NonredundantMotifs:151: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=4306
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MCR_f1
|name=known151
|representative_motif_db=HOCOMOCO
|representative_motif_id=MC...") |
m (Autoedit moved page NonredundantMotifs:Motif151 to NonredundantMotifs:151 without leaving a redirect: NSchange) |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;2.722222222222223;1.7222222222222219;0.722222222222221;1.833333333333334!2;4.888888888888887;0.0;0.0;2.1111111111111143!3;0.8888888888888891;0.0;6.111111111111111;0.0!4;2.888888888888891;0.0;2.0000000000000018;2.1111111111111143!5;3.22222222222222;2.888888888888891;0.8888888888888891;0.0!6;0.0;5.222222222222222;0.8888888888888891;0.8888888888888891!7;4.111111111111116;0.0;0.0;2.888888888888891!8;1.3888888888888862;1.166666666666669;4.166666666666665;0.2777777777777779!9;1.166666666666669;1.3888888888888862;4.166666666666665;0.2777777777777779!10;1.277777777777781;0.2777777777777779;0.2777777777777779;5.166666666666666!11;0.0;1.111111111111113;1.7777777777777781;4.111111111111116!12;1.111111111111113;0.0;5.888888888888894;0.0!13;3.111111111111108;0.0;0.0;3.888888888888892!14;2.0000000000000018;0.0;2.0000000000000018;3.000000000000003!15;0.0;2.1111111111111143;4.888888888888887;0.0!16;0.8888888888888891;0.0;2.0000000000000018;4.111111111111116!17;3.277777777777776;0.2777777777777779;2.277777777777775;1.166666666666669 | |||
|entrez_gene_id=4306 | |entrez_gene_id=4306 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:MCR_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:MCR_f1 | ||
|name= | |name=non-redundant151 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=MCR_f1 | |representative_motif_id=MCR_f1 | ||
Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] |
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant151
- db :HOCOMOCO
- Id :MCR_f1
- name :
- score :0.11283213043446465
- External refs:
- Internal refs:
Motif matrix | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members