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Coexpression cluster:C19: Difference between revisions

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|tf_chipseq_enrich=JUNB#3726;41:1.61523286879365:0.00219104073600709:0.0126327759427981!MAFF#23764;29:2.10186015213438:0.000196675016207157:0.00236342676535028!MAFK#7975;47:1.63929788607208:0.000800752302881657:0.00611552246878664!NFYA#4800;424:10.0546283355575:3.10234688467927e-318:2.94550914803707e-314!NFYB#4801;358:7.72201542440933:6.4969602989265e-221:3.57124229820834e-217
|tf_chipseq_enrich=JUNB#3726;41:1.61523286879365:0.00219104073600709:0.0126327759427981!MAFF#23764;29:2.10186015213438:0.000196675016207157:0.00236342676535028!MAFK#7975;47:1.63929788607208:0.000800752302881657:0.00611552246878664!NFYA#4800;424:10.0546283355575:3.10234688467927e-318:2.94550914803707e-314!NFYB#4801;358:7.72201542440933:6.4969602989265e-221:3.57124229820834e-217
|tfbs_overrepresentation=0.999999,0.998239,1,0.999957,1,1,0.999859,1,0.991534,0.903924,1,1,1,1,0.999987,0.99999,1,0.999998,0.998277,1,1,0.999961,1,1,0.998786,1,1,1,1,1,1,1,0.99102,1,0.999997,0.999969,1,0.999115,0.999999,1,1,0.771155,0.999996,1,0.233392,0.985778,0.999956,1,1,0.999998,1,0.998684,0.895466,1,1,0.999563,1,1,1,1,0.983124,1,0.999535,0.999988,1,0.999246,1,0.999984,1,1,5.52816e-42,0.999925,0.999999,0.999991,0.856808,0.988574,1,0.999991,0.999418,0.848208,0.999989,1,0.999987,1,1,1,1,1,1,0.999951,0.999917,0.999973,1,0.998528,1,1,1,1,1,1,0.999839,1,1,0.999944,1,0.999764,1,1,1,1,1,0.999871,1,0.944697,1,0.998641,0.995117,0.999996,1,0.999998,1,1,0.999999,1,1,1,0.99997,0.978934,1,0.99999,0.999982,0.998095,0.999829,0.982195,1,1,0.998393,0.999994,0.998387,0.641721,0.982154,1,1,0.999999,1,1,1,0.999658,0.999966,0.999999,1,1,1,0.992562,0.999848,1,1,1,0.999883,0.999862,1,1,1,1,1,1,0.980016,1,0.998404,1,0.999926,1,1,0.999999,0.999919,1,1,1,1,0.995476,1,0.999998,0.999251,0.999999,0.999996,1,1,0.998339,1,1,1,1,1,1,1,0.985065,0.999969,1,0.999708,1,0.999871,0.999998,0.9997,0.999986,1,1,1,0.999983,1,1,0.999995,1,1,1,1,1,1,1,0.997722,1,1,1,1,1,0.999981,1,0.999998,1,1,0.999998,1,1,0.998858,1,1,0.999995,0.999667,1,0.999999,1,1,1,0.998879,1,1,1,0.999997,1,1,1,1,1,1,1,1,1,1,0.999998,0.99999,1,0.99907,1,1,1,0.98018,1,0.999984,0.527789,0.999786,0.999987,1,0.999957,1,1,1,0.997334,1,1,1,0.888491,1,1,1,1,1,1,1,0.158166,1,1,1,1,1.84883e-18,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,5.17641e-125,7.71137e-26,1,1,1,1,1,1,1,1,1,1,0.999982,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999917,0.999985,1,1,1,1,1,1,0.967619,1,1,1,1,1,1,1,1,1,0.999997,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,1,0.999899,1,1,1,1,1,1,1,1,1,1,0.999812,0.999994,0.999741,0.999993,0.999996,1,1,1,1,1,1,1,1,0.999877,1,1,0.999996,0.999988,1,0.000305107,1,0.990729,0.000167023,1,1,0.785075,0.259906,1,7.36029e-43,1,1,1,1,0.999279,0.635645,1,1,1,1,1,0.999976,0.000507048,0.999981,3.98374e-60,1,1,1,1,1,1,0.999733,1,1,1,1,1,1,0.999996,1,0.946697,1,1,1,0.713391,1,1,1,0.996722,1,0.997319,0.999498,1,1,0.999978,0.999993,1,1,0.999998,0.999057,1,1,1,0.977835,0.999996,1,1,1,0.999411,1,1,0.999945,1,0.99996,0.995263,0.998877,0.999965,1,0.999961,1,0.999998,1,1,0.9984,3.15033e-92,1,0.998056,0.999983,1,1,0.999998,1,1,0.995365,1,1,0.997768,0.999999,0.999993,0.999995,1,1,1,0.999999,1,0.996646,4.16592e-118,0.998484,1,0.999999,1,1,1,1,1,0.999991,0.999988,1,1,0.999996,0.999987,1,0.999998,0.999963,0.999998,1,1,1,1,0.999999,1,0.999998,0.999999,0.999998,0.999999,1,0.999872,1,1,1,1,1,1,1,1,1,1,0.999971,0.998595,1,0.999925,1,1,0.999967,1,1,0.999127,0.999999,1,1,1,2.01997e-36,1,0.999921,9.41969e-22,0.999992,0.996578,0.999893,1,1,0.999927,1,0.998355,1,1,0.999478,1,0.999444,0.999931,1,0.999981,1,1,1,0.967081,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999994,0.999627,1,1,0.999993,1,1,1,1,1,1,1,1,0.999991,1,1,1,1,1,1,1,1,1,1,1,0.999993,1,0.990563,1,0.999715,1,0.997099,1,0.999801,1,1,1,1,0.999998,1,1,1,1,1,1,0.9959,1,1,0.996657,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.010553,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.967949,1,1,1,1,1,1,1,1,1,1,1,1,1,7.31304e-53,1,1,1,1,1,1,1,1,0.99985,1,1,1,1,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,0.997801,1,1,1,1,1,1,1,1,0.999921,1,1,1,1,1,1,1,0.999999,1,1,1,9.16395e-06,1,0.999998,1,1,1,1,1,0.999988,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,1,0.999607,1,1,0.993153,1,1,1,0.999994,1,1,1,1,1,1,0.999889,0.999989,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,1,0.999813,1,0.999996,1,1,1,0.999735,1,1,1,1,0.999983,1,1,1,1,1,1,1,1,0.999571,0.999996,0.999986,0.997837,1,1,1,1,0.999852,0.999999,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998872,1,1,1,1,1,1.22361e-259,1,1,0.99995,1,1,1,1,1,1,1,0.999633,1,1,1,1,1,0.999759,1,1,1,1,0.99995,1,1,0.998521,0.999929,1,0.999616,0.999752,0.999928,1,1,1,1,1,1,0.998456,0.999998,0.999404,1,0.999994,0.999998,0.998782,1,1,1,0.999992,0.998919,1,0.987105,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,0.999997,1,1,1,1,1,0.999965,1,0.999999,1,1,1,1,1,1,1
