NonredundantMotifs:185: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=7050
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TGIF1_f1
|name=known185
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;2.467741935483878;1.4806451612903269;2.467741935483878;6.525806451612916!2;0.9870967741935512;0.0;10.967741935483897;0.9870967741935512!3;0.9870967741935512;0.0;3.948387096774205;8.006451612903243!4;0.0;7.896774193548397;4.058064516129038;0.9870967741935512!5;9.980645161290346;0.9870967741935512;0.0;1.9741935483871025!6;1.9741935483871025;2.0838709677419356;6.909677419354859;1.9741935483871025!7;1.9741935483871025;2.0838709677419356;6.909677419354859;1.9741935483871025!8;2.9612903225806537;0.0;0.0;9.980645161290346!9;0.9870967741935512;1.9741935483871025;9.980645161290346;0.0!10;2.9612903225806537;0.0;1.9741935483871025;8.006451612903243!11;0.0;8.883870967741947;2.0838709677419356;1.9741935483871025!12;8.993548387096794;0.0;3.948387096774205;0.0!13;1.9741935483871025;5.045161290322589;3.948387096774205;1.9741935483871025!14;0.9870967741935512;8.006451612903243;1.9741935483871025;1.9741935483871025!15;2.9612903225806537;1.9741935483871025;1.9741935483871025;6.0322580645161405!16;1.4806451612903269;2.467741935483878;5.538709677419365;3.4548387096774293 | |||
|entrez_gene_id=7050 | |entrez_gene_id=7050 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:TGIF1_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:TGIF1_f1 | ||
|name= | |name=non-redundant185 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=TGIF1_f1 | |representative_motif_id=TGIF1_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant185
- db :HOCOMOCO
- Id :TGIF1_f1
- name :
- score :0.14640978168080532
- External refs:
- Internal refs:
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Sub Motif Members
