FFCP PHASE1:Hg19::chr4:174256283..174256303,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000333!1.95e-09!41;CL:0000133!4.18e-09!59;CL:0002319!1.18e-08!25;CL:0000095!1.63e-07!17;CL:0000123!1.63e-07!17;CL:0000066!1.90e-07!254;CL:0000548!2.04e-07!679;CL:0000004!2.04e-07!679;CL:0000255!2.04e-07!679;CL:0000012!3.20e-07!682 | |ontology_enrichment_celltype=CL:0000333!1.95e-09!41;CL:0000133!4.18e-09!59;CL:0002319!1.18e-08!25;CL:0000095!1.63e-07!17;CL:0000123!1.63e-07!17;CL:0000066!1.90e-07!254;CL:0000548!2.04e-07!679;CL:0000004!2.04e-07!679;CL:0000255!2.04e-07!679;CL:0000012!3.20e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0002319;3.88e-07;25 | |ontology_enrichment_celltype_v019=CL:0002319;3.88e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000133,2.81e-08,59;CL:0000333,1.41e-07,41;CL:0002319,2.51e-07,25 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:162!6.09e-34!235;DOID:14566!1.77e-32!239;DOID:0050686!7.36e-20!137;DOID:0050687!7.79e-18!143;DOID:305!2.11e-14!106;DOID:2531!7.34e-11!51;DOID:0060083!7.34e-11!51;DOID:1240!2.74e-08!39 | |ontology_enrichment_disease=DOID:162!6.09e-34!235;DOID:14566!1.77e-32!239;DOID:0050686!7.36e-20!137;DOID:0050687!7.79e-18!143;DOID:305!2.11e-14!106;DOID:2531!7.34e-11!51;DOID:0060083!7.34e-11!51;DOID:1240!2.74e-08!39 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:162,2.06e-13,235;DOID:14566,8.75e-13,239;DOID:0050687,1.20e-10,143;DOID:305,1.96e-08,106;DOID:0050686,1.59e-07,137 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@HMGB2 | |short_description=p6@HMGB2 | ||
}} | }} |
Revision as of 07:08, 18 November 2012
Short description: | p6@HMGB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_HMGB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000296503_5end |
EntrezGene: | HMGB2 |
HGNC: | 5000 |
UniProt: | P26583 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 2.81e-08 | 59 |
migratory neural crest cell | 1.41e-07 | 41 |
neural cell | 2.51e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.06e-13 | 235 |
disease of cellular proliferation | 8.75e-13 | 239 |
cell type cancer | 1.20e-10 | 143 |
carcinoma | 1.96e-08 | 106 |
organ system cancer | 1.59e-07 | 137 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.