|tfbs_overrepresentation=0.999999,0.998239,1,0.999957,1,1,0.999859,1,0.991534,0.903924,1,1,1,1,0.999987,0.99999,1,0.999998,0.998277,1,1,0.999961,1,1,0.998786,1,1,1,1,1,1,1,0.99102,1,0.999997,0.999969,1,0.999115,0.999999,1,1,0.771155,0.999996,1,0.233392,0.985778,0.999956,1,1,0.999998,1,0.998684,0.895466,1,1,0.999563,1,1,1,1,0.983124,1,0.999535,0.999988,1,0.999246,1,0.999984,1,1,5.52816e-42,0.999925,0.999999,0.999991,0.856808,0.988574,1,0.999991,0.999418,0.848208,0.999989,1,0.999987,1,1,1,1,1,1,0.999951,0.999917,0.999973,1,0.998528,1,1,1,1,1,1,0.999839,1,1,0.999944,1,0.999764,1,1,1,1,1,0.999871,1,0.944697,1,0.998641,0.995117,0.999996,1,0.999998,1,1,0.999999,1,1,1,0.99997,0.978934,1,0.99999,0.999982,0.998095,0.999829,0.982195,1,1,0.998393,0.999994,0.998387,0.641721,0.982154,1,1,0.999999,1,1,1,0.999658,0.999966,0.999999,1,1,1,0.992562,0.999848,1,1,1,0.999883,0.999862,1,1,1,1,1,1,0.980016,1,0.998404,1,0.999926,1,1,0.999999,0.999919,1,1,1,1,0.995476,1,0.999998,0.999251,0.999999,0.999996,1,1,0.998339,1,1,1,1,1,1,1,0.985065,0.999969,1,0.999708,1,0.999871,0.999998,0.9997,0.999986,1,1,1,0.999983,1,1,0.999995,1,1,1,1,1,1,1,0.997722,1,1,1,1,1,0.999981,1,0.999998,1,1,0.999998,1,1,0.998858,1,1,0.999995,0.999667,1,0.999999,1,1,1,0.998879,1,1,1,0.999997,1,1,1,1,1,1,1,1,1,1,0.999998,0.99999,1,0.99907,1,1,1,0.98018,1,0.999984,0.527789,0.999786,0.999987,1,0.999957,1,1,1,0.997334,1,1,1,0.888491,1,1,1,1,1,1,1,0.158166,1,1,1,1,1.84883e-18,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,5.17641e-125,7.71137e-26,1,1,1,1,1,1,1,1,1,1,0.999982,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999917,0.999985,1,1,1,1,1,1,0.967619,1,1,1,1,1,1,1,1,1,0.999997,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,1,0.999899,1,1,1,1,1,1,1,1,1,1,0.999812,0.999994,0.999741,0.999993,0.999996,1,1,1,1,1,1,1,1,0.999877,1,1,0.999996,0.999988,1,0.000305107,1,0.990729,0.000167023,1,1,0.785075,0.259906,1,7.36029e-43,1,1,1,1,0.999279,0.635645,1,1,1,1,1,0.999976,0.000507048,0.999981,3.98374e-60,1,1,1,1,1,1,0.999733,1,1,1,1,1,1,0.999996,1,0.946697,1,1,1,0.713391,1,1,1,0.996722,1,0.997319,0.999498,1,1,0.999978,0.999993,1,1,0.999998,0.999057,1,1,1,0.977835,0.999996,1,1,1,0.999411,1,1,0.999945,1,0.99996,0.995263,0.998877,0.999965,1,0.999961,1,0.999998,1,1,0.9984,3.15033e-92,1,0.998056,0.999983,1,1,0.999998,1,1,0.995365,1,1,0.997768,0.999999,0.999993,0.999995,1,1,1,0.999999,1,0.996646,4.16592e-118,0.998484,1,0.999999,1,1,1,1,1,0.999991,0.999988,1,1,0.999996,0.999987,1,0.999998,0.999963,0.999998,1,1,1,1,0.999999,1,0.999998,0.999999,0.999998,0.999999,1,0.999872,1,1,1,1,1,1,1,1,1,1,0.999971,0.998595,1,0.999925,1,1,0.999967,1,1,0.999127,0.999999,1,1,1,2.01997e-36,1,0.999921,9.41969e-22,0.999992,0.996578,0.999893,1,1,0.999927,1,0.998355,1,1,0.999478,1,0.999444,0.999931,1,0.999981,1,1,1,0.967081,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999994,0.999627,1,1,0.999993,1,1,1,1,1,1,1,1,0.999991,1,1,1,1,1,1,1,1,1,1,1,0.999993,1,0.990563,1,0.999715,1,0.997099,1,0.999801,1,1,1,1,0.999998,1,1,1,1,1,1,0.9959,1,1,0.996657,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.010553,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.967949,1,1,1,1,1,1,1,1,1,1,1,1,1,7.31304e-53,1,1,1,1,1,1,1,1,0.99985,1,1,1,1,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,0.997801,1,1,1,1,1,1,1,1,0.999921,1,1,1,1,1,1,1,0.999999,1,1,1,9.16395e-06,1,0.999998,1,1,1,1,1,0.999988,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,1,1,1,1,1,1,1,1,0.999607,1,1,0.993153,1,1,1,0.999994,1,1,1,1,1,1,0.999889,0.999989,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999999,1,0.999813,1,0.999996,1,1,1,0.999735,1,1,1,1,0.999983,1,1,1,1,1,1,1,1,0.999571,0.999996,0.999986,0.997837,1,1,1,1,0.999852,0.999999,1,0.999998,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.998872,1,1,1,1,1,1.22361e-259,1,1,0.99995,1,1,1,1,1,1,1,0.999633,1,1,1,1,1,0.999759,1,1,1,1,0.99995,1,1,0.998521,0.999929,1,0.999616,0.999752,0.999928,1,1,1,1,1,1,0.998456,0.999998,0.999404,1,0.999994,0.999998,0.998782,1,1,1,0.999992,0.998919,1,0.987105,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,1,0.999996,1,1,1,0.999997,1,1,1,1,1,0.999965,1,0.999999,1,1,1,1,1,1,1
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}}
}}

