FFCP PHASE1:Hg19::chr18:61254400..61254410,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!2.00e-12!43;CL:0002251!3.12e-12!21;CL:0000223!7.76e-11!59;CL:0002336!2.22e-08!1;CL:0002261!2.22e-08!1;CL:0002170!2.22e-08!1 | |ontology_enrichment_celltype=CL:0002076!2.00e-12!43;CL:0002251!3.12e-12!21;CL:0000223!7.76e-11!59;CL:0002336!2.22e-08!1;CL:0002261!2.22e-08!1;CL:0002170!2.22e-08!1 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:1749!8.02e-19!14;DOID:3151!3.31e-09!1;DOID:3149!3.31e-09!1;DOID:4362!5.40e-07!5 | |ontology_enrichment_disease=DOID:1749!8.02e-19!14;DOID:3151!3.31e-09!1;DOID:3149!3.31e-09!1;DOID:4362!5.40e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:3151;3.34e-66;1!DOID:3149;3.34e-66;1!DOID:3451;5.96e-34;2!DOID:4159;5.96e-34;2!DOID:0060122;5.96e-34;2!DOID:4362;1.40e-14;5 | |ontology_enrichment_disease_v019=DOID:3151;3.34e-66;1!DOID:3149;3.34e-66;1!DOID:3451;5.96e-34;2!DOID:4159;5.96e-34;2!DOID:0060122;5.96e-34;2!DOID:4362;1.40e-14;5 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,2.39e-66,1;DOID:3149,2.39e-66,1;DOID:3451,5.04e-34,2;DOID:4159,5.04e-34,2;DOID:0060122,5.04e-34,2;DOID:4362,1.40e-14,5 | |||
|ontology_enrichment_uberon=UBERON:0003729!7.65e-24!5;UBERON:0000974!1.45e-18!10;UBERON:0003343!1.74e-17!4;UBERON:0004785!1.74e-17!4;UBERON:0000341!6.78e-16!2;UBERON:0000344!3.77e-15!12;UBERON:0000166!3.67e-12!21;UBERON:0000165!5.06e-12!28;UBERON:0000930!5.06e-12!28;UBERON:0000002!9.17e-12!6;UBERON:0001560!9.17e-12!6;UBERON:0001004!2.32e-10!72;UBERON:0000997!3.58e-09!1;UBERON:0005056!3.58e-09!1;UBERON:0001444!1.07e-08!48;UBERON:0002372!1.78e-08!1;UBERON:0001961!1.78e-08!1;UBERON:0001744!1.78e-08!1;UBERON:0001735!1.78e-08!1;UBERON:0000161!4.26e-07!35;UBERON:0004119!6.42e-07!169;UBERON:0000925!6.42e-07!169;UBERON:0006595!6.42e-07!169 | |ontology_enrichment_uberon=UBERON:0003729!7.65e-24!5;UBERON:0000974!1.45e-18!10;UBERON:0003343!1.74e-17!4;UBERON:0004785!1.74e-17!4;UBERON:0000341!6.78e-16!2;UBERON:0000344!3.77e-15!12;UBERON:0000166!3.67e-12!21;UBERON:0000165!5.06e-12!28;UBERON:0000930!5.06e-12!28;UBERON:0000002!9.17e-12!6;UBERON:0001560!9.17e-12!6;UBERON:0001004!2.32e-10!72;UBERON:0000997!3.58e-09!1;UBERON:0005056!3.58e-09!1;UBERON:0001444!1.07e-08!48;UBERON:0002372!1.78e-08!1;UBERON:0001961!1.78e-08!1;UBERON:0001744!1.78e-08!1;UBERON:0001735!1.78e-08!1;UBERON:0000161!4.26e-07!35;UBERON:0004119!6.42e-07!169;UBERON:0000925!6.42e-07!169;UBERON:0006595!6.42e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000997;3.34e-66;1!UBERON:0005056;3.34e-66;1!UBERON:0004176;3.34e-66;1!UBERON:0000014;9.45e-18;4!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0003134;2.74e-09;33!UBERON:0000474;1.23e-08;37!UBERON:0003100;5.50e-08;41 | |ontology_enrichment_uberon_v019=UBERON:0000997;3.34e-66;1!UBERON:0005056;3.34e-66;1!UBERON:0004176;3.34e-66;1!UBERON:0000014;9.45e-18;4!UBERON:0000002;2.19e-12;6!UBERON:0001560;2.19e-12;6!UBERON:0003134;2.74e-09;33!UBERON:0000474;1.23e-08;37!UBERON:0003100;5.50e-08;41 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000997,4.66e-66,1;UBERON:0005056,4.66e-66,1;UBERON:0000014,8.69e-18,4;UBERON:0000002,2.19e-12,6;UBERON:0001560,2.19e-12,6;UBERON:0003134,2.92e-08,37;UBERON:0000474,2.92e-08,37;UBERON:0003100,1.47e-07,41 | |||
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|short_description=p8@SERPINB13 | |short_description=p8@SERPINB13 | ||
}} | }} |
Revision as of 15:41, 20 November 2012
Short description: | p8@SERPINB13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SERPINB13_5end |
Coexpression cluster: | C820_cervical_tongue_esophagus_throat_tonsil_oral_uterus |
Association with transcript: | -123bp_to_ENST00000269489, NM_012397, uc002ljc.2, uc002ljd.2, uc010xep.1, uc010xeq.1, uc010xer.1_5end |
EntrezGene: | SERPINB13 |
HGNC: | 8944 |
UniProt: | Q9UIV8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammalian vulva | 4.66e-66 | 1 |
external female genitalia | 4.66e-66 | 1 |
zone of skin | 8.69e-18 | 4 |
uterine cervix | 2.19e-12 | 6 |
neck of organ | 2.19e-12 | 6 |
female reproductive organ | 2.92e-08 | 37 |
female reproductive system | 2.92e-08 | 37 |
female organism | 1.47e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.39e-66 | 1 |
keratoacanthoma | 2.39e-66 | 1 |
skin carcinoma | 5.04e-34 | 2 |
skin cancer | 5.04e-34 | 2 |
integumentary system cancer | 5.04e-34 | 2 |
cervical cancer | 1.40e-14 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.