NonredundantMotifs:193: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{Known_motif
|entrez_gene_id=79365
|motif_cluster_2013_march_motif_members= /HOCOMOCO:BHE41_f1
|name=known193
|representative_motif_db=HOCOMOCO
|representative_motif_id...") |
m (Autoedit moved page NonredundantMotifs:Motif193 to NonredundantMotifs:193 without leaving a redirect: NSchange) |
||
| (6 intermediate revisions by 2 users not shown) | |||
| Line 1: | Line 1: | ||
{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;3.84020618556701;0.7474226804123709;1.67525773195876;3.73711340206186!2;0.0;5.87628865979382;4.12371134020619;0.0!3;2.98969072164948;3.0927835051546397;2.98969072164948;0.927835051546392!4;4.02061855670103;1.0309278350515498;4.94845360824742;0.0!5;1.0309278350515498;1.0309278350515498;4.12371134020619;3.8144329896907196!6;0.0;4.02061855670103;4.94845360824742;1.0309278350515498!7;0.0;4.94845360824742;0.0;5.051546391752581!8;0.0;10.0;0.0;0.0!9;7.113402061855671;0.0;1.95876288659794;0.927835051546392!10;2.06185567010309;5.97938144329897;0.927835051546392;1.0309278350515498!11;0.0;1.0309278350515498;8.04123711340206;0.927835051546392!12;0.0;0.0;0.0;10.0!13;0.0;0.0;10.0;0.0!14;3.0927835051546397;5.97938144329897;0.927835051546392;0.0!15;4.12371134020619;1.95876288659794;1.0309278350515498;2.8865979381443303!16;0.0;0.927835051546392;7.113402061855671;1.95876288659794!17;4.94845360824742;1.95876288659794;3.0927835051546397;0.0!18;4.02061855670103;0.927835051546392;4.02061855670103;1.0309278350515498!19;3.0927835051546397;1.0309278350515498;5.87628865979382;0.0!20;2.31958762886598;3.2474226804123703;3.2474226804123703;1.18556701030928 | |||
|entrez_gene_id=79365 | |entrez_gene_id=79365 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:BHE41_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:BHE41_f1 | ||
|name= | |name=non-redundant193 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=BHE41_f1 | |representative_motif_id=BHE41_f1 | ||
| Line 11: | Line 12: | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant193
- db :HOCOMOCO
- Id :BHE41_f1
- name :
- score :2.4300446971681233
- External refs:
- Internal refs:
| Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Sub Motif Members