Revision as of 13:05, 26 November 2012


Full id: C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma



Phase1 CAGE Peaks

Hg19::chr10:112092238..112092244,+p@chr10:112092238..112092244
+
Hg19::chr10:120518956..120518964,-p@chr10:120518956..120518964
-
Hg19::chr10:120543321..120543328,+p@chr10:120543321..120543328
+
Hg19::chr10:122794003..122794008,-p@chr10:122794003..122794008
-
Hg19::chr10:123737306..123737313,-p@chr10:123737306..123737313
-
Hg19::chr10:124639597..124639599,-p3@CUZD1
p3@FAM24B
Hg19::chr10:124768217..124768228,-p2@IKZF5
Hg19::chr10:27195771..27195778,+p@chr10:27195771..27195778
+
Hg19::chr10:31191066..31191082,-p@chr10:31191066..31191082
-
Hg19::chr10:31218537..31218558,-p@chr10:31218537..31218558
-
Hg19::chr10:47031842..47031850,+p@chr10:47031842..47031850
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Hg19::chr10:48656799..48656821,-p@chr10:48656799..48656821
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Hg19::chr10:60207445..60207451,-p@chr10:60207445..60207451
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Hg19::chr10:64041162..64041170,+p@chr10:64041162..64041170
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Hg19::chr10:71921185..71921194,-p@chr10:71921185..71921194
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Hg19::chr10:71921983..71922014,-p11@SAR1A
Hg19::chr10:71922082..71922091,-p13@SAR1A
Hg19::chr10:81088686..81088700,+p@chr10:81088686..81088700
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Hg19::chr10:82075969..82075974,+p@chr10:82075969..82075974
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Hg19::chr10:82118815..82118820,-p@chr10:82118815..82118820
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Hg19::chr10:82303799..82303804,+p@chr10:82303799..82303804
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Hg19::chr10:82346468..82346472,+p@chr10:82346468..82346472
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Hg19::chr10:90777922..90777930,-p@chr10:90777922..90777930
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Hg19::chr10:92591332..92591337,-p@chr10:92591332..92591337
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Hg19::chr10:95605772..95605777,+p@chr10:95605772..95605777
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Hg19::chr11:116980715..116980720,-p@chr11:116980715..116980720
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Hg19::chr11:11863649..11863660,+p9@USP47
Hg19::chr11:118877609..118877612,+p@chr11:118877609..118877612
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Hg19::chr11:122933691..122933706,-p16@HSPA8
Hg19::chr11:129892329..129892334,+p1@BX648817
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Hg19::chr11:34012712..34012718,+p@chr11:34012712..34012718
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Hg19::chr11:42896529..42896535,+p@chr11:42896529..42896535
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Hg19::chr11:43942607..43942622,+p1@ENST00000528226
Hg19::chr11:60618196..60618216,+p@chr11:60618196..60618216
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Hg19::chr11:62649322..62649383,+p7@SLC3A2
Hg19::chr11:62649386..62649403,+p14@SLC3A2
Hg19::chr11:62649426..62649443,+p11@SLC3A2
Hg19::chr11:6624785..6624800,-p3@RRP8
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Hg19::chr11:67244387..67244393,+p@chr11:67244387..67244393
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Hg19::chr11:96507334..96507340,+p@chr11:96507334..96507340
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Hg19::chr11:9780997..9781000,-p7@LOC440028
Hg19::chr11:9781031..9781042,-p5@LOC440028
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Hg19::chr12:106627581..106627586,+p@chr12:106627581..106627586
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Hg19::chr12:108154309..108154359,-p6@PRDM4
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Hg19::chr12:123160718..123160723,-p@chr12:123160718..123160723
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Hg19::chr12:123898207..123898212,-p@chr12:123898207..123898212
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Hg19::chr12:133516287..133516292,+p@chr12:133516287..133516292
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Hg19::chr12:19678536..19678551,+p@chr12:19678536..19678551
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Hg19::chr12:25840296..25840301,+p@chr12:25840296..25840301
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Hg19::chr12:296753..296755,-p@chr12:296753..296755
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Hg19::chr12:3278109..3278123,+p@chr12:3278109..3278123
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Hg19::chr12:38836738..38836744,+p@chr12:38836738..38836744
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Hg19::chr12:43004285..43004290,-p@chr12:43004285..43004290
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Hg19::chr12:49524045..49524086,-p3@TUBA1B
Hg19::chr12:49524087..49524122,-p5@TUBA1B
Hg19::chr12:49646975..49646981,+p@chr12:49646975..49646981
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Hg19::chr12:56583598..56583612,+p@chr12:56583598..56583612
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Hg19::chr12:57623787..57623800,+p27@SHMT2
Hg19::chr12:57624059..57624066,+p34@SHMT2
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Hg19::chr12:6299583..6299590,-p@chr12:6299583..6299590
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Hg19::chr12:68112445..68112448,-p@chr12:68112445..68112448
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Hg19::chr12:6818233..6818241,+p@chr12:6818233..6818241
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Hg19::chr12:6826147..6826153,+p@chr12:6826147..6826153
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Hg19::chr12:7145673..7145679,+p@chr12:7145673..7145679
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Hg19::chr12:72579863..72579866,+p@chr12:72579863..72579866
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Hg19::chr12:79947076..79947082,-p@chr12:79947076..79947082
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Hg19::chr12:79956344..79956348,+p@chr12:79956344..79956348
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Hg19::chr12:8015610..8015616,+p@chr12:8015610..8015616
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Hg19::chr12:95851792..95851796,-p@chr12:95851792..95851796
