FFCP PHASE1:Hg19::chr16:12059091..12059102,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset=robustDPI | |||
|EntrezGene=608 | |EntrezGene=608 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11913 | |HGNC=11913 | ||
|TSSclassifier=S | |||
|UniProt=Q2TQ40 | |UniProt=Q2TQ40 | ||
|association_with_transcript=11bp_to_ENST00000396495_5end | |association_with_transcript=11bp_to_ENST00000396495_5end |
Revision as of 00:30, 7 July 2013
Short description: | p3@TNFRSF17 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TNFRSF17_5end |
Coexpression cluster: | C1196_lymphoma_CD19_diffuse_lymphangiectasia_B_xeroderma_b |
Association with transcript: | 11bp_to_ENST00000396495_5end |
EntrezGene: | TNFRSF17 |
HGNC: | 11913 |
UniProt: | Q2TQ40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@TNFRSF17 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 8.38e-87 | 24 |
pro-B cell | 8.38e-87 | 24 |
B cell | 3.94e-50 | 14 |
lymphocyte | 2.75e-41 | 53 |
common lymphoid progenitor | 2.75e-41 | 53 |
lymphoid lineage restricted progenitor cell | 6.59e-38 | 52 |
nongranular leukocyte | 1.49e-16 | 115 |
leukocyte | 6.13e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 5.56e-14 | 120 |
mature B cell | 1.15e-12 | 2 |
Showing 1 to 10 of 23 entries
Ontology term | p-value | n |
---|---|---|
spleen | 8.03e-09 | 3 |
gastrointestinal system mesentery | 8.03e-09 | 3 |
stomach region | 8.03e-09 | 3 |
mesentery | 8.03e-09 | 3 |
gastrointestinal system serosa | 8.03e-09 | 3 |
mesentery of stomach | 8.03e-09 | 3 |
gut mesentery | 8.03e-09 | 3 |
dorsal mesentery | 8.03e-09 | 3 |
dorsal mesogastrium | 8.03e-09 | 3 |
peritoneal cavity | 8.03e-09 | 3 |
Showing 1 to 10 of 21 entries
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.09e-09 | 10 |
bone marrow cancer | 2.23e-07 | 1 |
myeloma | 2.23e-07 | 1 |
genetic disease | 2.52e-07 | 1 |
monogenic disease | 2.52e-07 | 1 |
xeroderma pigmentosum | 2.52e-07 | 1 |
acute leukemia | 3.41e-07 | 1 |
lymphatic system cancer | 4.89e-07 | 1 |
lymphosarcoma | 4.89e-07 | 1 |
Showing 1 to 9 of 9 entries
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.