FFCP PHASE1:Mm9::chr13:45056916..45056919,+: Difference between revisions
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|id=chr13:45056916..45056919,+ | |id=chr13:45056916..45056919,+ | ||
|ontology_enrichment_celltype=CL:0000239!2.43e-31!6;CL:0000677!2.43e-31!6;CL:0000212!2.43e-31!6;CL:0000584!2.43e-31!6;CL:0002563!8.89e-28!9;CL:0002251!8.89e-28!9;CL:0000075!7.91e-27!7;CL:0000066!8.75e-20!25;CL:0000473!8.31e-17!3;CL:0000627!8.31e-17!3;CL:0000682!8.31e-17!3;CL:0002076!1.94e-16!15;CL:0000223!3.58e-12!20 | |ontology_enrichment_celltype=CL:0000239!2.43e-31!6;CL:0000677!2.43e-31!6;CL:0000212!2.43e-31!6;CL:0000584!2.43e-31!6;CL:0002563!8.89e-28!9;CL:0002251!8.89e-28!9;CL:0000075!7.91e-27!7;CL:0000066!8.75e-20!25;CL:0000473!8.31e-17!3;CL:0000627!8.31e-17!3;CL:0000682!8.31e-17!3;CL:0002076!1.94e-16!15;CL:0000223!3.58e-12!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,8.55e-27,3;CL:0000239,9.58e-24,6;CL:0000677,9.58e-24,6;CL:0000584,9.58e-24,6;CL:0000075,2.01e-20,7;CL:0000066,6.14e-17,25;CL:0002563,5.53e-16,9;CL:0002251,5.53e-16,9;CL:0000473,6.80e-12,7;CL:0002076,9.79e-10,15;CL:0000223,2.25e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.73e-48!15;UBERON:0001242!4.33e-39!13;UBERON:0000060!4.33e-39!13;UBERON:0001262!4.33e-39!13;UBERON:0004786!4.33e-39!13;UBERON:0004923!9.48e-30!24;UBERON:0003350!8.89e-28!9;UBERON:0004808!8.89e-28!9;UBERON:0001277!8.89e-28!9;UBERON:0000485!1.25e-22!11;UBERON:0000331!1.06e-16!3;UBERON:0002116!1.06e-16!3;UBERON:0001204!1.06e-16!3;UBERON:0001168!1.06e-16!3;UBERON:0000160!7.68e-16!43;UBERON:0001962!3.42e-11!2;UBERON:0001961!3.42e-11!2;UBERON:0001744!3.42e-11!2;UBERON:0005409!4.35e-11!59;UBERON:0002465!9.44e-08!3;UBERON:0000064!4.58e-07!99 | |ontology_enrichment_uberon=UBERON:0000344!1.73e-48!15;UBERON:0001242!4.33e-39!13;UBERON:0000060!4.33e-39!13;UBERON:0001262!4.33e-39!13;UBERON:0004786!4.33e-39!13;UBERON:0004923!9.48e-30!24;UBERON:0003350!8.89e-28!9;UBERON:0004808!8.89e-28!9;UBERON:0001277!8.89e-28!9;UBERON:0000485!1.25e-22!11;UBERON:0000331!1.06e-16!3;UBERON:0002116!1.06e-16!3;UBERON:0001204!1.06e-16!3;UBERON:0001168!1.06e-16!3;UBERON:0000160!7.68e-16!43;UBERON:0001962!3.42e-11!2;UBERON:0001961!3.42e-11!2;UBERON:0001744!3.42e-11!2;UBERON:0005409!4.35e-11!59;UBERON:0002465!9.44e-08!3;UBERON:0000064!4.58e-07!99 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.94e-28,15;UBERON:0001242,1.92e-24,13;UBERON:0001262,1.92e-24,13;UBERON:0004786,1.92e-24,13;UBERON:0004923,9.97e-18,24;UBERON:0003350,5.53e-16,9;UBERON:0004808,5.53e-16,9;UBERON:0001277,5.53e-16,9;UBERON:0000485,3.77e-13,11;UBERON:0000331,4.82e-13,3;UBERON:0002116,4.82e-13,3;UBERON:0001204,4.82e-13,3;UBERON:0001168,4.82e-13,3;UBERON:0000160,3.20e-10,31;UBERON:0002108,5.10e-10,4;UBERON:0003199,1.03e-09,1 | |||
|phase1_expression=0,3.48975407639361,2.27499619694768,2.72217790176147,8.01433167914156,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,1.83527424853736,2.8711598205751,2.58457197695445,3.878482188346,4.94060890586572,7.05684363327806,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,3.48975407639361,2.27499619694768,2.72217790176147,8.01433167914156,0.671517087647559,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639969691173627,1.83527424853736,2.8711598205751,2.58457197695445,3.878482188346,4.94060890586572,7.05684363327806,0.443461021310609,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898819408654221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr13:45056916..45056919,+ | |short_description=p@chr13:45056916..45056919,+ | ||
}} | }} |
Revision as of 18:06, 14 November 2012
Short description: | p@chr13:45056916..45056919, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:45056916..45056919, + |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 8.55e-27 | 3 |
brush border epithelial cell | 9.58e-24 | 6 |
gut absorptive cell | 9.58e-24 | 6 |
enterocyte | 9.58e-24 | 6 |
columnar/cuboidal epithelial cell | 2.01e-20 | 7 |
epithelial cell | 6.14e-17 | 25 |
intestinal epithelial cell | 5.53e-16 | 9 |
epithelial cell of alimentary canal | 5.53e-16 | 9 |
defensive cell | 6.80e-12 | 7 |
endo-epithelial cell | 9.79e-10 | 15 |
endodermal cell | 2.25e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.94e-28 | 15 |
intestinal mucosa | 1.92e-24 | 13 |
wall of intestine | 1.92e-24 | 13 |
gastrointestinal system mucosa | 1.92e-24 | 13 |
organ component layer | 9.97e-18 | 24 |
epithelium of mucosa | 5.53e-16 | 9 |
gastrointestinal system epithelium | 5.53e-16 | 9 |
intestinal epithelium | 5.53e-16 | 9 |
simple columnar epithelium | 3.77e-13 | 11 |
ileal mucosa | 4.82e-13 | 3 |
ileum | 4.82e-13 | 3 |
mucosa of small intestine | 4.82e-13 | 3 |
wall of small intestine | 4.82e-13 | 3 |
intestine | 3.20e-10 | 31 |
small intestine | 5.10e-10 | 4 |
egg chamber | 1.03e-09 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.