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Hg19::chr12:96503688..96503694,+p@chr12:96503688..96503694
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Hg19::chr13:111474451..111474458,+p1@uc001vrj.1
Hg19::chr13:112893976..112893982,+p@chr13:112893976..112893982
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Hg19::chr13:21313490..21313494,-p@chr13:21313490..21313494
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Hg19::chr13:23702817..23702823,+p@chr13:23702817..23702823
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Hg19::chr13:23716994..23716999,+p@chr13:23716994..23716999
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Hg19::chr13:28321718..28321723,-p@chr13:28321718..28321723
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Hg19::chr13:31752192..31752197,+p@chr13:31752192..31752197
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Hg19::chr13:33933242..33933248,+p@chr13:33933242..33933248
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Hg19::chr13:37575548..37575558,+p7@EXOSC8
Hg19::chr13:37575605..37575619,+p4@EXOSC8
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Hg19::chr13:53401063..53401068,+p@chr13:53401063..53401068
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Hg19::chr13:67196911..67196916,+p@chr13:67196911..67196916
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Hg19::chr13:71662460..71662466,+p@chr13:71662460..71662466
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Hg19::chr13:78049022..78049029,-p@chr13:78049022..78049029
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Hg19::chr13:80852192..80852197,-p@chr13:80852192..80852197
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Hg19::chr13:98728124..98728132,-p@chr13:98728124..98728132
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Hg19::chr14:102156376..102156380,+p@chr14:102156376..102156380
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Hg19::chr14:102583778..102583785,+p@chr14:102583778..102583785
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Hg19::chr14:102600656..102600660,-p@chr14:102600656..102600660
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Hg19::chr14:102765041..102765048,+p@chr14:102765041..102765048
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Hg19::chr14:104267949..104267968,-p@chr14:104267949..104267968
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Hg19::chr14:105217167..105217171,-p@chr14:105217167..105217171
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Hg19::chr14:106015432..106015439,+p@chr14:106015432..106015439
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Hg19::chr14:20869245..20869255,-p@chr14:20869245..20869255
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Hg19::chr14:20869297..20869328,-p@chr14:20869297..20869328
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Hg19::chr14:20869347..20869354,-p@chr14:20869347..20869354
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Hg19::chr14:24657573..24657598,+p@chr14:24657573..24657598
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Hg19::chr14:32181292..32181299,-p@chr14:32181292..32181299
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Hg19::chr14:52589789..52589795,+p@chr14:52589789..52589795
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Hg19::chr14:54910759..54910764,+p@chr14:54910759..54910764
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Hg19::chr14:56306964..56306971,+p@chr14:56306964..56306971
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Hg19::chr14:65669745..65669753,+p@chr14:65669745..65669753
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Hg19::chr14:71721853..71721858,+p@chr14:71721853..71721858
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Hg19::chr14:74056808..74056814,-p@chr14:74056808..74056814
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Hg19::chr14:77002640..77002645,-p@chr14:77002640..77002645
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Hg19::chr14:77172660..77172667,-p@chr14:77172660..77172667
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Hg19::chr14:78479792..78479797,-p@chr14:78479792..78479797
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Hg19::chr14:82089422..82089428,-p1@ENST00000554211
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Hg19::chr14:92045291..92045298,+p@chr14:92045291..92045298
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Hg19::chr15:102137828..102137836,+p@chr15:102137828..102137836
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Hg19::chr15:33311248..33311255,-p@chr15:33311248..33311255
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Hg19::chr15:41254685..41254691,+p@chr15:41254685..41254691
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Hg19::chr15:62478282..62478287,-p@chr15:62478282..62478287
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Hg19::chr15:65592968..65592974,-p2@PARP16
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Hg19::chr15:72565054..72565059,-p@chr15:72565054..72565059
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Hg19::chr15:72565087..72565115,-p@chr15:72565087..72565115
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Hg19::chr15:72565125..72565150,-p@chr15:72565125..72565150
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Hg19::chr15:74024086..74024093,-p@chr15:74024086..74024093
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Hg19::chr15:74266915..74266918,+p@chr15:74266915..74266918
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Hg19::chr15:74345786..74345807,+p@chr15:74345786..74345807
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Hg19::chr15:76629007..76629012,+p4@ISL2
Hg19::chr15:79140003..79140009,+p6@MORF4L1
Hg19::chr15:80219257..80219260,+p@chr15:80219257..80219260
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Hg19::chr15:81451911..81451917,+p11@IL16
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Hg19::chr15:89574441..89574448,-p@chr15:89574441..89574448
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Hg19::chr15:89683329..89683341,+p@chr15:89683329..89683341
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Hg19::chr15:96103231..96103240,-p@chr15:96103231..96103240
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Hg19::chr16:16198084..16198091,-p@chr16:16198084..16198091
