FFCP PHASE1:Mm9::chr19:4059037..4059061,-: Difference between revisions
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|id=chr19:4059037..4059061,- | |id=chr19:4059037..4059061,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.10e-15,3;CL:0000239,5.48e-13,6;CL:0000677,5.48e-13,6;CL:0000584,5.48e-13,6;CL:0000066,1.45e-11,25;CL:0000075,3.70e-11,7;CL:0002563,1.04e-08,9;CL:0002251,1.04e-08,9;CL:0000473,5.50e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!6.71e-12!55;UBERON:0001007!3.64e-11!128;UBERON:0001555!3.64e-11!128;UBERON:0007026!3.64e-11!128;UBERON:0004119!8.84e-11!130;UBERON:0000925!8.84e-11!130;UBERON:0006595!8.84e-11!130;UBERON:0004921!8.51e-10!126;UBERON:0004185!8.51e-10!126;UBERON:0000490!2.23e-09!66;UBERON:0005911!1.78e-08!69;UBERON:0000344!1.06e-07!15;UBERON:0005057!1.38e-07!51;UBERON:0000160!3.37e-07!43;UBERON:0002107!5.38e-07!22;UBERON:0007499!5.38e-07!22;UBERON:0006925!5.38e-07!22;UBERON:0009497!5.38e-07!22;UBERON:0000015!5.38e-07!22;UBERON:0002423!5.38e-07!22;UBERON:0006235!5.38e-07!22;UBERON:0008835!5.38e-07!22;UBERON:0003894!5.38e-07!22;UBERON:0004161!5.38e-07!22;UBERON:0008836!5.38e-07!22 | |ontology_enrichment_uberon=UBERON:0003929!6.71e-12!55;UBERON:0001007!3.64e-11!128;UBERON:0001555!3.64e-11!128;UBERON:0007026!3.64e-11!128;UBERON:0004119!8.84e-11!130;UBERON:0000925!8.84e-11!130;UBERON:0006595!8.84e-11!130;UBERON:0004921!8.51e-10!126;UBERON:0004185!8.51e-10!126;UBERON:0000490!2.23e-09!66;UBERON:0005911!1.78e-08!69;UBERON:0000344!1.06e-07!15;UBERON:0005057!1.38e-07!51;UBERON:0000160!3.37e-07!43;UBERON:0002107!5.38e-07!22;UBERON:0007499!5.38e-07!22;UBERON:0006925!5.38e-07!22;UBERON:0009497!5.38e-07!22;UBERON:0000015!5.38e-07!22;UBERON:0002423!5.38e-07!22;UBERON:0006235!5.38e-07!22;UBERON:0008835!5.38e-07!22;UBERON:0003894!5.38e-07!22;UBERON:0004161!5.38e-07!22;UBERON:0008836!5.38e-07!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.69e-15,15;UBERON:0002465,7.91e-15,3;UBERON:0004923,8.68e-12,24;UBERON:0001962,6.66e-11,2;UBERON:0001961,6.66e-11,2;UBERON:0001744,6.66e-11,2;UBERON:0001242,4.73e-09,13;UBERON:0001262,4.73e-09,13;UBERON:0004786,4.73e-09,13;UBERON:0003350,1.04e-08,9;UBERON:0004808,1.04e-08,9;UBERON:0001277,1.04e-08,9;UBERON:0000485,3.80e-07,11 | |||
|phase1_expression=0,12.2141392673776,16.8349718574128,0,0.500895729946347,6.88305014838748,10.9797941079897,0.129123323441576,0,0,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,19.679068003589,18.1233332043064,14.3557991028755,27.9995297503399,25.4256054569349,0.190023419456374,0,9.09095093686749,0,1.23012957516914,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.579728977403356,0,19.7191686775248,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0.484875253135222,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,2.18852119245266,1.55971269695296,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,1.72617682470486,0.162135226775035,0,2.87536413054709,1.48856379067401,0.624075346229121,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | |phase1_expression=0,12.2141392673776,16.8349718574128,0,0.500895729946347,6.88305014838748,10.9797941079897,0.129123323441576,0,0,0.171217968225505,0.239316476986009,0.342401459862411,0.174840804837995,0.333109761815663,0,0,0,0,0,0.0850432901510698,0,0,19.679068003589,18.1233332043064,14.3557991028755,27.9995297503399,25.4256054569349,0.190023419456374,0,9.09095093686749,0,1.23012957516914,0,0,0.332469290716985,0,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.579728977403356,0,19.7191686775248,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0,1.73036477414062,0,0,0,0,0.484875253135222,0,0,0,0.766371165625774,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.444756087689741,0.380451252225118,0.474529061544512,0.164698954724011,0.754005626400808,2.18852119245266,1.55971269695296,0.898819408654221,0.216138049874694,0.796565093017469,0,0,0,0.203651327845314,0,0,0,0,0,0,0.296452627087149,0,0.196558995113203,0.224862112384854,0.405720242777006,0,0.50925170356284,1.72617682470486,0.162135226775035,0,2.87536413054709,1.48856379067401,0.624075346229121,0,0,0.482443521363367,0,0,0,0,0,0,0,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.874442509889552,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0,0.324016022465404,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0.360586348559907,0,0,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0.116876902181569,0,0,0.179427713218951,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441182838239031,0 | ||
|short_description=p@chr19:4059037..4059061,- | |short_description=p@chr19:4059037..4059061,- | ||
}} | }} |
Revision as of 03:09, 14 November 2012
Short description: | p@chr19:4059037..4059061, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:4059037..4059061, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.10e-15 | 3 |
brush border epithelial cell | 5.48e-13 | 6 |
gut absorptive cell | 5.48e-13 | 6 |
enterocyte | 5.48e-13 | 6 |
epithelial cell | 1.45e-11 | 25 |
columnar/cuboidal epithelial cell | 3.70e-11 | 7 |
intestinal epithelial cell | 1.04e-08 | 9 |
epithelial cell of alimentary canal | 1.04e-08 | 9 |
defensive cell | 5.50e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
mucosa | 4.69e-15 | 15 |
lymphoid system | 7.91e-15 | 3 |
organ component layer | 8.68e-12 | 24 |
gut-associated lymphoid tissue | 6.66e-11 | 2 |
mucosa-associated lymphoid tissue | 6.66e-11 | 2 |
lymphoid tissue | 6.66e-11 | 2 |
intestinal mucosa | 4.73e-09 | 13 |
wall of intestine | 4.73e-09 | 13 |
gastrointestinal system mucosa | 4.73e-09 | 13 |
epithelium of mucosa | 1.04e-08 | 9 |
gastrointestinal system epithelium | 1.04e-08 | 9 |
intestinal epithelium | 1.04e-08 | 9 |
simple columnar epithelium | 3.80e-07 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.