09!24;UBERON:0003100!1.56e-08!11;UBERON:0001264!1.57e-08!12;UBERON:0003922!1.57e-08!12;UBERON:0002114!1.57e-08!12;UBERON:0003923!1.57e-08!12;UBERON:0003924!1.57e-08!12;UBERON:0003921!1.57e-08!12;UBERON:0003350!9.26e-08!9;UBERON:0004808!9.26e-08!9;UBERON:0001277!9.26e-08!9;UBERON:0007023!9.38e-08!51;UBERON:0001045!1.44e-07!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,5.43e-18,15;UBERON:0001264,4.06e-15,12;UBERON:0001242,5.04e-15,13;UBERON:0001262,5.04e-15,13;UBERON:0004786,5.04e-15,13;UBERON:0007023,6.68e-11,51;UBERON:0004923,5.71e-10,24;UBERON:0000160,1.26e-09,31;UBERON:0005409,1.33e-09,47;UBERON:0003350,9.44e-09,9;UBERON:0004808,9.44e-09,9;UBERON:0001277,9.44e-09,9;UBERON:0002075,1.31e-08,19;UBERON:0000485,6.12e-07,11 | |||
|phase1_expression=0,5.58360652222978,2.27499619694768,3.0246421130683,2.50447864973174,5.54001597309236,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,3.51983330145495,3.21172993494038,2.8711598205751,1.29228598847722,3.878482188346,5.13063232532209,6.5527833737582,3.76941868114018,0,0,0,0.866554859253824,0.498703936075477,1.22501613757421,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.11966273549084,2.52722758433675,5.26104639716185,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0.696504333044333,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,3.63460661282178,4.7601101999438,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,1.72910439899755,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,29.0140921081231,30.0771053472158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.651547837414304,2.14461159864296,3.98235415019888,3.64170954232472,2.72091201268276,3.39489143560617,1.77181135728464,3.3817866273832,3.6179961043551,1.81766864738753,2.13898427030833,2.84433082142234,0,2.06271086496374,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,2.8668691747145,0.98931751764888,2.26050197374268,0.904693873922338,0.835606408021955,0.164140899745061,0.291480836629851,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,1.88179466413022,1.74690050996942,1.48350781023303,1.65306911450672,1.57053565190418,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,2.0405734525369,0,0,0,0.19318959403219,5.63047426353546,5.67770035228522,8.1459984050045,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0 | |phase1_expression=0,5.58360652222978,2.27499619694768,3.0246421130683,2.50447864973174,5.54001597309236,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,3.51983330145495,3.21172993494038,2.8711598205751,1.29228598847722,3.878482188346,5.13063232532209,6.5527833737582,3.76941868114018,0,0,0,0.866554859253824,0.498703936075477,1.22501613757421,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,2.38140145112336,1.52015919285059,2.02209778005913,0.68510327831436,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,4.59822699375465,0,0,0,0,0,0,0,0,0,0,0.101839363850316,1.11966273549084,2.52722758433675,5.26104639716185,0.130120442962704,0,0,0,0,0,0.0937017245597288,0.776110112217047,0,0,0,0,0,0.696504333044333,1.85203922767149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,3.63460661282178,4.7601101999438,0,0,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0.898819408654221,1.72910439899755,2.98711909881551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0,0,0.157635144106191,0.221464689648775,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,29.0140921081231,30.0771053472158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0.35613120733451,0.651547837414304,2.14461159864296,3.98235415019888,3.64170954232472,2.72091201268276,3.39489143560617,1.77181135728464,3.3817866273832,3.6179961043551,1.81766864738753,2.13898427030833,2.84433082142234,0,2.06271086496374,0,0,0,0,0.177340233642274,0.178368817602071,0.329098041204242,0,0.23467170806371,0.21183207086382,2.8668691747145,0.98931751764888,2.26050197374268,0.904693873922338,0.835606408021955,0.164140899745061,0.291480836629851,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.609958401380546,0.108005340821801,1.88179466413022,1.74690050996942,1.48350781023303,1.65306911450672,1.57053565190418,0,1.86401793926078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.120195449519969,0,0,0,0,0,0.0962118416403295,0,2.0405734525369,0,0,0,0.19318959403219,5.63047426353546,5.67770035228522,8.1459984050045,2.50786052017682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0.505394423527595,0.50695859978048,0.188626341386076,0.0936415074698824,0.192075457214608,0.34461281373368,0,0.115884325944855,0.38581844092741,0,0,0,0,0,0.290692833264657,0,0.169229215783353,0.182927972872773,0,0,0,0,0.0985044823755635,0,0.154936841185966,0.192906610981141,0.749431733813838,0.467863216890817,0.429742108096597,0.382576664137687,0.220591419119515,0 | ||
|short_description=p1@Slc28a3 | |short_description=p1@Slc28a3 | ||
}} | }} |
Revision as of 22:25, 13 November 2012
Short description: | p1@Slc28a3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Slc28a3_5end |
Coexpression cluster: | MCL_coexpression_mm9:37 |
Association with transcript: | -2bp_to_ENSMUST00000022036, ENSMUST00000148396, NM_022317, uc007qud.1, uc007que.1_5end |
EntrezGene: | Slc28a3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.20e-10 | 6 |
gut absorptive cell | 1.20e-10 | 6 |
enterocyte | 1.20e-10 | 6 |
endo-epithelial cell | 2.36e-09 | 15 |
columnar/cuboidal epithelial cell | 5.43e-09 | 7 |
intestinal epithelial cell | 9.44e-09 | 9 |
epithelial cell of alimentary canal | 9.44e-09 | 9 |
epithelial cell | 1.79e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 5.43e-18 | 15 |
pancreas | 4.06e-15 | 12 |
intestinal mucosa | 5.04e-15 | 13 |
wall of intestine | 5.04e-15 | 13 |
gastrointestinal system mucosa | 5.04e-15 | 13 |
adult organism | 6.68e-11 | 51 |
organ component layer | 5.71e-10 | 24 |
intestine | 1.26e-09 | 31 |
gastrointestinal system | 1.33e-09 | 47 |
epithelium of mucosa | 9.44e-09 | 9 |
gastrointestinal system epithelium | 9.44e-09 | 9 |
intestinal epithelium | 9.44e-09 | 9 |
viscus | 1.31e-08 | 19 |
simple columnar epithelium | 6.12e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.