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Hg19::chr16:1823455..1823488,-p4@MRPS34
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Hg19::chr16:21000433..21000438,-p@chr16:21000433..21000438
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Hg19::chr16:21164864..21164874,+p@chr16:21164864..21164874
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Hg19::chr16:21301464..21301470,+p@chr16:21301464..21301470
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Hg19::chr16:25069852..25069857,-p@chr16:25069852..25069857
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Hg19::chr16:29275902..29275939,-p@chr16:29275902..29275939
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Hg19::chr16:31276917..31276958,+p@chr16:31276917..31276958
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Hg19::chr16:47984986..47984991,+p@chr16:47984986..47984991
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Hg19::chr16:67008972..67008977,+p@chr16:67008972..67008977
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Hg19::chr16:68016940..68016944,+p@chr16:68016940..68016944
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Hg19::chr16:86587677..86587716,+p@chr16:86587677..86587716
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Hg19::chr16:87887280..87887293,-p@chr16:87887280..87887293
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Hg19::chr17:12125154..12125159,+p@chr17:12125154..12125159
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Hg19::chr17:30059110..30059117,+p@chr17:30059110..30059117
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Hg19::chr17:30089454..30089461,+p@chr17:30089454..30089461
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Hg19::chr17:33895183..33895192,+p@chr17:33895183..33895192
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Hg19::chr17:34205596..34205624,-p@chr17:34205596..34205624
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Hg19::chr17:34205650..34205655,-p@chr17:34205650..34205655
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Hg19::chr17:37356586..37356612,+p3@RPL19
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Hg19::chr17:38533091..38533096,+p@chr17:38533091..38533096
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Hg19::chr17:38975423..38975442,+p2@TMEM99
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Hg19::chr17:40264680..40264687,-p10@DHX58
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Hg19::chr17:42219331..42219355,+p3@C17orf53
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Hg19::chr17:58691931..58691936,+p@chr17:58691931..58691936
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Hg19::chr17:66048776..66048781,+p@chr17:66048776..66048781
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Hg19::chr17:66096368..66096375,+p@chr17:66096368..66096375
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Hg19::chr17:73873471..73873517,+p@chr17:73873471..73873517
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Hg19::chr17:7464541..7464572,+p@chr17:7464541..7464572
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Hg19::chr19:46242915..46242933,+p1@LOC388553
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Hg19::chr19:49258775..49258786,+p2@FGF21
Hg19::chr19:49258859..49258870,+p3@FGF21
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Hg19::chr19:8444480..8444485,+p@chr19:8444480..8444485
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Hg19::chr19:8444800..8444818,+p@chr19:8444800..8444818
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Hg19::chr19:8452853..8452863,+p@chr19:8452853..8452863
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Hg19::chr19:9393555..9393564,-p@chr19:9393555..9393564
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Hg19::chr19:9659416..9659424,+p@chr19:9659416..9659424
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Hg19::chr1:11159592..11159597,+p4@ENST00000435388
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Hg19::chr1:151254469..151254483,-p3@ENST00000447795
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Hg19::chr1:160604588..160604598,-p@chr1:160604588..160604598
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Hg19::chr1:16694746..16694749,+p@chr1:16694746..16694749
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Hg19::chr1:181015790..181015795,+p@chr1:181015790..181015795
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Hg19::chr1:188827858..188827863,+p@chr1:188827858..188827863
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Hg19::chr1:203903420..203903437,+p@chr1:203903420..203903437
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Hg19::chr1:205264274..205264298,-p@chr1:205264274..205264298
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Hg19::chr1:211402420..211402426,+p@chr1:211402420..211402426
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Hg19::chr1:212063644..212063649,+p@chr1:212063644..212063649
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Hg19::chr1:220292518..220292528,-p@chr1:220292518..220292528
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Hg19::chr1:225620131..225620138,+p@chr1:225620131..225620138
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Hg19::chr1:228290095..228290116,-p@chr1:228290095..228290116
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Hg19::chr1:233006777..233006784,-p@chr1:233006777..233006784
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Hg19::chr1:240087588..240087592,-p@chr1:240087588..240087592
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Hg19::chr1:24069642..24069646,+p5@TCEB3
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Hg19::chr1:2730620..2730627,+p@chr1:2730620..2730627
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Hg19::chr1:29457191..29457198,-p@chr1:29457191..29457198
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Hg19::chr1:39734819..39734828,+p@chr1:39734819..39734828
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Hg19::chr1:39734841..39734851,+p@chr1:39734841..39734851
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Hg19::chr1:41023512..41023518,-p@chr1:41023512..41023518
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Hg19::chr1:45196960..45196987,-p@chr1:45196960..45196987
