NonredundantMotifs:159

Representative Motif

<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.

• Name :known159
• db :HOCOMOCO
• Id :PURA_f1
• name  :
• score :3.9404484733511236
  
• External refs:

EntrezGene:5813
UniProt:5813

• Internal refs:

EntrezGene:5813

Motif matrix

P0 A C G T 1 2.068181818181817 1.1489898989898992 8.633838383838382 1.1489898989898992 2 1.9696969696969628 0.7878787878787878 10.242424242424244 0.0 3 6.6969696969696955 0.0 1.9696969696969628 4.333333333333329 4 5.515151515151512 2.4949494949494957 3.9393939393939386 1.0505050505050504 5 0.9191919191919191 0.0 6.6969696969696955 5.383838383838381 6 0.9191919191919191 1.838383838383833 6.040404040404045 4.202020202020199 7 0.0 1.9696969696969628 8.141414141414138 2.8888888888888857 8 1.1818181818181817 0.0 9.979797979797983 1.838383838383833 9 2.757575757575756 1.9696969696969628 4.202020202020199 4.070707070707069 10 2.232323232323236 0.0 7.616161616161618 3.151515151515146 11 0.0 0.0 10.505050505050503 2.4949494949494957 12 0.9191919191919191 2.8888888888888857 7.878787878787877 1.313131313131313 13 2.1010101010101057 8.92929292929293 1.9696969696969628 0.0 14 5.646464646464642 3.020202020202016 4.333333333333329 0.0 15 0.9191919191919191 0.0 6.828282828282824 5.252525252525252 16 4.070707070707069 0.0 8.92929292929293 0.0 17 0.45959595959595884 1.378787878787878 9.520202020202017 1.6414141414141379