NonredundantMotifs:155: Difference between revisions
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|entrez_gene_id=2303
|motif_cluster_2013_march_motif_members= /HOCOMOCO:FOXC2_f1
|name=known155
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;0.267857142857143;0.267857142857143;3.125;1.339285714285715!2;1.07142857142857;1.07142857142857;0.0;2.857142857142855!3;0.0;1.07142857142857;0.0;3.92857142857143!4;0.0;0.0;0.0;5.0!5;1.07142857142857;0.0;3.92857142857143;0.0!6;0.0;0.0;0.0;5.0!7;0.0;0.0;0.0;5.0!8;1.07142857142857;0.0;1.07142857142857;2.857142857142855!9;1.785714285714285;0.0;0.0;3.2142857142857153!10;0.0;1.785714285714285;3.2142857142857153;0.0!11;1.07142857142857;2.142857142857145;0.0;1.785714285714285!12;0.0;3.2142857142857153;0.0;1.785714285714285!13;5.0;0.0;0.0;0.0!14;0.0;0.714285714285715;4.285714285714285;0.0!15;2.4107142857142847;0.267857142857143;1.339285714285715;0.982142857142855 | |||
|entrez_gene_id=2303 | |entrez_gene_id=2303 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:FOXC2_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:FOXC2_f1 | ||
|name= | |name=non-redundant155 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=FOXC2_f1 | |representative_motif_id=FOXC2_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant155
- db :HOCOMOCO
- Id :FOXC2_f1
- name :
- score :0.1470267923943343
- External refs:
- Internal refs:
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Sub Motif Members