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Hg19::chr1:45241352..45241359,+p4@RPS8
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Hg19::chr1:59090089..59090095,+p@chr1:59090089..59090095
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Hg19::chr1:64972270..64972278,+p@chr1:64972270..64972278
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Hg19::chr1:88101316..88101319,-p@chr1:88101316..88101319
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Hg19::chr1:90449754..90449760,-p@chr1:90449754..90449760
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Hg19::chr1:934985..934997,-p9@HES4
Hg19::chr1:936069..936101,-p@chr1:936069..936101
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Hg19::chr1:936318..936336,+p@chr1:936318..936336
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Hg19::chr1:952959..952965,-p@chr1:952959..952965
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Hg19::chr1:9747451..9747467,-p5@uc001aqd.2
Hg19::chr20:1221512..1221516,+p@chr20:1221512..1221516
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Hg19::chr20:13765507..13765517,-p5@ESF1
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Hg19::chr20:20750248..20750253,+p@chr20:20750248..20750253
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Hg19::chr20:23716596..23716602,+p@chr20:23716596..23716602
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Hg19::chr20:23792487..23792494,+p@chr20:23792487..23792494
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Hg19::chr20:30135170..30135241,+p2@HM13
Hg19::chr20:30135258..30135269,+p4@HM13
Hg19::chr20:3184655..3184688,-p@chr20:3184655..3184688
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Hg19::chr20:39538537..39538543,-p@chr20:39538537..39538543
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Hg19::chr20:39540611..39540617,+p@chr20:39540611..39540617
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Hg19::chr20:42286235..42286249,+p@chr20:42286235..42286249
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Hg19::chr20:43665028..43665052,+p@chr20:43665028..43665052
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Hg19::chr20:43988581..43988588,+p@chr20:43988581..43988588
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Hg19::chr20:44721463..44721471,+p@chr20:44721463..44721471
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Hg19::chr20:46688438..46688444,+p@chr20:46688438..46688444
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Hg19::chr20:47180157..47180163,-p@chr20:47180157..47180163
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Hg19::chr20:55924311..55924317,+p@chr20:55924311..55924317
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Hg19::chr20:62432859..62432865,+p@chr20:62432859..62432865
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Hg19::chr21:17567375..17567387,+p@chr21:17567375..17567387
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Hg19::chr21:17567393..17567404,+p@chr21:17567393..17567404
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Hg19::chr21:27151440..27151444,+p@chr21:27151440..27151444
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Hg19::chr21:29257312..29257316,-p@chr21:29257312..29257316
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Hg19::chr21:30157153..30157159,+p@chr21:30157153..30157159
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Hg19::chr21:30364948..30364962,-p@chr21:30364948..30364962
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Hg19::chr21:30373296..30373301,+p@chr21:30373296..30373301
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Hg19::chr21:33027237..33027243,+p@chr21:33027237..33027243
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Hg19::chr21:37693087..37693102,-p@chr21:37693087..37693102
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Hg19::chr21:43083488..43083503,+p@chr21:43083488..43083503
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Hg19::chr21:43832289..43832298,+p@chr21:43832289..43832298
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Hg19::chr21:44299212..44299278,+p4@NDUFV3
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Hg19::chr22:18535521..18535528,-p@chr22:18535521..18535528
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Hg19::chr22:18624067..18624072,+p@chr22:18624067..18624072
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Hg19::chr22:18639119..18639125,+p@chr22:18639119..18639125
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Hg19::chr22:19028616..19028628,-p5@DGCR2
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Hg19::chr22:22292942..22292967,-p4@PPM1F
Hg19::chr22:23358662..23358667,-p@chr22:23358662..23358667
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Hg19::chr22:30993827..30993833,+p1@ENST00000432130
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Hg19::chr22:36727653..36727660,-p@chr22:36727653..36727660
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Hg19::chr22:36727693..36727704,-p@chr22:36727693..36727704
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Hg19::chr22:39712867..39712899,-p1@RNU86
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Hg19::chr22:42017459..42017477,+p9@XRCC6
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Hg19::chr22:42342943..42342962,+p@chr22:42342943..42342962
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Hg19::chr22:42487125..42487138,+p6@ENST00000417327
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Hg19::chr22:43366203..43366214,-p@chr22:43366203..43366214
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Hg19::chr22:45271355..45271359,-p@chr22:45271355..45271359
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Hg19::chr22:47187602..47187614,+p@chr22:47187602..47187614
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Hg19::chr22:50063053..50063059,-p@chr22:50063053..50063059
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Hg19::chr2:101359449..101359468,-p@chr2:101359449..101359468
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Hg19::chr2:10232601..10232606,+p@chr2:10232601..10232606
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Hg19::chr2:120755355..120755358,+p@chr2:120755355..120755358
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Hg19::chr2:134866451..134866458,-p@chr2:134866451..134866458
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Hg19::chr2:136288847..136288850,-p6@ZRANB3
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Hg19::chr2:163175088..163175101,-p4@IFIH1
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Hg19::chr2:166011683..166011721,-p@chr2:166011683..166011721
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Hg19::chr2:175573701..175573705,-p@chr2:175573701..175573705
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Hg19::chr2:178701304..178701311,+p@chr2:178701304..178701311
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Hg19::chr2:198455678..198455684,-p@chr2:198455678..198455684
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Hg19::chr2:201040237..201040241,+p@chr2:201040237..201040241
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Hg19::chr2:206842734..206842739,+p@chr2:206842734..206842739
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Hg19::chr2:220178311..220178317,+p@chr2:220178311..220178317
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Hg19::chr2:225521350..225521355,+p@chr2:225521350..225521355
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Hg19::chr2:228186552..228186557,+p@chr2:228186552..228186557
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Hg19::chr2:234932283..234932289,-p@chr2:234932283..234932289
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Hg19::chr2:23526928..23526933,-p@chr2:23526928..23526933
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Hg19::chr2:32029538..32029543,+p@chr2:32029538..32029543
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Hg19::chr2:38625138..38625142,+p@chr2:38625138..38625142
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Hg19::chr2:40899393..40899396,+p@chr2:40899393..40899396
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Hg19::chr2:54857119..54857146,-p@chr2:54857119..54857146
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Hg19::chr2:54857199..54857209,-p@chr2:54857199..54857209
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Hg19::chr2:5938563..5938571,+p@chr2:5938563..5938571
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Hg19::chr2:71319046..71319051,-p@chr2:71319046..71319051
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Hg19::chr2:85560913..85560918,-p@chr2:85560913..85560918
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Hg19::chr2:9042999..9043004,-p@chr2:9042999..9043004
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Hg19::chr2:98756294..98756310,+p@chr2:98756294..98756310
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Hg19::chr3:119056364..119056370,-p@chr3:119056364..119056370
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Hg19::chr3:120009490..120009496,+p@chr3:120009490..120009496
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Hg19::chr3:126774396..126774402,-p@chr3:126774396..126774402
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Hg19::chr3:126794530..126794537,-p@chr3:126794530..126794537
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Hg19::chr3:133788694..133788698,-p@chr3:133788694..133788698
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Hg19::chr3:14079544..14079549,+p@chr3:14079544..14079549
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Hg19::chr3:151871166..151871172,+p@chr3:151871166..151871172
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Hg19::chr3:152873087..152873093,-p1@BC034800
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Hg19::chr3:155759920..155759926,+p@chr3:155759920..155759926
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Hg19::chr3:155770710..155770714,+p@chr3:155770710..155770714
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Hg19::chr3:170046227..170046231,+p@chr3:170046227..170046231
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Hg19::chr3:29514353..29514360,-p@chr3:29514353..29514360
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Hg19::chr3:31912598..31912603,+p@chr3:31912598..31912603
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Hg19::chr3:32668126..32668134,+p@chr3:32668126..32668134
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Hg19::chr3:37275339..37275344,+p@chr3:37275339..37275344
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Hg19::chr3:45349152..45349157,+p@chr3:45349152..45349157
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Hg19::chr3:57434343..57434350,-p@chr3:57434343..57434350
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Hg19::chr3:69504417..69504419,+p@chr3:69504417..69504419
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Hg19::chr3:70661939..70661944,+p@chr3:70661939..70661944
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Hg19::chr3:75033704..75033709,-p@chr3:75033704..75033709
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p5@ENST00000523806
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Hg19::chr8:6247698..6247703,+p@chr8:6247698..6247703
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Hg19::chr8:64075907..64075913,+p@chr8:64075907..64075913
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Hg19::chrX:126529055..126529062,+p@chrX:126529055..126529062
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Hg19::chrX:126796505..126796513,-p1@BC040595
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Hg19::chrX:133282719..133282722,+p@chrX:133282719..133282722
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Hg19::chrX:136004498..136004504,+p@chrX:136004498..136004504
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Hg19::chrX:32470298..32470305,-p@chrX:32470298..32470305
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Hg19::chrX:49927164..49927170,-p@chrX:49927164..49927170
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Hg19::chrX:70748691..70748696,-p@chrX:70748691..70748696
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Hg19::chrX:73051845..73051849,-p@chrX:73051845..73051849
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Hg19::chrX:74392787..74392789,-p@chrX:74392787..74392789
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Hg19::chrX:88000910..88000918,-p@chrX:88000910..88000918
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Hg19::chrX:89777122..89777128,+p@chrX:89777122..89777128
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Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

p.valueFDRnGenesnPathwayName
0.0001085363572843420.0238823869374849492Ribosome (KEGG):03010
0.0001131866679501650.0238823869374849493Cytoplasmic Ribosomal Proteins (Wikipathways):WP477
0.000378796645274030.0479556552916922211Signaling by VEGF (Reactome):REACT_12529
0.0002479967093774880.03924547925898754114Regulation of beta-cell development (Reactome):REACT_13698
4.08210231317272e-050.02388238693748495143Influenza Infection (Reactome):REACT_6167



Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data

GO IDGO nameFDR corrected p-value
GO:0044424intracellular part0.000118251118478727
GO:0044237cellular metabolic process0.000118251118478727
GO:0043229intracellular organelle0.000118251118478727
GO:0043226organelle0.000118251118478727
GO:0043231intracellular membrane-bound organelle0.000264921640815833
GO:0043227membrane-bound organelle0.000264921640815833
GO:0005634nucleus0.000264921640815833
GO:0043283biopolymer metabolic process0.000436316018510323
GO:0005622intracellular0.000454795999831926
GO:0003677DNA binding0.000638329673173698
GO:0003676nucleic acid binding0.000680990050141197
GO:0050789regulation of biological process0.000959069478515697
GO:0019219regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process0.00169134958778105
GO:0050794regulation of cellular process0.00222394499945679
GO:0044238primary metabolic process0.00261868380308172
GO:0019222regulation of metabolic process0.00261868380308172
GO:0010467gene expression0.00261868380308172
GO:0043170macromolecule metabolic process0.00288656026368036
GO:0031323regulation of cellular metabolic process0.00368743257469057
GO:0050930induction of positive chemotaxis0.00385761371356052
GO:0045449regulation of transcription0.00385761371356052
GO:0006355regulation of transcription, DNA-dependent0.00385761371356052
GO:0065007biological regulation0.00450793968205722
GO:0003723RNA binding0.00461241352901987
GO:0050926regulation of positive chemotaxis0.00461241352901987
GO:0050927positive regulation of positive chemotaxis0.00461241352901987
GO:0050918positive chemotaxis0.00461241352901987
GO:0006351transcription, DNA-dependent0.00461241352901987
GO:0032774RNA biosynthetic process0.00461241352901987
GO:0050921positive regulation of chemotaxis0.00507701195539429
GO:0048010vascular endothelial growth factor receptor signaling pathway0.00507701195539429
GO:0006350transcription0.00530438430267921
GO:0050920regulation of chemotaxis0.00532145601135416
GO:0004386helicase activity0.00532145601135416
GO:0010468regulation of gene expression0.00532145601135416
GO:0016070RNA metabolic process0.00532145601135416
GO:0006139nucleobase, nucleoside, nucleotide and nucleic acid metabolic process0.00532145601135416
GO:0005515protein binding0.00818749528637169
GO:0005830cytosolic ribosome (sensu Eukaryota)0.00902551579835063
GO:0044464cell part0.0111103756860159
GO:0048522positive regulation of cellular process0.0128505742145479
GO:0006512ubiquitin cycle0.0156105322851209
GO:0048518positive regulation of biological process0.024311547562387
GO:0032003interleukin-28 receptor binding0.0297058361788139
GO:0032023trypsinogen activation0.0297058361788139
GO:0045345positive regulation of MHC class I biosynthetic process0.0297058361788139
GO:0004595pantetheine-phosphate adenylyltransferase activity0.0297058361788139
GO:0004140dephospho-CoA kinase activity0.0297058361788139
GO:0005843cytosolic small ribosomal subunit (sensu Eukaryota)0.0317741409504344
GO:0045941positive regulation of transcription0.0369311487256354
GO:0045935positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process0.0410791181765393
GO:0046475glycerophospholipid catabolic process0.0499800720172071
GO:0008106alcohol dehydrogenase (NADP+) activity0.0499800720172071
GO:0045343regulation of MHC class I biosynthetic process0.0499800720172071
GO:0045341MHC class I biosynthetic process0.0499800720172071
GO:0000281cytokinesis after mitosis0.0499800720172071
GO:0006931substrate-bound cell migration, cell attachment to substrate0.0499800720172071



Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br>cell_data<br>uberon_data<br><br>

Cell Type
Ontology termp-valuen
antibody secreting cell4.22e-211
plasma cell4.22e-211
plasmablast4.22e-211
mature B cell3.02e-112
pre-B-II cell3.02e-112
transitional stage B cell3.02e-112
small pre-B-II cell3.02e-112
immature B cell3.02e-112
precursor B cell6.34e-083
Uber Anatomy
Ontology termp-valuen
testis5.15e-118
male reproductive organ2.92e-0811


Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs



JASPAR motifs

Motifs-log10(p-value)

{{{tfbs_overrepresentation_jaspar}}}



ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data

(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)

TF#promotersEnrichmentp-valueq-value
JUNB#3726411.615232868793650.002191040736007090.0126327759427981
MAFF#23764292.101860152134380.0001966750162071570.00236342676535028
MAFK#7975471.639297886072080.0008007523028816570.00611552246878664
NFYA#480042410.05462833555753.10234688467927e-3182.94550914803707e-314
NFYB#48013587.722015424409336.4969602989265e-2213.57124229820834e-217



Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data

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